RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 IGLV6-57P01721 117 aa7.49□□□□□ -1.21
PDGFRA-204ENST00000504461 NPC2P61916 151 aa7.49□□□□□ -1.21
PDGFRA-204ENST00000504461 NCR3O14931 201 aa7.48□□□□□ -1.21
PDGFRA-204ENST00000504461 HINT1P49773 126 aaPredicted RBP7.48□□□□□ -1.21
PDGFRA-204ENST00000504461 HIST1H4GQ99525 98 aa7.48□□□□□ -1.21
PDGFRA-204ENST00000504461 TRAV13-2A0A0B4J235 113 aa7.47□□□□□ -1.21
PDGFRA-204ENST00000504461 TRBV10-3A0A0K0K1G6 114 aa7.47□□□□□ -1.21
PDGFRA-204ENST00000504461 EIF4EBP3O60516 100 aaPredicted RBP7.47□□□□□ -1.21
PDGFRA-204ENST00000504461 SMIM6P0DI80 62 aa7.47□□□□□ -1.21
PDGFRA-204ENST00000504461 TAL2Q16559 108 aa7.47□□□□□ -1.21
PDGFRA-204ENST00000504461 LINC00337Q8N6G1 96 aa7.47□□□□□ -1.21
PDGFRA-204ENST00000504461 UBE2AP49459 152 aa7.46□□□□□ -1.22
PDGFRA-204ENST00000504461 OR13C6PQ8NH95 151 aa7.46□□□□□ -1.22
PDGFRA-204ENST00000504461 SPRR1AP35321 89 aa7.45□□□□□ -1.22
PDGFRA-204ENST00000504461 RPL13AP40429 203 aaKnown RBP7.45□□□□□ -1.22
PDGFRA-204ENST00000504461 UQCR10Q9UDW1 63 aa7.45□□□□□ -1.22
PDGFRA-204ENST00000504461 KRTAP1-4P0C5Y4 121 aa7.44□□□□□ -1.22
PDGFRA-204ENST00000504461 FAM19A1Q7Z5A9 133 aa7.44□□□□□ -1.22
PDGFRA-204ENST00000504461 TRAV23DV6A0A075B6W5 121 aa7.43□□□□□ -1.22
PDGFRA-204ENST00000504461 ETDCA0A1B0GVM5 59 aa7.43□□□□□ -1.22
PDGFRA-204ENST00000504461 A6NDN8 102 aa7.43□□□□□ -1.22
PDGFRA-204ENST00000504461 TMEM238LA0A1B0GVL6 79 aa7.42□□□□□ -1.22
PDGFRA-204ENST00000504461 A6NJY4 79 aa7.42□□□□□ -1.22
PDGFRA-204ENST00000504461 ZNF73O43830 326 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-204ENST00000504461 TRBV7-6A0A0J9YX20 115 aa7.41□□□□□ -1.22
PDGFRA-204ENST00000504461 LOC105371267A0A1B0GV96 52 aa7.41□□□□□ -1.22
PDGFRA-204ENST00000504461 A4D1N5 150 aa7.41□□□□□ -1.22
PDGFRA-204ENST00000504461 KRTAP13-1Q8IUC0 172 aa7.41□□□□□ -1.22
PDGFRA-204ENST00000504461 KRTAP4-16G5E9R7 235 aaPredicted RBP7.4□□□□□ -1.22
PDGFRA-204ENST00000504461 C2orf91Q6ZV80 131 aa7.4□□□□□ -1.22
PDGFRA-204ENST00000504461 VAMP3Q15836 100 aa7.39□□□□□ -1.23
PDGFRA-204ENST00000504461 CEND1Q8N111 149 aa7.39□□□□□ -1.23
PDGFRA-204ENST00000504461 LRP2P98164 4655 aa7.38□□□□□ -1.23
PDGFRA-204ENST00000504461 B5MCH6 92 aa7.38□□□□□ -1.23
PDGFRA-204ENST00000504461 HSD52Q0P140 79 aa7.38□□□□□ -1.23
PDGFRA-204ENST00000504461 PRR4Q16378 134 aa7.38□□□□□ -1.23
PDGFRA-204ENST00000504461 ZNF706Q9Y5V0 76 aaPredicted RBP7.38□□□□□ -1.23
PDGFRA-204ENST00000504461 PRLHP81277 87 aa7.37□□□□□ -1.23
PDGFRA-204ENST00000504461 Q6ZRX8 168 aa7.37□□□□□ -1.23
PDGFRA-204ENST00000504461 RAB37Q96AX2 223 aa7.37□□□□□ -1.23
PDGFRA-204ENST00000504461 DHRS4-AS1Q9P1J3 65 aa7.37□□□□□ -1.23
PDGFRA-204ENST00000504461 CRYGAP11844 174 aa7.36□□□□□ -1.23
PDGFRA-204ENST00000504461 A0A0B4J2C4 111 aa7.35□□□□□ -1.23
PDGFRA-204ENST00000504461 A0A1B0GWB2 263 aa7.35□□□□□ -1.23
PDGFRA-204ENST00000504461 TSTD3H0UI37 97 aa7.35□□□□□ -1.23
PDGFRA-204ENST00000504461 TSPAN13O95857 204 aa7.35□□□□□ -1.23
PDGFRA-204ENST00000504461 C6orf99Q4VX62 202 aa7.35□□□□□ -1.23
PDGFRA-204ENST00000504461 TYMSOSQ8TAI1 123 aa7.35□□□□□ -1.23
PDGFRA-204ENST00000504461 HIGD2AQ9BW72 106 aa7.35□□□□□ -1.23
PDGFRA-204ENST00000504461 CFC1BP0CG36 223 aa7.34□□□□□ -1.23
PDGFRA-204ENST00000504461 CFC1P0CG37 223 aa7.34□□□□□ -1.23
PDGFRA-204ENST00000504461 COX7BP24311 80 aa7.34□□□□□ -1.23
PDGFRA-204ENST00000504461 SMCR5Q8TEV8 140 aa7.34□□□□□ -1.23
PDGFRA-204ENST00000504461 C12orf57Q99622 126 aa7.34□□□□□ -1.23
PDGFRA-204ENST00000504461 NHP2Q9NX24 153 aaKnown RBP7.34□□□□□ -1.23
PDGFRA-204ENST00000504461 A0A087X002 238 aa7.33□□□□□ -1.24
PDGFRA-204ENST00000504461 SNCGO76070 127 aa7.33□□□□□ -1.24
PDGFRA-204ENST00000504461 ELOF1P60002 83 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-204ENST00000504461 FAM229BQ4G0N7 80 aa7.33□□□□□ -1.24
PDGFRA-204ENST00000504461 BVES-AS1Q5T3Y7 98 aa7.33□□□□□ -1.24
PDGFRA-204ENST00000504461 SMIM11BQ8TCY0 68 aa7.33□□□□□ -1.24
PDGFRA-204ENST00000504461 PRO1854Q9UHT4 67 aa7.33□□□□□ -1.24
PDGFRA-204ENST00000504461 RNF213Q63HN8 5207 aa7.31□□□□□ -1.24
PDGFRA-204ENST00000504461 SLC25A20O43772 301 aa7.31□□□□□ -1.24
PDGFRA-204ENST00000504461 PRO1933Q9H354 126 aa7.31□□□□□ -1.24
PDGFRA-204ENST00000504461 ANAPC11Q9NYG5 84 aa7.31□□□□□ -1.24
PDGFRA-204ENST00000504461 H0YGX0 51 aa7.3□□□□□ -1.24
PDGFRA-204ENST00000504461 M0R143 59 aa7.3□□□□□ -1.24
PDGFRA-204ENST00000504461 Q9BRP9 147 aa7.3□□□□□ -1.24
PDGFRA-204ENST00000504461 FXYD2P54710 66 aa7.29□□□□□ -1.24
PDGFRA-204ENST00000504461 SPRR4Q96PI1 79 aa7.29□□□□□ -1.24
PDGFRA-204ENST00000504461 LPAP08519 4548 aa7.29□□□□□ -1.24
PDGFRA-204ENST00000504461 KRTAP13-2Q52LG2 175 aa7.27□□□□□ -1.25
PDGFRA-204ENST00000504461 LINC00483Q53H64 154 aa7.27□□□□□ -1.25
PDGFRA-204ENST00000504461 COX6CP09669 75 aa7.26□□□□□ -1.25
PDGFRA-204ENST00000504461 CTAG1AP78358 180 aa7.26□□□□□ -1.25
PDGFRA-204ENST00000504461 Q1RN00 199 aa7.26□□□□□ -1.25
PDGFRA-204ENST00000504461 H7C2G1 150 aa7.25□□□□□ -1.25
PDGFRA-204ENST00000504461 ERC2-IT1O76042 136 aa7.25□□□□□ -1.25
PDGFRA-204ENST00000504461 GHRHP01286 108 aa7.25□□□□□ -1.25
PDGFRA-204ENST00000504461 GAGE2AQ6NT46 116 aa7.25□□□□□ -1.25
PDGFRA-204ENST00000504461 LINC00575Q6W349 94 aa7.25□□□□□ -1.25
PDGFRA-204ENST00000504461 LINC00304Q8N9R0 145 aa7.25□□□□□ -1.25
PDGFRA-204ENST00000504461 hADV29S1A0JD25 119 aa7.24□□□□□ -1.25
PDGFRA-204ENST00000504461 TEX49A0A1B0GTD5 131 aa7.23□□□□□ -1.25
PDGFRA-204ENST00000504461 A0A1B0GX51 115 aa7.23□□□□□ -1.25
PDGFRA-204ENST00000504461 SPRR1BP22528 89 aa7.23□□□□□ -1.25
PDGFRA-204ENST00000504461 OCIAD2Q56VL3 154 aa7.22□□□□□ -1.25
PDGFRA-204ENST00000504461 PSMB2P49721 201 aa7.21□□□□□ -1.26
PDGFRA-204ENST00000504461 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.21□□□□□ -1.26
PDGFRA-204ENST00000504461 SSBP3-AS1Q7Z2R9 100 aa7.21□□□□□ -1.26
PDGFRA-204ENST00000504461 PPDPFLQ8WWR9 84 aa7.21□□□□□ -1.26
PDGFRA-204ENST00000504461 LAMTOR3Q9UHA4 124 aa7.21□□□□□ -1.26
PDGFRA-204ENST00000504461 SPAG11AQ6PDA7 123 aa7.2□□□□□ -1.26
PDGFRA-204ENST00000504461 RETNLBQ9BQ08 111 aa7.2□□□□□ -1.26
PDGFRA-204ENST00000504461 IGLV5-48A0A075B6I7 105 aa7.19□□□□□ -1.26
PDGFRA-204ENST00000504461 H3BQ85 93 aa7.19□□□□□ -1.26
PDGFRA-204ENST00000504461 ST20-AS1Q8NBB2 130 aa7.19□□□□□ -1.26
PDGFRA-204ENST00000504461 K7ERJ3 54 aa7.18□□□□□ -1.26
PDGFRA-204ENST00000504461 SCGB1C2P0DMR2 95 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms