RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 LCE6AA0A183 80 aa5.38□□□□□ -1.55
PDE6A-202ENST00000508173 CRIPTQ9P021 101 aa5.38□□□□□ -1.55
PDE6A-202ENST00000508173 CENPFP49454 3210 aa5.37□□□□□ -1.55
PDE6A-202ENST00000508173 ELOF1P60002 83 aaKnown RBP5.37□□□□□ -1.55
PDE6A-202ENST00000508173 OBSCN-AS1Q96MR7 158 aa5.37□□□□□ -1.55
PDE6A-202ENST00000508173 MUC4Q99102 2169 aa5.37□□□□□ -1.55
PDE6A-202ENST00000508173 IGHV3OR16-9A0A0B4J2B5 98 aa5.36□□□□□ -1.55
PDE6A-202ENST00000508173 CD164Q04900 197 aa5.36□□□□□ -1.55
PDE6A-202ENST00000508173 KRTAP10-11P60412 298 aa5.36□□□□□ -1.55
PDE6A-202ENST00000508173 COL27A1Q8IZC6 1860 aaPredicted RBP5.36□□□□□ -1.55
PDE6A-202ENST00000508173 IGLV8-61A0A075B6I0 122 aa5.36□□□□□ -1.55
PDE6A-202ENST00000508173 A0A096LNT2 108 aa5.36□□□□□ -1.55
PDE6A-202ENST00000508173 A8MUN3 132 aa5.35□□□□□ -1.55
PDE6A-202ENST00000508173 MRPL34Q9BQ48 92 aaKnown RBP5.35□□□□□ -1.55
PDE6A-202ENST00000508173 LOC110117498A0A087WWA1 95 aa5.35□□□□□ -1.55
PDE6A-202ENST00000508173 WIPF1O43516 503 aa5.34□□□□□ -1.55
PDE6A-202ENST00000508173 KRTAP1-3Q8IUG1 177 aa5.34□□□□□ -1.55
PDE6A-202ENST00000508173 PSORS1C2Q9UIG4 136 aa5.34□□□□□ -1.55
PDE6A-202ENST00000508173 SETXQ7Z333 2677 aaKnown RBP5.34□□□□□ -1.55
PDE6A-202ENST00000508173 IGLV7-46A0A075B6I9 117 aa5.34□□□□□ -1.56
PDE6A-202ENST00000508173 IGLV6-57P01721 117 aa5.34□□□□□ -1.56
PDE6A-202ENST00000508173 DSCR10P59022 87 aa5.34□□□□□ -1.56
PDE6A-202ENST00000508173 C19orf73Q9NVV2 129 aa5.33□□□□□ -1.56
PDE6A-202ENST00000508173 IGLV7-43P04211 117 aa5.33□□□□□ -1.56
PDE6A-202ENST00000508173 LUZP6Q538Z0 58 aa5.32□□□□□ -1.56
PDE6A-202ENST00000508173 A8MWP4 228 aa5.31□□□□□ -1.56
PDE6A-202ENST00000508173 H7BZZ5 65 aa5.31□□□□□ -1.56
PDE6A-202ENST00000508173 ZNF575Q86XF7 245 aa5.31□□□□□ -1.56
PDE6A-202ENST00000508173 KTN1-AS1Q86SY8 53 aa5.31□□□□□ -1.56
PDE6A-202ENST00000508173 KRTAP1-1Q07627 177 aa5.3□□□□□ -1.56
PDE6A-202ENST00000508173 ERC2-IT1O76042 136 aa5.3□□□□□ -1.56
PDE6A-202ENST00000508173 LINC01600Q96MT4 127 aa5.3□□□□□ -1.56
PDE6A-202ENST00000508173 TRBV7-4A0A0J9YYF1 115 aa5.3□□□□□ -1.56
PDE6A-202ENST00000508173 IGLV1-50A0A075B6I6 118 aa5.29□□□□□ -1.56
PDE6A-202ENST00000508173 K7EQZ3 153 aa5.29□□□□□ -1.56
PDE6A-202ENST00000508173 CAMK2N1Q7Z7J9 78 aa5.29□□□□□ -1.56
PDE6A-202ENST00000508173 MGAM2Q2M2H8 2515 aa5.29□□□□□ -1.56
PDE6A-202ENST00000508173 CSNK1G2-AS1Q8NCQ2 148 aa5.28□□□□□ -1.56
PDE6A-202ENST00000508173 LCA10Q71F78 164 aa5.28□□□□□ -1.56
PDE6A-202ENST00000508173 CYSTM1Q9H1C7 97 aa5.28□□□□□ -1.56
PDE6A-202ENST00000508173 FAM168BA1KXE4 195 aa5.28□□□□□ -1.56
PDE6A-202ENST00000508173 HRES1P13985 223 aa5.27□□□□□ -1.57
PDE6A-202ENST00000508173 LINC00483Q53H64 154 aa5.27□□□□□ -1.57
PDE6A-202ENST00000508173 A0A0G2JQZ4 141 aa5.26□□□□□ -1.57
PDE6A-202ENST00000508173 A0A1W2PNN7 141 aa5.26□□□□□ -1.57
PDE6A-202ENST00000508173 MAST4O15021 2626 aa5.26□□□□□ -1.57
PDE6A-202ENST00000508173 SEC61BP60468 96 aaKnown RBP5.26□□□□□ -1.57
PDE6A-202ENST00000508173 COA5Q86WW8 74 aa5.25□□□□□ -1.57
PDE6A-202ENST00000508173 KLKP1Q107X0 134 aa5.25□□□□□ -1.57
PDE6A-202ENST00000508173 Q5XG85 94 aa5.25□□□□□ -1.57
PDE6A-202ENST00000508173 CYP4F30PQ9H0H9 118 aa5.25□□□□□ -1.57
PDE6A-202ENST00000508173 C8orf17Q9NRJ1 99 aa5.24□□□□□ -1.57
PDE6A-202ENST00000508173 SETD2Q9BYW2 2564 aaPredicted RBP5.24□□□□□ -1.57
PDE6A-202ENST00000508173 IGLV5-48A0A075B6I7 105 aa5.24□□□□□ -1.57
PDE6A-202ENST00000508173 A0A1B0GVX0 72 aa5.24□□□□□ -1.57
PDE6A-202ENST00000508173 UQCR11O14957 56 aa5.23□□□□□ -1.57
PDE6A-202ENST00000508173 A0A0A0MQY5 61 aa5.23□□□□□ -1.57
PDE6A-202ENST00000508173 KRTAP10-3P60369 221 aa5.23□□□□□ -1.57
PDE6A-202ENST00000508173 FAM229BQ4G0N7 80 aa5.23□□□□□ -1.57
PDE6A-202ENST00000508173 C5orf42Q9H799 3197 aa5.22□□□□□ -1.57
PDE6A-202ENST00000508173 WDR87Q6ZQQ6 2873 aa5.22□□□□□ -1.57
PDE6A-202ENST00000508173 TNP2Q05952 138 aa5.22□□□□□ -1.57
PDE6A-202ENST00000508173 KCNQ1DNQ9H478 68 aa5.21□□□□□ -1.58
PDE6A-202ENST00000508173 H3BS24 57 aa5.21□□□□□ -1.58
PDE6A-202ENST00000508173 KLK9Q2XQG4 91 aa5.2□□□□□ -1.58
PDE6A-202ENST00000508173 A0A0D9SG42 100 aa5.2□□□□□ -1.58
PDE6A-202ENST00000508173 CEP350Q5VT06 3117 aa5.19□□□□□ -1.58
PDE6A-202ENST00000508173 LINC00612Q8N6U2 182 aa5.19□□□□□ -1.58
PDE6A-202ENST00000508173 ZFHX3Q15911 3703 aa5.19□□□□□ -1.58
PDE6A-202ENST00000508173 CNBPP62633 177 aaKnown RBP5.19□□□□□ -1.58
PDE6A-202ENST00000508173 IGFL1Q6UW32 110 aa5.19□□□□□ -1.58
PDE6A-202ENST00000508173 PRR15Q8IV56 129 aa5.19□□□□□ -1.58
PDE6A-202ENST00000508173 SPRR4Q96PI1 79 aa5.18□□□□□ -1.58
PDE6A-202ENST00000508173 ANAPC11Q9NYG5 84 aa5.18□□□□□ -1.58
PDE6A-202ENST00000508173 TLX1NBP0CAT3 122 aa5.18□□□□□ -1.58
PDE6A-202ENST00000508173 CDC42SE1Q9NRR8 79 aa5.18□□□□□ -1.58
PDE6A-202ENST00000508173 MIR22HGQ0VDD5 57 aa5.18□□□□□ -1.58
PDE6A-202ENST00000508173 PLA2G2DQ9UNK4 145 aa5.17□□□□□ -1.58
PDE6A-202ENST00000508173 A0A0C4DFX4 3053 aa5.17□□□□□ -1.58
PDE6A-202ENST00000508173 Q5VSD8 79 aa5.17□□□□□ -1.58
PDE6A-202ENST00000508173 C15orf56Q8N910 161 aa5.17□□□□□ -1.58
PDE6A-202ENST00000508173 OXTP01178 125 aa5.17□□□□□ -1.58
PDE6A-202ENST00000508173 PRR26Q8N8Z3 221 aa5.17□□□□□ -1.58
PDE6A-202ENST00000508173 USP24Q9UPU5 2620 aa5.16□□□□□ -1.58
PDE6A-202ENST00000508173 CSAG1Q6PB30 78 aa5.15□□□□□ -1.58
PDE6A-202ENST00000508173 Q8N377 158 aa5.15□□□□□ -1.59
PDE6A-202ENST00000508173 PRR34Q9NV39 138 aa5.14□□□□□ -1.59
PDE6A-202ENST00000508173 FAM104AQ969W3 186 aa5.14□□□□□ -1.59
PDE6A-202ENST00000508173 FP248Q71RG6 208 aaPredicted RBP5.13□□□□□ -1.59
PDE6A-202ENST00000508173 CFAP46Q8IYW2 2715 aa5.13□□□□□ -1.59
PDE6A-202ENST00000508173 PLAC4Q8WY50 150 aa5.13□□□□□ -1.59
PDE6A-202ENST00000508173 Q8N1X5 172 aa5.13□□□□□ -1.59
PDE6A-202ENST00000508173 DNAH14Q0VDD8 3507 aa5.12□□□□□ -1.59
PDE6A-202ENST00000508173 ATRQ13535 2644 aa5.11□□□□□ -1.59
PDE6A-202ENST00000508173 S4R3F8 94 aa5.1□□□□□ -1.59
PDE6A-202ENST00000508173 Q1T7F1 81 aa5.09□□□□□ -1.59
PDE6A-202ENST00000508173 MKI67P46013 3256 aaKnown RBP5.08□□□□□ -1.6
PDE6A-202ENST00000508173 A0A1W2PNM2 257 aa5.08□□□□□ -1.6
PDE6A-202ENST00000508173 OCR1Q9BZK8 76 aa5.08□□□□□ -1.6
PDE6A-202ENST00000508173 GIG44P09565 113 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms