RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 KCNQ1DNQ9H478 68 aa3.24□□□□□ -1.89
GYPB-204ENST00000504951 USH2AO75445 5202 aa3.24□□□□□ -1.89
GYPB-204ENST00000504951 IGLV9-49A0A0B4J1Y8 123 aa3.23□□□□□ -1.89
GYPB-204ENST00000504951 TMEM223A0PJW6 202 aa3.23□□□□□ -1.89
GYPB-204ENST00000504951 S100PP25815 95 aa3.23□□□□□ -1.89
GYPB-204ENST00000504951 MOBPQ13875 183 aa3.23□□□□□ -1.89
GYPB-204ENST00000504951 MIR7-3HGQ8N6C7 128 aa3.23□□□□□ -1.89
GYPB-204ENST00000504951 Q9BRP9 147 aa3.23□□□□□ -1.89
GYPB-204ENST00000504951 ETDCA0A1B0GVM5 59 aa3.22□□□□□ -1.89
GYPB-204ENST00000504951 IFITM2Q01629 132 aa3.22□□□□□ -1.89
GYPB-204ENST00000504951 SFTA2Q6UW10 78 aa3.22□□□□□ -1.89
GYPB-204ENST00000504951 UQCC3Q6UW78 93 aa3.22□□□□□ -1.89
GYPB-204ENST00000504951 SEC11CQ9BY50 192 aa3.22□□□□□ -1.89
GYPB-204ENST00000504951 CHTOPQ9Y3Y2 248 aaKnown RBP3.22□□□□□ -1.89
GYPB-204ENST00000504951 COX19Q49B96 90 aa3.21□□□□□ -1.9
GYPB-204ENST00000504951 RPS10P5Q9NQ39 176 aa3.21□□□□□ -1.9
GYPB-204ENST00000504951 TRAPPC1Q9Y5R8 145 aa3.21□□□□□ -1.9
GYPB-204ENST00000504951 TSPEAR-AS2P59090 65 aa3.2□□□□□ -1.9
GYPB-204ENST00000504951 MEIG1Q5JSS6 88 aa3.2□□□□□ -1.9
GYPB-204ENST00000504951 C10orf91Q5T1B1 145 aa3.2□□□□□ -1.9
GYPB-204ENST00000504951 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
GYPB-204ENST00000504951 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
GYPB-204ENST00000504951 TRAV12-1A0A0B4J245 112 aa3.19□□□□□ -1.9
GYPB-204ENST00000504951 ATP6V1G1O75348 118 aa3.19□□□□□ -1.9
GYPB-204ENST00000504951 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
GYPB-204ENST00000504951 Q6ZRX8 168 aa3.19□□□□□ -1.9
GYPB-204ENST00000504951 COMMD7Q86VX2 200 aa3.19□□□□□ -1.9
GYPB-204ENST00000504951 ST20-AS1Q8NBB2 130 aa3.19□□□□□ -1.9
GYPB-204ENST00000504951 IFI27L1Q96BM0 104 aa3.19□□□□□ -1.9
GYPB-204ENST00000504951 SYNE2Q8WXH0 6885 aaKnown RBP3.18□□□□□ -1.9
GYPB-204ENST00000504951 LOC107984156A0A0G2JMH3 177 aa3.18□□□□□ -1.9
GYPB-204ENST00000504951 DDTP30046 118 aa3.18□□□□□ -1.9
GYPB-204ENST00000504951 HERV-K104P63124 156 aa3.18□□□□□ -1.9
GYPB-204ENST00000504951 RHEBQ15382 184 aa3.18□□□□□ -1.9
GYPB-204ENST00000504951 COX6B2Q6YFQ2 88 aa3.18□□□□□ -1.9
GYPB-204ENST00000504951 ARL17AQ8IVW1 177 aa3.18□□□□□ -1.9
GYPB-204ENST00000504951 LINC00846Q9NV44 126 aa3.18□□□□□ -1.9
GYPB-204ENST00000504951 TRBV10-2A0A0K0K1G8 114 aa3.17□□□□□ -1.9
GYPB-204ENST00000504951 C9orf92A6NGG3 77 aa3.17□□□□□ -1.9
GYPB-204ENST00000504951 IGLV6-57P01721 117 aa3.17□□□□□ -1.9
GYPB-204ENST00000504951 C9orf153Q5TBE3 101 aa3.17□□□□□ -1.9
GYPB-204ENST00000504951 SOSTDC1Q6X4U4 206 aa3.17□□□□□ -1.9
GYPB-204ENST00000504951 YPEL4Q96NS1 127 aa3.17□□□□□ -1.9
GYPB-204ENST00000504951 MYMXA0A1B0GTQ4 84 aa3.16□□□□□ -1.9
GYPB-204ENST00000504951 H0Y8G0 127 aa3.16□□□□□ -1.9
GYPB-204ENST00000504951 NPC2P61916 151 aa3.16□□□□□ -1.9
GYPB-204ENST00000504951 HRCT1Q6UXD1 115 aa3.16□□□□□ -1.9
GYPB-204ENST00000504951 CHCHD1Q96BP2 118 aaKnown RBP3.16□□□□□ -1.9
GYPB-204ENST00000504951 TRAV23DV6A0A075B6W5 121 aa3.15□□□□□ -1.91
GYPB-204ENST00000504951 C5orf52A6NGY3 159 aa3.15□□□□□ -1.91
GYPB-204ENST00000504951 LINC00587B1AMM8 73 aa3.15□□□□□ -1.91
GYPB-204ENST00000504951 LEPROTO15243 131 aa3.15□□□□□ -1.91
GYPB-204ENST00000504951 RPL37P61927 97 aaKnown RBP3.15□□□□□ -1.91
GYPB-204ENST00000504951 ADAMTSL4-AS1Q5T5F5 129 aa3.15□□□□□ -1.91
GYPB-204ENST00000504951 PMCHL2Q9BQD1 86 aa3.15□□□□□ -1.91
GYPB-204ENST00000504951 MAP1LC3CQ9BXW4 147 aa3.15□□□□□ -1.91
GYPB-204ENST00000504951 SPANXB1Q9NS25 103 aaPredicted RBP3.15□□□□□ -1.91
GYPB-204ENST00000504951 J3QQQ9 107 aa3.14□□□□□ -1.91
GYPB-204ENST00000504951 ZNF73O43830 326 aaPredicted RBP3.14□□□□□ -1.91
GYPB-204ENST00000504951 HSBP1O75506 76 aa3.14□□□□□ -1.91
GYPB-204ENST00000504951 NDUFC2O95298 119 aa3.14□□□□□ -1.91
GYPB-204ENST00000504951 APOC3P02656 99 aa3.14□□□□□ -1.91
GYPB-204ENST00000504951 IGKV2-30P06310 120 aa3.14□□□□□ -1.91
GYPB-204ENST00000504951 S100A12P80511 92 aa3.14□□□□□ -1.91
GYPB-204ENST00000504951 KRTAP19-6Q3LI70 58 aa3.14□□□□□ -1.91
GYPB-204ENST00000504951 S100A7L2Q5SY68 101 aa3.14□□□□□ -1.91
GYPB-204ENST00000504951 Q5XG85 94 aa3.14□□□□□ -1.91
GYPB-204ENST00000504951 LIMD2Q9BT23 127 aa3.14□□□□□ -1.91
GYPB-204ENST00000504951 A0A0G2JQZ4 141 aa3.13□□□□□ -1.91
GYPB-204ENST00000504951 A0A0J9YXY3 114 aa3.13□□□□□ -1.91
GYPB-204ENST00000504951 H7C2G1 150 aa3.13□□□□□ -1.91
GYPB-204ENST00000504951 SPRR1BP22528 89 aa3.13□□□□□ -1.91
GYPB-204ENST00000504951 MIEN1Q9BRT3 115 aa3.13□□□□□ -1.91
GYPB-204ENST00000504951 SERF1AO75920 110 aa3.12□□□□□ -1.91
GYPB-204ENST00000504951 LEPROTL1O95214 131 aa3.12□□□□□ -1.91
GYPB-204ENST00000504951 CD164Q04900 197 aa3.12□□□□□ -1.91
GYPB-204ENST00000504951 JOSD1Q15040 202 aaPredicted RBP3.12□□□□□ -1.91
GYPB-204ENST00000504951 LITAFQ99732 161 aa3.12□□□□□ -1.91
GYPB-204ENST00000504951 DPM2O94777 84 aa3.11□□□□□ -1.91
GYPB-204ENST00000504951 SNAPINO95295 136 aa3.11□□□□□ -1.91
GYPB-204ENST00000504951 FABP4P15090 132 aa3.11□□□□□ -1.91
GYPB-204ENST00000504951 LGALS3P17931 250 aaKnown RBP3.11□□□□□ -1.91
GYPB-204ENST00000504951 PLNP26678 52 aa3.11□□□□□ -1.91
GYPB-204ENST00000504951 NMUP48645 174 aa3.11□□□□□ -1.91
GYPB-204ENST00000504951 Q1RN00 199 aa3.11□□□□□ -1.91
GYPB-204ENST00000504951 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
GYPB-204ENST00000504951 IGKCP01834 107 aa3.1□□□□□ -1.91
GYPB-204ENST00000504951 MT2AP02795 61 aa3.1□□□□□ -1.91
GYPB-204ENST00000504951 TRGC2P03986 189 aa3.1□□□□□ -1.91
GYPB-204ENST00000504951 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
GYPB-204ENST00000504951 C1orf195Q5TG92 126 aa3.1□□□□□ -1.91
GYPB-204ENST00000504951 SMIM29Q86T20 159 aa3.1□□□□□ -1.91
GYPB-204ENST00000504951 SVBPQ8N300 66 aa3.1□□□□□ -1.91
GYPB-204ENST00000504951 DEFB105AQ8NG35 78 aa3.1□□□□□ -1.91
GYPB-204ENST00000504951 E9PLD3 99 aa3.09□□□□□ -1.91
GYPB-204ENST00000504951 HERVK_113P61574 105 aa3.09□□□□□ -1.91
GYPB-204ENST00000504951 C6orf99Q4VX62 202 aa3.09□□□□□ -1.91
GYPB-204ENST00000504951 OR13C6PQ8NH95 151 aa3.09□□□□□ -1.91
GYPB-204ENST00000504951 LINC00308Q8TCZ7 52 aa3.09□□□□□ -1.91
GYPB-204ENST00000504951 LAMTOR3Q9UHA4 124 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms