RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 RPS29P62273 56 aaKnown RBP3.73□□□□□ -1.81
VCAN-206ENST00000505615 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
VCAN-206ENST00000505615 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
VCAN-206ENST00000505615 FAM19A3Q7Z5A8 133 aa3.73□□□□□ -1.81
VCAN-206ENST00000505615 AMN1Q8IY45 258 aa3.73□□□□□ -1.81
VCAN-206ENST00000505615 VPS25Q9BRG1 176 aa3.73□□□□□ -1.81
VCAN-206ENST00000505615 TMEM191AQ9H0A3 160 aa3.73□□□□□ -1.81
VCAN-206ENST00000505615 FABP9Q0Z7S8 132 aa3.72□□□□□ -1.81
VCAN-206ENST00000505615 Q8IZM0 81 aa3.72□□□□□ -1.81
VCAN-206ENST00000505615 C2orf88Q9BSF0 95 aa3.72□□□□□ -1.81
VCAN-206ENST00000505615 TMEM126AQ9H061 195 aa3.72□□□□□ -1.81
VCAN-206ENST00000505615 MANBALQ9NQG1 85 aa3.72□□□□□ -1.81
VCAN-206ENST00000505615 TOMM7Q9P0U1 55 aa3.72□□□□□ -1.81
VCAN-206ENST00000505615 GNG13Q9P2W3 67 aa3.72□□□□□ -1.81
VCAN-206ENST00000505615 M0R378 163 aa3.71□□□□□ -1.82
VCAN-206ENST00000505615 S100PP25815 95 aa3.71□□□□□ -1.82
VCAN-206ENST00000505615 UMAD1C9J7I0 102 aa3.7□□□□□ -1.82
VCAN-206ENST00000505615 C9JQL5 133 aa3.7□□□□□ -1.82
VCAN-206ENST00000505615 F8VRH5 84 aa3.7□□□□□ -1.82
VCAN-206ENST00000505615 SLC25A20O43772 301 aa3.7□□□□□ -1.82
VCAN-206ENST00000505615 MT3P25713 68 aa3.7□□□□□ -1.82
VCAN-206ENST00000505615 HERVK_113P63121 156 aa3.7□□□□□ -1.82
VCAN-206ENST00000505615 HIGD2AQ9BW72 106 aa3.7□□□□□ -1.82
VCAN-206ENST00000505615 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
VCAN-206ENST00000505615 NEBP20929 6669 aa3.69□□□□□ -1.82
VCAN-206ENST00000505615 A0A1B0GUT8 65 aa3.69□□□□□ -1.82
VCAN-206ENST00000505615 A8MWL6 223 aa3.69□□□□□ -1.82
VCAN-206ENST00000505615 PPP1R17O96001 155 aa3.69□□□□□ -1.82
VCAN-206ENST00000505615 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
VCAN-206ENST00000505615 FA2HQ7L5A8 372 aa3.69□□□□□ -1.82
VCAN-206ENST00000505615 CAMK2N1Q7Z7J9 78 aa3.69□□□□□ -1.82
VCAN-206ENST00000505615 S100ZQ8WXG8 99 aa3.69□□□□□ -1.82
VCAN-206ENST00000505615 MED9Q9NWA0 146 aa3.69□□□□□ -1.82
VCAN-206ENST00000505615 ZNF706Q9Y5V0 76 aaPredicted RBP3.69□□□□□ -1.82
VCAN-206ENST00000505615 DLEU1O43261 78 aa3.68□□□□□ -1.82
VCAN-206ENST00000505615 RPS28P62857 69 aaKnown RBP3.68□□□□□ -1.82
VCAN-206ENST00000505615 RHEBQ15382 184 aa3.68□□□□□ -1.82
VCAN-206ENST00000505615 ZC2HC1BQ5TFG8 222 aa3.68□□□□□ -1.82
VCAN-206ENST00000505615 LINC00299Q6ZSB3 139 aa3.68□□□□□ -1.82
VCAN-206ENST00000505615 C20orf78Q9BR46 151 aa3.68□□□□□ -1.82
VCAN-206ENST00000505615 SMIM2Q9BVW6 85 aa3.68□□□□□ -1.82
VCAN-206ENST00000505615 TRBV24-1A0A075B6N3 115 aa3.67□□□□□ -1.82
VCAN-206ENST00000505615 C9orf92A6NGG3 77 aa3.67□□□□□ -1.82
VCAN-206ENST00000505615 HIGD1CA8MV81 97 aa3.67□□□□□ -1.82
VCAN-206ENST00000505615 MRPL51Q4U2R6 128 aaKnown RBP3.67□□□□□ -1.82
VCAN-206ENST00000505615 LINC00483Q53H64 154 aa3.67□□□□□ -1.82
VCAN-206ENST00000505615 Q8NDZ9 215 aa3.67□□□□□ -1.82
VCAN-206ENST00000505615 TMEM141Q96I45 108 aa3.67□□□□□ -1.82
VCAN-206ENST00000505615 J3KT08 172 aa3.66□□□□□ -1.82
VCAN-206ENST00000505615 MT2AP02795 61 aa3.66□□□□□ -1.82
VCAN-206ENST00000505615 IFI27P40305 119 aaPredicted RBP3.66□□□□□ -1.82
VCAN-206ENST00000505615 CXCL5P42830 114 aa3.66□□□□□ -1.82
VCAN-206ENST00000505615 KRTAP10-5P60370 271 aa3.66□□□□□ -1.82
VCAN-206ENST00000505615 MOBPQ13875 183 aa3.66□□□□□ -1.82
VCAN-206ENST00000505615 KRTAP19-6Q3LI70 58 aa3.66□□□□□ -1.82
VCAN-206ENST00000505615 AMELXQ99217 191 aa3.66□□□□□ -1.82
VCAN-206ENST00000505615 C12orf57Q99622 126 aa3.66□□□□□ -1.82
VCAN-206ENST00000505615 HSPB8Q9UJY1 196 aa3.66□□□□□ -1.82
VCAN-206ENST00000505615 A0A1B0GX51 115 aa3.65□□□□□ -1.83
VCAN-206ENST00000505615 FAM104BQ5XKR9 115 aa3.65□□□□□ -1.83
VCAN-206ENST00000505615 CDKN2A-AS1Q9UH64 79 aa3.65□□□□□ -1.83
VCAN-206ENST00000505615 NPYP01303 97 aa3.64□□□□□ -1.83
VCAN-206ENST00000505615 MT1FP04733 61 aa3.64□□□□□ -1.83
VCAN-206ENST00000505615 SSBP3-AS1Q7Z2R9 100 aa3.64□□□□□ -1.83
VCAN-206ENST00000505615 LINC01551Q86U37 167 aa3.64□□□□□ -1.83
VCAN-206ENST00000505615 LITAFQ99732 161 aa3.64□□□□□ -1.83
VCAN-206ENST00000505615 LAMTOR3Q9UHA4 124 aa3.64□□□□□ -1.83
VCAN-206ENST00000505615 LINC00862A6NCI5 91 aa3.63□□□□□ -1.83
VCAN-206ENST00000505615 KRTAP16-1A8MUX0 517 aa3.63□□□□□ -1.83
VCAN-206ENST00000505615 NMUP48645 174 aa3.63□□□□□ -1.83
VCAN-206ENST00000505615 ZNF345Q14585 488 aa3.63□□□□□ -1.83
VCAN-206ENST00000505615 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
VCAN-206ENST00000505615 MUC12Q9UKN1 5478 aa3.63□□□□□ -1.83
VCAN-206ENST00000505615 D6R8Y8 96 aa3.62□□□□□ -1.83
VCAN-206ENST00000505615 CKS2P33552 79 aa3.62□□□□□ -1.83
VCAN-206ENST00000505615 LINC00313P59037 77 aa3.62□□□□□ -1.83
VCAN-206ENST00000505615 RPL37P61927 97 aaKnown RBP3.62□□□□□ -1.83
VCAN-206ENST00000505615 Q6Q795 121 aa3.62□□□□□ -1.83
VCAN-206ENST00000505615 SMCR5Q8TEV8 140 aa3.62□□□□□ -1.83
VCAN-206ENST00000505615 COX7B2Q8TF08 81 aa3.62□□□□□ -1.83
VCAN-206ENST00000505615 SND1-IT1Q9HBX3 110 aa3.62□□□□□ -1.83
VCAN-206ENST00000505615 IGLV6-57P01721 117 aa3.61□□□□□ -1.83
VCAN-206ENST00000505615 S100A2P29034 98 aa3.61□□□□□ -1.83
VCAN-206ENST00000505615 ORMDL3Q8N138 153 aa3.61□□□□□ -1.83
VCAN-206ENST00000505615 CYSLTR1Q9Y271 337 aa3.61□□□□□ -1.83
VCAN-206ENST00000505615 LAMTOR2Q9Y2Q5 125 aa3.61□□□□□ -1.83
VCAN-206ENST00000505615 LST1O00453 97 aa3.6□□□□□ -1.83
VCAN-206ENST00000505615 IMUPQ9GZP8 106 aa3.6□□□□□ -1.83
VCAN-206ENST00000505615 OSTCQ9NRP0 149 aa3.6□□□□□ -1.83
VCAN-206ENST00000505615 V9GYV3 84 aa3.6□□□□□ -1.83
VCAN-206ENST00000505615 TRAV9-1A0A075B6T8 112 aa3.59□□□□□ -1.83
VCAN-206ENST00000505615 IGIPA6NJ69 53 aa3.59□□□□□ -1.83
VCAN-206ENST00000505615 ERC2-IT1O76042 136 aa3.59□□□□□ -1.83
VCAN-206ENST00000505615 SPRR1AP35321 89 aa3.59□□□□□ -1.83
VCAN-206ENST00000505615 Q1RN00 199 aa3.59□□□□□ -1.83
VCAN-206ENST00000505615 LINC00846Q9NV44 126 aa3.59□□□□□ -1.83
VCAN-206ENST00000505615 KANTRA0A1W2PQU2 76 aa3.58□□□□□ -1.84
VCAN-206ENST00000505615 A8MUN3 132 aa3.58□□□□□ -1.84
VCAN-206ENST00000505615 K7ERU9 68 aa3.58□□□□□ -1.84
VCAN-206ENST00000505615 SMIM6P0DI80 62 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms