RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 RPS27LQ71UM5 84 aaKnown RBP1.35□□□□□ -2.19
LINC01088-202ENST00000505149 UBE2DNLQ8IWF7 75 aa1.35□□□□□ -2.19
LINC01088-202ENST00000505149 RTTNQ86VV8 2226 aa1.35□□□□□ -2.19
LINC01088-202ENST00000505149 PRO3102Q9H379 93 aa1.34□□□□□ -2.19
LINC01088-202ENST00000505149 A0A0G2JMZ2 1700 aa1.34□□□□□ -2.2
LINC01088-202ENST00000505149 C4BP0C0L5 1744 aa1.33□□□□□ -2.2
LINC01088-202ENST00000505149 LOC730098B7Z3J9 87 aa1.33□□□□□ -2.2
LINC01088-202ENST00000505149 RPL37P61927 97 aaKnown RBP1.33□□□□□ -2.2
LINC01088-202ENST00000505149 UNQ6190/PRO20217Q6UXQ8 127 aa1.33□□□□□ -2.2
LINC01088-202ENST00000505149 LINC00575Q6W349 94 aa1.33□□□□□ -2.2
LINC01088-202ENST00000505149 MED13LQ71F56 2210 aa1.33□□□□□ -2.2
LINC01088-202ENST00000505149 KMT2BQ9UMN6 2715 aaPredicted RBP1.32□□□□□ -2.2
LINC01088-202ENST00000505149 LRRC37AA6NMS7 1700 aa1.32□□□□□ -2.2
LINC01088-202ENST00000505149 LYNX1G3V0Z9 82 aa1.32□□□□□ -2.2
LINC01088-202ENST00000505149 J3QKU1 62 aa1.32□□□□□ -2.2
LINC01088-202ENST00000505149 COX6B2Q6YFQ2 88 aa1.32□□□□□ -2.2
LINC01088-202ENST00000505149 USMG5Q96IX5 58 aa1.32□□□□□ -2.2
LINC01088-202ENST00000505149 TTTY10Q9BZA0 68 aa1.32□□□□□ -2.2
LINC01088-202ENST00000505149 TP53AIP1Q9HCN2 124 aa1.32□□□□□ -2.2
LINC01088-202ENST00000505149 F5P12259 2224 aa1.32□□□□□ -2.2
LINC01088-202ENST00000505149 FBN3Q75N90 2809 aa1.32□□□□□ -2.2
LINC01088-202ENST00000505149 SSC5DA1L4H1 1573 aa1.31□□□□□ -2.2
LINC01088-202ENST00000505149 K7EQZ3 153 aa1.31□□□□□ -2.2
LINC01088-202ENST00000505149 LINC01590Q5TEZ4 76 aa1.31□□□□□ -2.2
LINC01088-202ENST00000505149 MINOS1Q5TGZ0 78 aa1.31□□□□□ -2.2
LINC01088-202ENST00000505149 MRPL34Q9BQ48 92 aaKnown RBP1.31□□□□□ -2.2
LINC01088-202ENST00000505149 SORL1Q92673 2214 aa1.31□□□□□ -2.2
LINC01088-202ENST00000505149 FN1P02751 2386 aaKnown RBP1.3□□□□□ -2.2
LINC01088-202ENST00000505149 CCL22O00626 93 aa1.3□□□□□ -2.2
LINC01088-202ENST00000505149 KRTAP13-4Q3LI77 160 aa1.3□□□□□ -2.2
LINC01088-202ENST00000505149 PIGYQ3MUY2 71 aa1.3□□□□□ -2.2
LINC01088-202ENST00000505149 C6orf48Q9UBA6 75 aa1.3□□□□□ -2.2
LINC01088-202ENST00000505149 CACNA1GO43497 2377 aa1.3□□□□□ -2.2
LINC01088-202ENST00000505149 PLXNB2O15031 1838 aa1.29□□□□□ -2.2
LINC01088-202ENST00000505149 PCOTHQ58A44 107 aa1.29□□□□□ -2.2
LINC01088-202ENST00000505149 BAHCC1Q9P281 2608 aa1.28□□□□□ -2.2
LINC01088-202ENST00000505149 POLR2KP53803 58 aaKnown RBP1.28□□□□□ -2.2
LINC01088-202ENST00000505149 ABCA1O95477 2261 aa1.28□□□□□ -2.2
LINC01088-202ENST00000505149 H3BSH0 61 aa1.27□□□□□ -2.21
LINC01088-202ENST00000505149 LYNX1P0DP58 116 aa1.27□□□□□ -2.21
LINC01088-202ENST00000505149 DEFB123Q8N688 67 aa1.27□□□□□ -2.21
LINC01088-202ENST00000505149 GOLGA4Q13439 2230 aaKnown RBP1.27□□□□□ -2.21
LINC01088-202ENST00000505149 H0YAA0 97 aa1.26□□□□□ -2.21
LINC01088-202ENST00000505149 I3L2K1 104 aa1.26□□□□□ -2.21
LINC01088-202ENST00000505149 RPL39P62891 51 aaKnown RBP1.26□□□□□ -2.21
LINC01088-202ENST00000505149 WFDC10BQ8IUB3 73 aa1.26□□□□□ -2.21
LINC01088-202ENST00000505149 WFDC13Q8IUB5 93 aa1.26□□□□□ -2.21
LINC01088-202ENST00000505149 CACNA1CQ13936 2221 aa1.25□□□□□ -2.21
LINC01088-202ENST00000505149 TECTAO75443 2155 aa1.25□□□□□ -2.21
LINC01088-202ENST00000505149 RPL39LQ96EH5 51 aaKnown RBP1.25□□□□□ -2.21
LINC01088-202ENST00000505149 KNTC1P50748 2209 aa1.25□□□□□ -2.21
LINC01088-202ENST00000505149 ASXL3Q9C0F0 2248 aa1.25□□□□□ -2.21
LINC01088-202ENST00000505149 ANKRD17O75179 2603 aaKnown RBP1.25□□□□□ -2.21
LINC01088-202ENST00000505149 URB1O60287 2271 aaKnown RBP1.24□□□□□ -2.21
LINC01088-202ENST00000505149 IGLV5-48A0A075B6I7 105 aa1.24□□□□□ -2.21
LINC01088-202ENST00000505149 KRTAP12-1P59990 96 aa1.24□□□□□ -2.21
LINC01088-202ENST00000505149 DEFB103AP81534 67 aa1.24□□□□□ -2.21
LINC01088-202ENST00000505149 COX6A2Q02221 97 aa1.24□□□□□ -2.21
LINC01088-202ENST00000505149 FCGBPQ9Y6R7 5405 aaPredicted RBP1.23□□□□□ -2.21
LINC01088-202ENST00000505149 BPTFQ12830 3046 aa1.23□□□□□ -2.21
LINC01088-202ENST00000505149 SPINK9Q5DT21 86 aa1.23□□□□□ -2.21
LINC01088-202ENST00000505149 Q6ZSA8 131 aa1.23□□□□□ -2.21
LINC01088-202ENST00000505149 CADP27708 2225 aa1.23□□□□□ -2.21
LINC01088-202ENST00000505149 TNRC6CQ9HCJ0 1690 aaKnown RBP1.23□□□□□ -2.21
LINC01088-202ENST00000505149 ICE1Q9Y2F5 2266 aa1.22□□□□□ -2.21
LINC01088-202ENST00000505149 RPS27P42677 84 aaKnown RBP1.22□□□□□ -2.21
LINC01088-202ENST00000505149 PRCDQ00LT1 54 aa1.22□□□□□ -2.21
LINC01088-202ENST00000505149 KRTAP21-3Q3LHN1 58 aa1.22□□□□□ -2.21
LINC01088-202ENST00000505149 H1FX-AS1Q4G0G2 97 aa1.22□□□□□ -2.21
LINC01088-202ENST00000505149 C10orf95Q9H7T3 257 aa1.22□□□□□ -2.21
LINC01088-202ENST00000505149 KAAG1Q9UBP8 84 aa1.22□□□□□ -2.21
LINC01088-202ENST00000505149 CACNA1EQ15878 2313 aa1.22□□□□□ -2.21
LINC01088-202ENST00000505149 ASCC3Q8N3C0 2202 aaKnown RBP1.21□□□□□ -2.21
LINC01088-202ENST00000505149 DEFB130BP0DP73 79 aa1.21□□□□□ -2.22
LINC01088-202ENST00000505149 DEFB130AP0DP74 79 aa1.21□□□□□ -2.22
LINC01088-202ENST00000505149 DEFB131AP59861 70 aa1.21□□□□□ -2.22
LINC01088-202ENST00000505149 LEAP2Q969E1 77 aa1.21□□□□□ -2.22
LINC01088-202ENST00000505149 APLNQ9ULZ1 77 aa1.21□□□□□ -2.22
LINC01088-202ENST00000505149 K7EIL1 84 aa1.2□□□□□ -2.22
LINC01088-202ENST00000505149 LELP1Q5T871 98 aa1.2□□□□□ -2.22
LINC01088-202ENST00000505149 PRO0255Q9UI72 69 aa1.2□□□□□ -2.22
LINC01088-202ENST00000505149 H3BUA1 57 aa1.19□□□□□ -2.22
LINC01088-202ENST00000505149 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.19□□□□□ -2.22
LINC01088-202ENST00000505149 TENM1Q9UKZ4 2725 aa1.19□□□□□ -2.22
LINC01088-202ENST00000505149 ALMS1Q8TCU4 4167 aa1.18□□□□□ -2.22
LINC01088-202ENST00000505149 AHCTF1Q8WYP5 2266 aa1.18□□□□□ -2.22
LINC01088-202ENST00000505149 M0QY20 66 aa1.18□□□□□ -2.22
LINC01088-202ENST00000505149 WT1-ASQ06250 92 aa1.18□□□□□ -2.22
LINC01088-202ENST00000505149 DEFB105AQ8NG35 78 aa1.18□□□□□ -2.22
LINC01088-202ENST00000505149 SPRR1AP35321 89 aa1.17□□□□□ -2.22
LINC01088-202ENST00000505149 CACNA1BQ00975 2339 aa1.16□□□□□ -2.22
LINC01088-202ENST00000505149 MMP24-AS1A0A0U1RRL7 71 aa1.16□□□□□ -2.22
LINC01088-202ENST00000505149 CNOT1A5YKK6 2376 aaKnown RBP1.16□□□□□ -2.22
LINC01088-202ENST00000505149 DEFB109BQ30KR1 87 aa1.15□□□□□ -2.23
LINC01088-202ENST00000505149 Q5VSD8 79 aa1.15□□□□□ -2.23
LINC01088-202ENST00000505149 DEFB119Q8N690 84 aa1.15□□□□□ -2.23
LINC01088-202ENST00000505149 TOMM7Q9P0U1 55 aa1.15□□□□□ -2.23
LINC01088-202ENST00000505149 WNK2Q9Y3S1 2297 aa1.15□□□□□ -2.23
LINC01088-202ENST00000505149 FLG2Q5D862 2391 aaPredicted RBP1.14□□□□□ -2.23
LINC01088-202ENST00000505149 SPRR1BP22528 89 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms