RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 MOBPQ13875 183 aa2.05□□□□□ -2.08
NEDD4-208ENST00000508342 KIF25-AS1Q9Y6Z4 181 aa2.04□□□□□ -2.08
NEDD4-208ENST00000508342 ZFHX3Q15911 3703 aa2.04□□□□□ -2.08
NEDD4-208ENST00000508342 ZNF80P51504 273 aaPredicted RBP2.04□□□□□ -2.08
NEDD4-208ENST00000508342 PRLHP81277 87 aa2.04□□□□□ -2.08
NEDD4-208ENST00000508342 Q5VSD8 79 aa2.04□□□□□ -2.08
NEDD4-208ENST00000508342 LINC00308Q8TCZ7 52 aa2.04□□□□□ -2.08
NEDD4-208ENST00000508342 LCA10Q71F78 164 aa2.04□□□□□ -2.08
NEDD4-208ENST00000508342 PRR26Q8N8Z3 221 aa2.04□□□□□ -2.08
NEDD4-208ENST00000508342 KLKP1Q107X0 134 aa2.04□□□□□ -2.08
NEDD4-208ENST00000508342 PRO0461Q9UI25 63 aa2.04□□□□□ -2.08
NEDD4-208ENST00000508342 A6NED7 52 aa2.04□□□□□ -2.08
NEDD4-208ENST00000508342 LINC00575Q6W349 94 aa2.04□□□□□ -2.08
NEDD4-208ENST00000508342 KTN1-AS1Q86SY8 53 aa2.04□□□□□ -2.08
NEDD4-208ENST00000508342 CDC42SE2Q9NRR3 84 aa2.04□□□□□ -2.08
NEDD4-208ENST00000508342 VPS13CQ709C8 3753 aa2.04□□□□□ -2.08
NEDD4-208ENST00000508342 LINC01547P58512 204 aaPredicted RBP2.03□□□□□ -2.08
NEDD4-208ENST00000508342 A0A087WSZ3 146 aa2.03□□□□□ -2.08
NEDD4-208ENST00000508342 KLLNB2CW77 178 aa2.03□□□□□ -2.08
NEDD4-208ENST00000508342 FLNCQ14315 2725 aa2.03□□□□□ -2.08
NEDD4-208ENST00000508342 VPS13AQ96RL7 3174 aa2.03□□□□□ -2.08
NEDD4-208ENST00000508342 RNASE3P12724 160 aaKnown RBP2.03□□□□□ -2.08
NEDD4-208ENST00000508342 C20orf197Q8N268 126 aa2.03□□□□□ -2.08
NEDD4-208ENST00000508342 SMCR5Q8TEV8 140 aa2.03□□□□□ -2.08
NEDD4-208ENST00000508342 LINC00208Q96KT6 92 aa2.03□□□□□ -2.08
NEDD4-208ENST00000508342 RBM12B-AS1Q9P1G2 102 aa2.03□□□□□ -2.08
NEDD4-208ENST00000508342 KRTAP23-1A1A580 65 aa2.03□□□□□ -2.09
NEDD4-208ENST00000508342 DNAH10OSP0CZ25 163 aa2.03□□□□□ -2.09
NEDD4-208ENST00000508342 ZNF22P17026 224 aaPredicted RBP2.03□□□□□ -2.09
NEDD4-208ENST00000508342 A0A087WTM6 91 aa2.02□□□□□ -2.09
NEDD4-208ENST00000508342 NUPR1O60356 82 aa2.02□□□□□ -2.09
NEDD4-208ENST00000508342 ENHOQ6UWT2 76 aa2.02□□□□□ -2.09
NEDD4-208ENST00000508342 C7orf65Q6ZTY9 151 aa2.02□□□□□ -2.09
NEDD4-208ENST00000508342 ZNF575Q86XF7 245 aa2.02□□□□□ -2.09
NEDD4-208ENST00000508342 C22orf24Q9Y442 160 aa2.02□□□□□ -2.09
NEDD4-208ENST00000508342 LINC00310P59036 64 aa2.02□□□□□ -2.09
NEDD4-208ENST00000508342 A0A1B0GUV1 79 aa2.02□□□□□ -2.09
NEDD4-208ENST00000508342 SPAG11AQ6PDA7 123 aa2.02□□□□□ -2.09
NEDD4-208ENST00000508342 SMIM1B2RUZ4 78 aa2.02□□□□□ -2.09
NEDD4-208ENST00000508342 LINC00313P59037 77 aa2.02□□□□□ -2.09
NEDD4-208ENST00000508342 PRR9Q5T870 116 aa2.02□□□□□ -2.09
NEDD4-208ENST00000508342 TIMM17BO60830 172 aa2.02□□□□□ -2.09
NEDD4-208ENST00000508342 Q5XG85 94 aa2.01□□□□□ -2.09
NEDD4-208ENST00000508342 SMIM11BQ8TCY0 68 aa2.01□□□□□ -2.09
NEDD4-208ENST00000508342 IGLV4-60A0A075B6I1 120 aa2.01□□□□□ -2.09
NEDD4-208ENST00000508342 Q96NJ1 140 aa2.01□□□□□ -2.09
NEDD4-208ENST00000508342 TTTY13Q9BZ97 58 aa2.01□□□□□ -2.09
NEDD4-208ENST00000508342 CHD9Q3L8U1 2897 aa2.01□□□□□ -2.09
NEDD4-208ENST00000508342 FAM104AQ969W3 186 aa2.01□□□□□ -2.09
NEDD4-208ENST00000508342 TSHBP01222 138 aa2.01□□□□□ -2.09
NEDD4-208ENST00000508342 LORP23490 312 aaPredicted RBP2.01□□□□□ -2.09
NEDD4-208ENST00000508342 FXYD2P54710 66 aa2.01□□□□□ -2.09
NEDD4-208ENST00000508342 PCOTHQ58A44 107 aa2.01□□□□□ -2.09
NEDD4-208ENST00000508342 LINC00304Q8N9R0 145 aa2.01□□□□□ -2.09
NEDD4-208ENST00000508342 RYR2Q92736 4967 aa2.01□□□□□ -2.09
NEDD4-208ENST00000508342 HCG22E2RYF7 251 aa2□□□□□ -2.09
NEDD4-208ENST00000508342 NTM-AS1Q6ZSK4 140 aa2□□□□□ -2.09
NEDD4-208ENST00000508342 CHD6Q8TD26 2715 aa2□□□□□ -2.09
NEDD4-208ENST00000508342 DEFB116Q30KQ4 102 aa2□□□□□ -2.09
NEDD4-208ENST00000508342 LINC00173Q6ZV60 143 aa2□□□□□ -2.09
NEDD4-208ENST00000508342 LAMA2P24043 3122 aaKnown RBP2□□□□□ -2.09
NEDD4-208ENST00000508342 SMG1Q96Q15 3661 aaKnown RBP2□□□□□ -2.09
NEDD4-208ENST00000508342 IGLV1-50A0A075B6I6 118 aa2□□□□□ -2.09
NEDD4-208ENST00000508342 ALMS1Q8TCU4 4167 aa2□□□□□ -2.09
NEDD4-208ENST00000508342 ZFHX4Q86UP3 3567 aa2□□□□□ -2.09
NEDD4-208ENST00000508342 FREM2Q5SZK8 3169 aa2□□□□□ -2.09
NEDD4-208ENST00000508342 C11orf1Q9H5F2 150 aa1.99□□□□□ -2.09
NEDD4-208ENST00000508342 A0A087WYN8 130 aa1.99□□□□□ -2.09
NEDD4-208ENST00000508342 POLR2KP53803 58 aaKnown RBP1.99□□□□□ -2.09
NEDD4-208ENST00000508342 Q8NBF4 154 aa1.99□□□□□ -2.09
NEDD4-208ENST00000508342 CSNK1G2-AS1Q8NCQ2 148 aa1.99□□□□□ -2.09
NEDD4-208ENST00000508342 AMELXQ99217 191 aa1.99□□□□□ -2.09
NEDD4-208ENST00000508342 WFDC2Q14508 124 aa1.99□□□□□ -2.09
NEDD4-208ENST00000508342 H0Y9P7 68 aa1.99□□□□□ -2.09
NEDD4-208ENST00000508342 ELOF1P60002 83 aaKnown RBP1.99□□□□□ -2.09
NEDD4-208ENST00000508342 LINC00167Q96N53 147 aa1.99□□□□□ -2.09
NEDD4-208ENST00000508342 SPEGQ15772 3267 aa1.98□□□□□ -2.09
NEDD4-208ENST00000508342 IGLV7-46A0A075B6I9 117 aa1.98□□□□□ -2.09
NEDD4-208ENST00000508342 CRIP1P50238 77 aa1.98□□□□□ -2.09
NEDD4-208ENST00000508342 Q1T7F1 81 aa1.98□□□□□ -2.09
NEDD4-208ENST00000508342 Q6ZSA8 131 aa1.98□□□□□ -2.09
NEDD4-208ENST00000508342 ZNF292O60281 2723 aa1.98□□□□□ -2.09
NEDD4-208ENST00000508342 LINC00694P0DN24 101 aa1.98□□□□□ -2.09
NEDD4-208ENST00000508342 SNURFQ9Y675 71 aa1.98□□□□□ -2.09
NEDD4-208ENST00000508342 ANK3Q12955 4377 aaKnown RBP1.97□□□□□ -2.09
NEDD4-208ENST00000508342 Q8N3U1 123 aa1.97□□□□□ -2.09
NEDD4-208ENST00000508342 TP53AIP1Q9HCN2 124 aa1.97□□□□□ -2.09
NEDD4-208ENST00000508342 C11orf72Q8NBR9 251 aa1.97□□□□□ -2.09
NEDD4-208ENST00000508342 OXTP01178 125 aa1.97□□□□□ -2.09
NEDD4-208ENST00000508342 LINC01554Q52M75 96 aa1.97□□□□□ -2.09
NEDD4-208ENST00000508342 C9orf92A6NGG3 77 aa1.97□□□□□ -2.09
NEDD4-208ENST00000508342 ANK2Q01484 3957 aa1.96□□□□□ -2.1
NEDD4-208ENST00000508342 CAMK2N1Q7Z7J9 78 aa1.96□□□□□ -2.1
NEDD4-208ENST00000508342 OCR1Q9BZK8 76 aa1.96□□□□□ -2.1
NEDD4-208ENST00000508342 C11orf21Q9P2W6 132 aa1.96□□□□□ -2.1
NEDD4-208ENST00000508342 A0A1B0GU69 56 aa1.96□□□□□ -2.1
NEDD4-208ENST00000508342 SSBP3-AS1Q7Z2R9 100 aa1.96□□□□□ -2.1
NEDD4-208ENST00000508342 URB1-AS1Q96HZ7 61 aa1.96□□□□□ -2.1
NEDD4-208ENST00000508342 GCN1Q92616 2671 aaKnown RBP1.96□□□□□ -2.1
NEDD4-208ENST00000508342 C1orf64Q8NEQ6 169 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms