RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 TAL2Q16559 108 aa13.68□□□□□ -0.22
SNCB-204ENST00000508006 UQCR10Q9UDW1 63 aa13.67□□□□□ -0.22
SNCB-204ENST00000508006 SPRR1AP35321 89 aa13.65□□□□□ -0.22
SNCB-204ENST00000508006 ZNF861PO60384 105 aa13.64□□□□□ -0.23
SNCB-204ENST00000508006 RPL28P46779 137 aaKnown RBP13.64□□□□□ -0.23
SNCB-204ENST00000508006 LINC00337Q8N6G1 96 aa13.63□□□□□ -0.23
SNCB-204ENST00000508006 OR13C6PQ8NH95 151 aa13.63□□□□□ -0.23
SNCB-204ENST00000508006 TRAV13-2A0A0B4J235 113 aa13.62□□□□□ -0.23
SNCB-204ENST00000508006 A4D1N5 150 aa13.62□□□□□ -0.23
SNCB-204ENST00000508006 TRAV23DV6A0A075B6W5 121 aa13.61□□□□□ -0.23
SNCB-204ENST00000508006 H0Y9J4 135 aa13.61□□□□□ -0.23
SNCB-204ENST00000508006 DIRC1Q969H9 104 aa13.61□□□□□ -0.23
SNCB-204ENST00000508006 UBE2AP49459 152 aa13.6□□□□□ -0.23
SNCB-204ENST00000508006 FAM19A1Q7Z5A9 133 aa13.6□□□□□ -0.23
SNCB-204ENST00000508006 KRTAP13-1Q8IUC0 172 aa13.6□□□□□ -0.23
SNCB-204ENST00000508006 KRTAP4-16G5E9R7 235 aaPredicted RBP13.59□□□□□ -0.23
SNCB-204ENST00000508006 MT1HL1P0DM35 61 aa13.59□□□□□ -0.23
SNCB-204ENST00000508006 ETDCA0A1B0GVM5 59 aa13.57□□□□□ -0.24
SNCB-204ENST00000508006 A6NDN8 102 aa13.57□□□□□ -0.24
SNCB-204ENST00000508006 ZNF73O43830 326 aaPredicted RBP13.57□□□□□ -0.24
SNCB-204ENST00000508006 CEND1Q8N111 149 aa13.57□□□□□ -0.24
SNCB-204ENST00000508006 HSD52Q0P140 79 aa13.56□□□□□ -0.24
SNCB-204ENST00000508006 C12orf57Q99622 126 aa13.56□□□□□ -0.24
SNCB-204ENST00000508006 TMEM238LA0A1B0GVL6 79 aa13.55□□□□□ -0.24
SNCB-204ENST00000508006 A6NJY4 79 aa13.55□□□□□ -0.24
SNCB-204ENST00000508006 HINT1P49773 126 aaPredicted RBP13.55□□□□□ -0.24
SNCB-204ENST00000508006 B5MCH6 92 aa13.52□□□□□ -0.25
SNCB-204ENST00000508006 PRLHP81277 87 aa13.52□□□□□ -0.25
SNCB-204ENST00000508006 PRO1933Q9H354 126 aa13.52□□□□□ -0.25
SNCB-204ENST00000508006 Q6ZRX8 168 aa13.51□□□□□ -0.25
SNCB-204ENST00000508006 A0A0B4J2C4 111 aa13.5□□□□□ -0.25
SNCB-204ENST00000508006 TRBV7-6A0A0J9YX20 115 aa13.5□□□□□ -0.25
SNCB-204ENST00000508006 TSTD3H0UI37 97 aa13.5□□□□□ -0.25
SNCB-204ENST00000508006 CFC1BP0CG36 223 aa13.49□□□□□ -0.25
SNCB-204ENST00000508006 CFC1P0CG37 223 aa13.49□□□□□ -0.25
SNCB-204ENST00000508006 RAB37Q96AX2 223 aa13.47□□□□□ -0.25
SNCB-204ENST00000508006 C6orf99Q4VX62 202 aa13.46□□□□□ -0.25
SNCB-204ENST00000508006 HIGD2AQ9BW72 106 aa13.46□□□□□ -0.25
SNCB-204ENST00000508006 FXYD2P54710 66 aa13.45□□□□□ -0.26
SNCB-204ENST00000508006 SMIM11BQ8TCY0 68 aa13.45□□□□□ -0.26
SNCB-204ENST00000508006 RPL13AP40429 203 aaKnown RBP13.44□□□□□ -0.26
SNCB-204ENST00000508006 ELOF1P60002 83 aaKnown RBP13.44□□□□□ -0.26
SNCB-204ENST00000508006 A0A1B0GWB2 263 aa13.43□□□□□ -0.26
SNCB-204ENST00000508006 LINC01600Q96MT4 127 aa13.43□□□□□ -0.26
SNCB-204ENST00000508006 RNF213Q63HN8 5207 aa13.43□□□□□ -0.26
SNCB-204ENST00000508006 LRP2P98164 4655 aa13.42□□□□□ -0.26
SNCB-204ENST00000508006 COX7BP24311 80 aa13.42□□□□□ -0.26
SNCB-204ENST00000508006 SMCR5Q8TEV8 140 aa13.42□□□□□ -0.26
SNCB-204ENST00000508006 VAMP3Q15836 100 aa13.41□□□□□ -0.26
SNCB-204ENST00000508006 Q9BRP9 147 aa13.41□□□□□ -0.26
SNCB-204ENST00000508006 DHRS4-AS1Q9P1J3 65 aa13.41□□□□□ -0.26
SNCB-204ENST00000508006 PRO1854Q9UHT4 67 aa13.41□□□□□ -0.26
SNCB-204ENST00000508006 ZNF706Q9Y5V0 76 aaPredicted RBP13.41□□□□□ -0.26
SNCB-204ENST00000508006 KRTAP1-4P0C5Y4 121 aa13.4□□□□□ -0.26
SNCB-204ENST00000508006 M0R143 59 aa13.38□□□□□ -0.27
SNCB-204ENST00000508006 NHP2Q9NX24 153 aaKnown RBP13.38□□□□□ -0.27
SNCB-204ENST00000508006 TNXBP22105 4242 aa13.37□□□□□ -0.27
SNCB-204ENST00000508006 CTAG1AP78358 180 aa13.37□□□□□ -0.27
SNCB-204ENST00000508006 BVES-AS1Q5T3Y7 98 aa13.37□□□□□ -0.27
SNCB-204ENST00000508006 FAM229BQ4G0N7 80 aa13.35□□□□□ -0.27
SNCB-204ENST00000508006 SPRR4Q96PI1 79 aa13.34□□□□□ -0.27
SNCB-204ENST00000508006 H7C2G1 150 aa13.32□□□□□ -0.28
SNCB-204ENST00000508006 ERC2-IT1O76042 136 aa13.32□□□□□ -0.28
SNCB-204ENST00000508006 Q1RN00 199 aa13.31□□□□□ -0.28
SNCB-204ENST00000508006 KRTAP10-8P60410 259 aa13.3□□□□□ -0.28
SNCB-204ENST00000508006 SLC25A20O43772 301 aa13.29□□□□□ -0.28
SNCB-204ENST00000508006 CRYGAP11844 174 aa13.29□□□□□ -0.28
SNCB-204ENST00000508006 H0YGX0 51 aa13.28□□□□□ -0.28
SNCB-204ENST00000508006 LINC00483Q53H64 154 aa13.28□□□□□ -0.28
SNCB-204ENST00000508006 LINC00575Q6W349 94 aa13.27□□□□□ -0.29
SNCB-204ENST00000508006 K7ERJ3 54 aa13.26□□□□□ -0.29
SNCB-204ENST00000508006 PRR26Q8N8Z3 221 aa13.26□□□□□ -0.29
SNCB-204ENST00000508006 A0A087X002 238 aa13.23□□□□□ -0.29
SNCB-204ENST00000508006 hADV29S1A0JD25 119 aa13.23□□□□□ -0.29
SNCB-204ENST00000508006 SNCGO76070 127 aa13.23□□□□□ -0.29
SNCB-204ENST00000508006 GAGE2AQ6NT46 116 aa13.23□□□□□ -0.29
SNCB-204ENST00000508006 ANAPC11Q9NYG5 84 aa13.23□□□□□ -0.29
SNCB-204ENST00000508006 SPRR1BP22528 89 aa13.22□□□□□ -0.29
SNCB-204ENST00000508006 TSPAN13O95857 204 aa13.21□□□□□ -0.29
SNCB-204ENST00000508006 COX6CP09669 75 aa13.21□□□□□ -0.29
SNCB-204ENST00000508006 ST20-AS1Q8NBB2 130 aa13.21□□□□□ -0.29
SNCB-204ENST00000508006 TRIAP1O43715 76 aa13.2□□□□□ -0.3
SNCB-204ENST00000508006 A0A1B0GX51 115 aa13.19□□□□□ -0.3
SNCB-204ENST00000508006 PSMB2P49721 201 aa13.19□□□□□ -0.3
SNCB-204ENST00000508006 IGLV5-48A0A075B6I7 105 aa13.18□□□□□ -0.3
SNCB-204ENST00000508006 TEX49A0A1B0GTD5 131 aa13.18□□□□□ -0.3
SNCB-204ENST00000508006 TYMSOSQ8TAI1 123 aa13.18□□□□□ -0.3
SNCB-204ENST00000508006 KRTAP13-2Q52LG2 175 aa13.17□□□□□ -0.3
SNCB-204ENST00000508006 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.16□□□□□ -0.3
SNCB-204ENST00000508006 OCIAD2Q56VL3 154 aa13.13□□□□□ -0.31
SNCB-204ENST00000508006 Q6ZQY7 126 aa13.13□□□□□ -0.31
SNCB-204ENST00000508006 LINC01547P58512 204 aaPredicted RBP13.12□□□□□ -0.31
SNCB-204ENST00000508006 BATFQ16520 125 aa13.12□□□□□ -0.31
SNCB-204ENST00000508006 DEFB105AQ8NG35 78 aa13.12□□□□□ -0.31
SNCB-204ENST00000508006 PPDPFLQ8WWR9 84 aa13.12□□□□□ -0.31
SNCB-204ENST00000508006 LAMTOR3Q9UHA4 124 aa13.12□□□□□ -0.31
SNCB-204ENST00000508006 FAM218AQ96MZ4 157 aa13.11□□□□□ -0.31
SNCB-204ENST00000508006 GHRHP01286 108 aa13.1□□□□□ -0.31
SNCB-204ENST00000508006 SSBP3-AS1Q7Z2R9 100 aa13.1□□□□□ -0.31
SNCB-204ENST00000508006 C3orf22Q8N5N4 141 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms