RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 SCGB1D4Q6XE38 83 aa5.76□□□□□ -1.49
NEDD9-210ENST00000505589 ZNF625Q96I27 306 aaPredicted RBP5.76□□□□□ -1.49
NEDD9-210ENST00000505589 PPDPFQ9H3Y8 114 aa5.76□□□□□ -1.49
NEDD9-210ENST00000505589 A0A0J9YXY3 114 aa5.75□□□□□ -1.49
NEDD9-210ENST00000505589 FP248Q71RG6 208 aaPredicted RBP5.75□□□□□ -1.49
NEDD9-210ENST00000505589 RETNLBQ9BQ08 111 aa5.75□□□□□ -1.49
NEDD9-210ENST00000505589 XAGE1AQ9HD64 81 aa5.75□□□□□ -1.49
NEDD9-210ENST00000505589 HERV-K104P63124 156 aa5.74□□□□□ -1.49
NEDD9-210ENST00000505589 HSD52Q0P140 79 aa5.74□□□□□ -1.49
NEDD9-210ENST00000505589 LINC00167Q96N53 147 aa5.74□□□□□ -1.49
NEDD9-210ENST00000505589 KRTAP4-12Q9BQ66 201 aa5.74□□□□□ -1.49
NEDD9-210ENST00000505589 TMEM238C9JI98 176 aa5.73□□□□□ -1.49
NEDD9-210ENST00000505589 TIMM17BO60830 172 aa5.73□□□□□ -1.49
NEDD9-210ENST00000505589 NKAPP1Q8N9T2 125 aa5.73□□□□□ -1.49
NEDD9-210ENST00000505589 SPANXB1Q9NS25 103 aaPredicted RBP5.73□□□□□ -1.49
NEDD9-210ENST00000505589 A6NJY4 79 aa5.72□□□□□ -1.49
NEDD9-210ENST00000505589 RPL37AP8A6NKH3 93 aa5.72□□□□□ -1.49
NEDD9-210ENST00000505589 SEC61BP60468 96 aaKnown RBP5.72□□□□□ -1.49
NEDD9-210ENST00000505589 TAL2Q16559 108 aa5.72□□□□□ -1.49
NEDD9-210ENST00000505589 KRTAP13-2Q52LG2 175 aa5.72□□□□□ -1.49
NEDD9-210ENST00000505589 LITAFQ99732 161 aa5.72□□□□□ -1.49
NEDD9-210ENST00000505589 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
NEDD9-210ENST00000505589 M0R143 59 aa5.71□□□□□ -1.5
NEDD9-210ENST00000505589 HIST1H4GQ99525 98 aa5.71□□□□□ -1.5
NEDD9-210ENST00000505589 SPANXDQ9BXN6 97 aa5.71□□□□□ -1.5
NEDD9-210ENST00000505589 SPANXCQ9NY87 97 aa5.71□□□□□ -1.5
NEDD9-210ENST00000505589 ANAPC11Q9NYG5 84 aa5.71□□□□□ -1.5
NEDD9-210ENST00000505589 IGLV5-37A0A075B6J1 123 aa5.7□□□□□ -1.5
NEDD9-210ENST00000505589 HINT1P49773 126 aaPredicted RBP5.7□□□□□ -1.5
NEDD9-210ENST00000505589 ASB16-AS1Q495Z4 193 aa5.7□□□□□ -1.5
NEDD9-210ENST00000505589 MEIG1Q5JSS6 88 aa5.7□□□□□ -1.5
NEDD9-210ENST00000505589 BVES-AS1Q5T3Y7 98 aa5.7□□□□□ -1.5
NEDD9-210ENST00000505589 Q6ZVH6 145 aa5.7□□□□□ -1.5
NEDD9-210ENST00000505589 ERG28Q9UKR5 140 aa5.7□□□□□ -1.5
NEDD9-210ENST00000505589 SMIM13P0DJ93 91 aa5.69□□□□□ -1.5
NEDD9-210ENST00000505589 ADAMTSL4-AS1Q5T5F5 129 aa5.69□□□□□ -1.5
NEDD9-210ENST00000505589 KRTAP13-1Q8IUC0 172 aa5.69□□□□□ -1.5
NEDD9-210ENST00000505589 CEND1Q8N111 149 aa5.69□□□□□ -1.5
NEDD9-210ENST00000505589 SNHG12Q9BXW3 62 aa5.69□□□□□ -1.5
NEDD9-210ENST00000505589 RPL24P83731 157 aaKnown RBP5.68□□□□□ -1.5
NEDD9-210ENST00000505589 BATFQ16520 125 aa5.68□□□□□ -1.5
NEDD9-210ENST00000505589 GAGE10A6NGK3 116 aa5.67□□□□□ -1.5
NEDD9-210ENST00000505589 IFITM1P13164 125 aa5.67□□□□□ -1.5
NEDD9-210ENST00000505589 FXYD2P54710 66 aa5.67□□□□□ -1.5
NEDD9-210ENST00000505589 COX17Q14061 63 aa5.67□□□□□ -1.5
NEDD9-210ENST00000505589 FAM19A1Q7Z5A9 133 aa5.67□□□□□ -1.5
NEDD9-210ENST00000505589 DAND5Q8N907 189 aa5.67□□□□□ -1.5
NEDD9-210ENST00000505589 COPS9Q8WXC6 57 aa5.67□□□□□ -1.5
NEDD9-210ENST00000505589 A0A0U1RRA0 63 aa5.66□□□□□ -1.5
NEDD9-210ENST00000505589 TMEM238LA0A1B0GVL6 79 aa5.66□□□□□ -1.5
NEDD9-210ENST00000505589 SPINK1P00995 79 aa5.66□□□□□ -1.5
NEDD9-210ENST00000505589 PFN2P35080 140 aa5.66□□□□□ -1.5
NEDD9-210ENST00000505589 LINC00158P58513 81 aa5.66□□□□□ -1.5
NEDD9-210ENST00000505589 MIR7-3HGQ8N6C7 128 aa5.66□□□□□ -1.5
NEDD9-210ENST00000505589 LINC00308Q8TCZ7 52 aa5.66□□□□□ -1.5
NEDD9-210ENST00000505589 ZNF706Q9Y5V0 76 aaPredicted RBP5.66□□□□□ -1.5
NEDD9-210ENST00000505589 IGKV2-28A0A075B6P5 120 aa5.65□□□□□ -1.5
NEDD9-210ENST00000505589 A6NDN8 102 aa5.65□□□□□ -1.5
NEDD9-210ENST00000505589 IGKV2D-28P01615 120 aa5.65□□□□□ -1.5
NEDD9-210ENST00000505589 MUSTN1Q8IVN3 82 aa5.65□□□□□ -1.5
NEDD9-210ENST00000505589 A0A1B0GWB2 263 aa5.64□□□□□ -1.51
NEDD9-210ENST00000505589 NPC2P61916 151 aa5.64□□□□□ -1.51
NEDD9-210ENST00000505589 COL5A1-AS1Q5SY13 56 aa5.64□□□□□ -1.51
NEDD9-210ENST00000505589 SOSTDC1Q6X4U4 206 aa5.64□□□□□ -1.51
NEDD9-210ENST00000505589 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
NEDD9-210ENST00000505589 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
NEDD9-210ENST00000505589 A4D1N5 150 aa5.63□□□□□ -1.51
NEDD9-210ENST00000505589 EIF4EBP3O60516 100 aaPredicted RBP5.63□□□□□ -1.51
NEDD9-210ENST00000505589 PRLHP81277 87 aa5.63□□□□□ -1.51
NEDD9-210ENST00000505589 TMEM126AQ9H061 195 aa5.63□□□□□ -1.51
NEDD9-210ENST00000505589 NHP2Q9NX24 153 aaKnown RBP5.63□□□□□ -1.51
NEDD9-210ENST00000505589 LOC107984156A0A0G2JMH3 177 aa5.62□□□□□ -1.51
NEDD9-210ENST00000505589 K7ERJ3 54 aa5.62□□□□□ -1.51
NEDD9-210ENST00000505589 CFC1BP0CG36 223 aa5.62□□□□□ -1.51
NEDD9-210ENST00000505589 KRTAP13-3Q3SY46 172 aa5.62□□□□□ -1.51
NEDD9-210ENST00000505589 KRTAP19-1Q8IUB9 90 aa5.62□□□□□ -1.51
NEDD9-210ENST00000505589 ARL17AQ8IVW1 177 aa5.62□□□□□ -1.51
NEDD9-210ENST00000505589 SND1-IT1Q9HBX3 110 aa5.62□□□□□ -1.51
NEDD9-210ENST00000505589 A0A0B4J2C4 111 aa5.61□□□□□ -1.51
NEDD9-210ENST00000505589 HIGD2AQ9BW72 106 aa5.61□□□□□ -1.51
NEDD9-210ENST00000505589 CFC1P0CG37 223 aa5.6□□□□□ -1.51
NEDD9-210ENST00000505589 RPS29P62273 56 aaKnown RBP5.6□□□□□ -1.51
NEDD9-210ENST00000505589 C3orf22Q8N5N4 141 aa5.6□□□□□ -1.51
NEDD9-210ENST00000505589 TAX1BP3O14907 124 aa5.59□□□□□ -1.51
NEDD9-210ENST00000505589 RAB37Q96AX2 223 aa5.59□□□□□ -1.51
NEDD9-210ENST00000505589 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
NEDD9-210ENST00000505589 M0R378 163 aa5.58□□□□□ -1.52
NEDD9-210ENST00000505589 NDUFC2O95298 119 aa5.58□□□□□ -1.52
NEDD9-210ENST00000505589 SSBP3-AS1Q7Z2R9 100 aa5.58□□□□□ -1.52
NEDD9-210ENST00000505589 SPRR4Q96PI1 79 aa5.58□□□□□ -1.52
NEDD9-210ENST00000505589 PRO1854Q9UHT4 67 aa5.58□□□□□ -1.52
NEDD9-210ENST00000505589 VPREB1P12018 145 aa5.57□□□□□ -1.52
NEDD9-210ENST00000505589 Q8NBF4 154 aa5.57□□□□□ -1.52
NEDD9-210ENST00000505589 TRAV13-2A0A0B4J235 113 aa5.56□□□□□ -1.52
NEDD9-210ENST00000505589 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
NEDD9-210ENST00000505589 C9orf118A6NHY6 69 aa5.56□□□□□ -1.52
NEDD9-210ENST00000505589 SLC25A20O43772 301 aa5.56□□□□□ -1.52
NEDD9-210ENST00000505589 Q8NDZ9 215 aa5.56□□□□□ -1.52
NEDD9-210ENST00000505589 TRBV10-2A0A0K0K1G8 114 aa5.54□□□□□ -1.52
NEDD9-210ENST00000505589 H7C2G1 150 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms