RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 POLR2KP53803 58 aaKnown RBP1.21□□□□□ -2.22
TOPBP1-206ENST00000508524 FAM231DQ6ZW35 169 aa1.21□□□□□ -2.22
TOPBP1-206ENST00000508524 SSBP3-AS1Q7Z2R9 100 aa1.21□□□□□ -2.22
TOPBP1-206ENST00000508524 FAM19A3Q7Z5A8 133 aa1.21□□□□□ -2.22
TOPBP1-206ENST00000508524 KRTAP8-1Q8IUC2 63 aa1.21□□□□□ -2.22
TOPBP1-206ENST00000508524 GNB1LQ9BYB4 327 aa1.21□□□□□ -2.22
TOPBP1-206ENST00000508524 KCNIP2Q9NS61 270 aa1.21□□□□□ -2.22
TOPBP1-206ENST00000508524 A0A0G2JQZ4 141 aa1.2□□□□□ -2.22
TOPBP1-206ENST00000508524 TRBV6-5A0A0K0K1A5 114 aa1.2□□□□□ -2.22
TOPBP1-206ENST00000508524 A0A1W2PRE2 83 aa1.2□□□□□ -2.22
TOPBP1-206ENST00000508524 C8orf87E5RJ46 101 aa1.2□□□□□ -2.22
TOPBP1-206ENST00000508524 C17orf112F2Z3M2 114 aa1.2□□□□□ -2.22
TOPBP1-206ENST00000508524 H7C2G1 150 aa1.2□□□□□ -2.22
TOPBP1-206ENST00000508524 RGS5O15539 181 aa1.2□□□□□ -2.22
TOPBP1-206ENST00000508524 SIX6O95475 246 aa1.2□□□□□ -2.22
TOPBP1-206ENST00000508524 KRTAP19-8Q3LI54 63 aa1.2□□□□□ -2.22
TOPBP1-206ENST00000508524 TOMM7Q9P0U1 55 aa1.2□□□□□ -2.22
TOPBP1-206ENST00000508524 V9GYH0 126 aa1.2□□□□□ -2.22
TOPBP1-206ENST00000508524 TRBV27A0A0K0K1C4 114 aa1.19□□□□□ -2.22
TOPBP1-206ENST00000508524 FAM236DA0A1B0GTK5 79 aa1.19□□□□□ -2.22
TOPBP1-206ENST00000508524 K7ERS5 55 aa1.19□□□□□ -2.22
TOPBP1-206ENST00000508524 TCAPO15273 167 aa1.19□□□□□ -2.22
TOPBP1-206ENST00000508524 FAM236CP0DP71 79 aa1.19□□□□□ -2.22
TOPBP1-206ENST00000508524 PVALBP20472 110 aaPredicted RBP1.19□□□□□ -2.22
TOPBP1-206ENST00000508524 UBE2G1P62253 170 aa1.19□□□□□ -2.22
TOPBP1-206ENST00000508524 HIST1H2BAQ96A08 127 aa1.19□□□□□ -2.22
TOPBP1-206ENST00000508524 FAM210AQ96ND0 272 aa1.19□□□□□ -2.22
TOPBP1-206ENST00000508524 Q9BRP9 147 aa1.19□□□□□ -2.22
TOPBP1-206ENST00000508524 MRPS26Q9BYN8 205 aaKnown RBP1.19□□□□□ -2.22
TOPBP1-206ENST00000508524 HSPB11Q9Y547 144 aa1.19□□□□□ -2.22
TOPBP1-206ENST00000508524 TGIF2-C20orf24A0A0A6YYL0 155 aa1.18□□□□□ -2.22
TOPBP1-206ENST00000508524 F8VRH5 84 aa1.18□□□□□ -2.22
TOPBP1-206ENST00000508524 TRGC1P0CF51 173 aa1.18□□□□□ -2.22
TOPBP1-206ENST00000508524 ATP6V0CP27449 155 aa1.18□□□□□ -2.22
TOPBP1-206ENST00000508524 AKR1C3P42330 323 aa1.18□□□□□ -2.22
TOPBP1-206ENST00000508524 RAB5BP61020 215 aa1.18□□□□□ -2.22
TOPBP1-206ENST00000508524 C9orf153Q5TBE3 101 aa1.18□□□□□ -2.22
TOPBP1-206ENST00000508524 Q5VV11 94 aa1.18□□□□□ -2.22
TOPBP1-206ENST00000508524 ATP11AUNQ6ZP68 121 aa1.18□□□□□ -2.22
TOPBP1-206ENST00000508524 Q8IZM0 81 aa1.18□□□□□ -2.22
TOPBP1-206ENST00000508524 TOMM5Q8N4H5 51 aa1.18□□□□□ -2.22
TOPBP1-206ENST00000508524 TIMM21Q9BVV7 248 aa1.18□□□□□ -2.22
TOPBP1-206ENST00000508524 CNFNQ9BYD5 112 aa1.18□□□□□ -2.22
TOPBP1-206ENST00000508524 TMEM167BQ9NRX6 74 aa1.18□□□□□ -2.22
TOPBP1-206ENST00000508524 TRBV20OR9-2A0A075B6H5 130 aa1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 TRBV20-1A0A075B6N2 111 aa1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 LOC107984156A0A0G2JMH3 177 aa1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 IFNA1P01562 189 aa1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 S100A2P29034 98 aa1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 SPRR1AP35321 89 aa1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 FAUP35544 74 aaKnown RBP1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 CKS1BP61024 79 aa1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 MRPS36P82909 103 aaKnown RBP1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 BAGE2Q86Y30 109 aa1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 ARL17AQ8IVW1 177 aa1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 C9orf62Q8N4C0 152 aa1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 YPEL4Q96NS1 127 aa1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 ANAPC13Q9BS18 74 aa1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 LIMD2Q9BT23 127 aa1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 ST20Q9HBF5 79 aa1.17□□□□□ -2.22
TOPBP1-206ENST00000508524 FXYD6-FXYD2A0A087WZ82 144 aa1.16□□□□□ -2.22
TOPBP1-206ENST00000508524 CCDC160A6NGH7 325 aa1.16□□□□□ -2.22
TOPBP1-206ENST00000508524 F2Z2F3 143 aa1.16□□□□□ -2.22
TOPBP1-206ENST00000508524 FCER1GP30273 86 aa1.16□□□□□ -2.22
TOPBP1-206ENST00000508524 RAB14P61106 215 aa1.16□□□□□ -2.22
TOPBP1-206ENST00000508524 HBBP68871 147 aa1.16□□□□□ -2.22
TOPBP1-206ENST00000508524 AKAP14Q86UN6 197 aa1.16□□□□□ -2.22
TOPBP1-206ENST00000508524 SCGB1C1Q8TD33 95 aa1.16□□□□□ -2.22
TOPBP1-206ENST00000508524 CDKN2A-AS1Q9UH64 79 aa1.16□□□□□ -2.22
TOPBP1-206ENST00000508524 SCGB1C2P0DMR2 95 aa1.15□□□□□ -2.23
TOPBP1-206ENST00000508524 RPL35P42766 123 aaKnown RBP1.15□□□□□ -2.23
TOPBP1-206ENST00000508524 H2BFSP57053 126 aa1.15□□□□□ -2.23
TOPBP1-206ENST00000508524 AP3S2P59780 193 aa1.15□□□□□ -2.23
TOPBP1-206ENST00000508524 C4orf26Q17RF5 130 aa1.15□□□□□ -2.23
TOPBP1-206ENST00000508524 CENPWQ5EE01 88 aa1.15□□□□□ -2.23
TOPBP1-206ENST00000508524 Q5XG85 94 aa1.15□□□□□ -2.23
TOPBP1-206ENST00000508524 SPRR2GQ9BYE4 73 aa1.15□□□□□ -2.23
TOPBP1-206ENST00000508524 SPANXA1Q9NS26 97 aa1.15□□□□□ -2.23
TOPBP1-206ENST00000508524 CTXND1A0A1B0GTU2 59 aa1.14□□□□□ -2.23
TOPBP1-206ENST00000508524 A0A1B0GV50 99 aa1.14□□□□□ -2.23
TOPBP1-206ENST00000508524 TMEM250H0YL14 139 aa1.14□□□□□ -2.23
TOPBP1-206ENST00000508524 PLA2G10O15496 165 aa1.14□□□□□ -2.23
TOPBP1-206ENST00000508524 MPC2O95563 127 aa1.14□□□□□ -2.23
TOPBP1-206ENST00000508524 ATP6V1G2O95670 118 aa1.14□□□□□ -2.23
TOPBP1-206ENST00000508524 PET100P0DJ07 73 aa1.14□□□□□ -2.23
TOPBP1-206ENST00000508524 MT1XP80297 61 aa1.14□□□□□ -2.23
TOPBP1-206ENST00000508524 STOML3Q8TAV4 291 aa1.14□□□□□ -2.23
TOPBP1-206ENST00000508524 PPP1R1CQ8WVI7 109 aa1.14□□□□□ -2.23
TOPBP1-206ENST00000508524 PSMG3Q9BT73 122 aaPredicted RBP1.14□□□□□ -2.23
TOPBP1-206ENST00000508524 KCNQ1DNQ9H478 68 aa1.14□□□□□ -2.23
TOPBP1-206ENST00000508524 TRBV10-3A0A0K0K1G6 114 aa1.13□□□□□ -2.23
TOPBP1-206ENST00000508524 ETDCA0A1B0GVM5 59 aa1.13□□□□□ -2.23
TOPBP1-206ENST00000508524 MAP1LC3B2A6NCE7 125 aa1.13□□□□□ -2.23
TOPBP1-206ENST00000508524 NCR3O14931 201 aa1.13□□□□□ -2.23
TOPBP1-206ENST00000508524 MP68P56378 58 aa1.13□□□□□ -2.23
TOPBP1-206ENST00000508524 TEX261Q6UWH6 196 aa1.13□□□□□ -2.23
TOPBP1-206ENST00000508524 NKX6-2Q9C056 277 aaPredicted RBP1.13□□□□□ -2.23
TOPBP1-206ENST00000508524 MAP1LC3BQ9GZQ8 125 aa1.13□□□□□ -2.23
TOPBP1-206ENST00000508524 EIF5A2Q9GZV4 153 aaKnown RBP1.13□□□□□ -2.23
TOPBP1-206ENST00000508524 TNFSF18Q9UNG2 199 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms