RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 KRTAP29-1A8MX34 341 aaPredicted RBP3.83□□□□□ -1.8
CLDND1-213ENST00000506927 KRTAP10-3P60369 221 aa3.83□□□□□ -1.8
CLDND1-213ENST00000506927 C14orf177Q52M58 125 aa3.83□□□□□ -1.8
CLDND1-213ENST00000506927 KRTAP26-1Q6PEX3 210 aa3.83□□□□□ -1.8
CLDND1-213ENST00000506927 Q6ZRP5 223 aa3.83□□□□□ -1.8
CLDND1-213ENST00000506927 C15orf56Q8N910 161 aa3.83□□□□□ -1.8
CLDND1-213ENST00000506927 Q8NBF4 154 aa3.83□□□□□ -1.8
CLDND1-213ENST00000506927 IGLV1-50A0A075B6I6 118 aa3.82□□□□□ -1.8
CLDND1-213ENST00000506927 SPRR1AP35321 89 aa3.82□□□□□ -1.8
CLDND1-213ENST00000506927 WFDC10BQ8IUB3 73 aa3.82□□□□□ -1.8
CLDND1-213ENST00000506927 Q8N377 158 aa3.82□□□□□ -1.8
CLDND1-213ENST00000506927 DEFB105AQ8NG35 78 aa3.82□□□□□ -1.8
CLDND1-213ENST00000506927 C7orf33Q8WU49 177 aa3.82□□□□□ -1.8
CLDND1-213ENST00000506927 RELNP78509 3460 aa3.82□□□□□ -1.8
CLDND1-213ENST00000506927 WNK1Q9H4A3 2382 aa3.81□□□□□ -1.8
CLDND1-213ENST00000506927 LCE6AA0A183 80 aa3.81□□□□□ -1.8
CLDND1-213ENST00000506927 hDV103S1A0JD37 113 aa3.81□□□□□ -1.8
CLDND1-213ENST00000506927 UBE2BP63146 152 aa3.81□□□□□ -1.8
CLDND1-213ENST00000506927 REG3GQ6UW15 175 aa3.81□□□□□ -1.8
CLDND1-213ENST00000506927 SCXQ7RTU7 201 aa3.81□□□□□ -1.8
CLDND1-213ENST00000506927 MRPL55Q7Z7F7 128 aaKnown RBP3.81□□□□□ -1.8
CLDND1-213ENST00000506927 HCG22E2RYF7 251 aa3.8□□□□□ -1.8
CLDND1-213ENST00000506927 C3orf84H3BNL1 204 aa3.8□□□□□ -1.8
CLDND1-213ENST00000506927 PKD1L2Q7Z442 2459 aa3.8□□□□□ -1.8
CLDND1-213ENST00000506927 NAV2Q8IVL1 2488 aa3.8□□□□□ -1.8
CLDND1-213ENST00000506927 M0R2N4 97 aa3.79□□□□□ -1.8
CLDND1-213ENST00000506927 OXTP01178 125 aa3.79□□□□□ -1.8
CLDND1-213ENST00000506927 Q6ZTC4 211 aa3.79□□□□□ -1.8
CLDND1-213ENST00000506927 CYP4F30PQ9H0H9 118 aa3.79□□□□□ -1.8
CLDND1-213ENST00000506927 ZFHX3Q15911 3703 aa3.78□□□□□ -1.8
CLDND1-213ENST00000506927 ACACBO00763 2458 aa3.78□□□□□ -1.8
CLDND1-213ENST00000506927 IGLV8-61A0A075B6I0 122 aa3.78□□□□□ -1.8
CLDND1-213ENST00000506927 IGKV2D-30A0A075B6S6 120 aa3.78□□□□□ -1.8
CLDND1-213ENST00000506927 INAFM1C9JVW0 142 aa3.78□□□□□ -1.8
CLDND1-213ENST00000506927 KRTAP4-16G5E9R7 235 aaPredicted RBP3.78□□□□□ -1.8
CLDND1-213ENST00000506927 H0Y9J4 135 aa3.78□□□□□ -1.8
CLDND1-213ENST00000506927 Q1T7F1 81 aa3.78□□□□□ -1.8
CLDND1-213ENST00000506927 CRYBG3Q68DQ2 2970 aa3.78□□□□□ -1.8
CLDND1-213ENST00000506927 SPANXA2-OT1Q8N9U9 137 aa3.78□□□□□ -1.8
CLDND1-213ENST00000506927 LINC00474Q9P2X8 69 aa3.78□□□□□ -1.8
CLDND1-213ENST00000506927 USP9YO00507 2555 aaPredicted RBP3.78□□□□□ -1.8
CLDND1-213ENST00000506927 UTP20O75691 2785 aaKnown RBP3.77□□□□□ -1.81
CLDND1-213ENST00000506927 ITPR1Q14643 2758 aa3.77□□□□□ -1.81
CLDND1-213ENST00000506927 NCOR2Q9Y618 2525 aa3.77□□□□□ -1.81
CLDND1-213ENST00000506927 C1orf195Q5TG92 126 aa3.77□□□□□ -1.81
CLDND1-213ENST00000506927 FP248Q71RG6 208 aaPredicted RBP3.77□□□□□ -1.81
CLDND1-213ENST00000506927 SMIM29Q86T20 159 aa3.77□□□□□ -1.81
CLDND1-213ENST00000506927 USP9XQ93008 2570 aaPredicted RBP3.77□□□□□ -1.81
CLDND1-213ENST00000506927 TEX15Q9BXT5 2789 aa3.77□□□□□ -1.81
CLDND1-213ENST00000506927 SVEP1Q4LDE5 3571 aa3.77□□□□□ -1.81
CLDND1-213ENST00000506927 SPTBN4Q9H254 2564 aa3.76□□□□□ -1.81
CLDND1-213ENST00000506927 MYO9AB2RTY4 2548 aa3.76□□□□□ -1.81
CLDND1-213ENST00000506927 CHD6Q8TD26 2715 aa3.76□□□□□ -1.81
CLDND1-213ENST00000506927 A0A1W2PNM2 257 aa3.76□□□□□ -1.81
CLDND1-213ENST00000506927 C16orf90A8MZG2 172 aa3.76□□□□□ -1.81
CLDND1-213ENST00000506927 RPL37AP61513 92 aaKnown RBP3.76□□□□□ -1.81
CLDND1-213ENST00000506927 SERTAD4-AS1Q5TG53 156 aa3.76□□□□□ -1.81
CLDND1-213ENST00000506927 LINC00336Q6ZUF6 198 aa3.76□□□□□ -1.81
CLDND1-213ENST00000506927 BRK1Q8WUW1 75 aa3.76□□□□□ -1.81
CLDND1-213ENST00000506927 LIMD2Q9BT23 127 aa3.76□□□□□ -1.81
CLDND1-213ENST00000506927 HIGD2AQ9BW72 106 aa3.76□□□□□ -1.81
CLDND1-213ENST00000506927 MXRA5Q9NR99 2828 aa3.76□□□□□ -1.81
CLDND1-213ENST00000506927 CACNA1AO00555 2505 aa3.76□□□□□ -1.81
CLDND1-213ENST00000506927 UBR5O95071 2799 aaPredicted RBP3.75□□□□□ -1.81
CLDND1-213ENST00000506927 NOTCH3Q9UM47 2321 aa3.75□□□□□ -1.81
CLDND1-213ENST00000506927 PSCAO43653 123 aa3.75□□□□□ -1.81
CLDND1-213ENST00000506927 UBE2AP49459 152 aa3.75□□□□□ -1.81
CLDND1-213ENST00000506927 CNBPP62633 177 aaKnown RBP3.75□□□□□ -1.81
CLDND1-213ENST00000506927 B9D2Q9BPU9 175 aa3.75□□□□□ -1.81
CLDND1-213ENST00000506927 Q9BRP9 147 aa3.75□□□□□ -1.81
CLDND1-213ENST00000506927 TP53AIP1Q9HCN2 124 aa3.75□□□□□ -1.81
CLDND1-213ENST00000506927 COL12A1Q99715 3063 aa3.75□□□□□ -1.81
CLDND1-213ENST00000506927 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.74□□□□□ -1.81
CLDND1-213ENST00000506927 Q8N9L7 120 aa3.74□□□□□ -1.81
CLDND1-213ENST00000506927 ZCCHC13Q8WW36 166 aaKnown RBP3.74□□□□□ -1.81
CLDND1-213ENST00000506927 KRTAP1-5Q9BYS1 174 aa3.74□□□□□ -1.81
CLDND1-213ENST00000506927 VPS13CQ709C8 3753 aa3.74□□□□□ -1.81
CLDND1-213ENST00000506927 FAM208BQ5VWN6 2430 aa3.74□□□□□ -1.81
CLDND1-213ENST00000506927 TLN2Q9Y4G6 2542 aa3.74□□□□□ -1.81
CLDND1-213ENST00000506927 CHD8Q9HCK8 2581 aa3.73□□□□□ -1.81
CLDND1-213ENST00000506927 C2CD3Q4AC94 2353 aa3.73□□□□□ -1.81
CLDND1-213ENST00000506927 A8MWP4 228 aa3.73□□□□□ -1.81
CLDND1-213ENST00000506927 SPRR1BP22528 89 aa3.73□□□□□ -1.81
CLDND1-213ENST00000506927 DSCR10P59022 87 aa3.73□□□□□ -1.81
CLDND1-213ENST00000506927 PRR15Q8IV56 129 aa3.73□□□□□ -1.81
CLDND1-213ENST00000506927 SMR3AQ99954 134 aa3.73□□□□□ -1.81
CLDND1-213ENST00000506927 LINC00588Q9Y4M8 146 aa3.73□□□□□ -1.81
CLDND1-213ENST00000506927 MYO18BQ8IUG5 2567 aa3.73□□□□□ -1.81
CLDND1-213ENST00000506927 IGSF10Q6WRI0 2623 aa3.73□□□□□ -1.81
CLDND1-213ENST00000506927 MAP1AP78559 2803 aaPredicted RBP3.72□□□□□ -1.81
CLDND1-213ENST00000506927 CELSR2Q9HCU4 2923 aa3.72□□□□□ -1.81
CLDND1-213ENST00000506927 HIVEP2P31629 2446 aa3.72□□□□□ -1.81
CLDND1-213ENST00000506927 K7EQZ3 153 aa3.72□□□□□ -1.81
CLDND1-213ENST00000506927 CASC2Q6XLA1 102 aa3.72□□□□□ -1.81
CLDND1-213ENST00000506927 C1orf64Q8NEQ6 169 aa3.72□□□□□ -1.81
CLDND1-213ENST00000506927 ZNF706Q9Y5V0 76 aaPredicted RBP3.72□□□□□ -1.81
CLDND1-213ENST00000506927 TRAV22A0A0B4J277 110 aa3.71□□□□□ -1.82
CLDND1-213ENST00000506927 CDK2AP2O75956 126 aa3.71□□□□□ -1.82
CLDND1-213ENST00000506927 IGFL1Q6UW32 110 aa3.71□□□□□ -1.82
CLDND1-213ENST00000506927 FBN2P35556 2912 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms