RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, human

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2J3-209	ENST00000504157		X6R8D5	127 aa		11.86	□□□□□ -0.51
POLR2J3-209	ENST00000504157	SON	P18583	2426 aa	Known RBP	11.85	□□□□□ -0.51
POLR2J3-209	ENST00000504157	KLK12	Q9UKR0	248 aa		11.84	□□□□□ -0.51
POLR2J3-209	ENST00000504157	LYRM9	A8MSI8	78 aa		11.84	□□□□□ -0.51
POLR2J3-209	ENST00000504157	HIVEP1	P15822	2718 aa		11.83	□□□□□ -0.52
POLR2J3-209	ENST00000504157	PSCA	O43653	123 aa		11.82	□□□□□ -0.52
POLR2J3-209	ENST00000504157	C3orf84	H3BNL1	204 aa		11.81	□□□□□ -0.52
POLR2J3-209	ENST00000504157	PRR34	Q9NV39	138 aa		11.81	□□□□□ -0.52
POLR2J3-209	ENST00000504157	LINC00528	Q8N1L1	170 aa		11.8	□□□□□ -0.52
POLR2J3-209	ENST00000504157	C6orf48	Q9UBA6	75 aa		11.8	□□□□□ -0.52
POLR2J3-209	ENST00000504157	SYCN	Q0VAF6	134 aa		11.79	□□□□□ -0.52
POLR2J3-209	ENST00000504157	ETDC	A0A1B0GVM5	59 aa		11.78	□□□□□ -0.52
POLR2J3-209	ENST00000504157	RETN	Q9HD89	108 aa		11.78	□□□□□ -0.52
POLR2J3-209	ENST00000504157		A0A1B0GW54	56 aa		11.77	□□□□□ -0.53
POLR2J3-209	ENST00000504157		A8MUN3	132 aa		11.77	□□□□□ -0.53
POLR2J3-209	ENST00000504157	VPREB1	P12018	145 aa		11.77	□□□□□ -0.53
POLR2J3-209	ENST00000504157	XAGE1A	Q9HD64	81 aa		11.77	□□□□□ -0.53
POLR2J3-209	ENST00000504157	ANK3	Q12955	4377 aa	Known RBP	11.77	□□□□□ -0.53
POLR2J3-209	ENST00000504157	HIVEP2	P31629	2446 aa		11.77	□□□□□ -0.53
POLR2J3-209	ENST00000504157	LELP1	Q5T871	98 aa		11.76	□□□□□ -0.53
POLR2J3-209	ENST00000504157	JMJD1C	Q15652	2540 aa		11.76	□□□□□ -0.53
POLR2J3-209	ENST00000504157	MTOR	P42345	2549 aa		11.75	□□□□□ -0.53
POLR2J3-209	ENST00000504157	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.75	□□□□□ -0.53
POLR2J3-209	ENST00000504157		M0R378	163 aa		11.75	□□□□□ -0.53
POLR2J3-209	ENST00000504157	F8	P00451	2351 aa		11.75	□□□□□ -0.53
POLR2J3-209	ENST00000504157	UBE2B	P63146	152 aa		11.75	□□□□□ -0.53
POLR2J3-209	ENST00000504157		Q5VV11	94 aa		11.74	□□□□□ -0.53
POLR2J3-209	ENST00000504157	IGLV5-48	A0A075B6I7	105 aa		11.73	□□□□□ -0.53
POLR2J3-209	ENST00000504157	CUBN	O60494	3623 aa		11.73	□□□□□ -0.53
POLR2J3-209	ENST00000504157		A8MU10	97 aa		11.72	□□□□□ -0.53
POLR2J3-209	ENST00000504157	MRPL55	Q7Z7F7	128 aa	Known RBP	11.72	□□□□□ -0.53
POLR2J3-209	ENST00000504157	LINC00588	Q9Y4M8	146 aa		11.71	□□□□□ -0.53
POLR2J3-209	ENST00000504157	MAST4	O15021	2626 aa		11.71	□□□□□ -0.53
POLR2J3-209	ENST00000504157	INAFM1	C9JVW0	142 aa		11.71	□□□□□ -0.54
POLR2J3-209	ENST00000504157	KTN1-AS1	Q86SY8	53 aa		11.71	□□□□□ -0.54
POLR2J3-209	ENST00000504157	NDUFB1	O75438	58 aa		11.7	□□□□□ -0.54
POLR2J3-209	ENST00000504157	KPRP	Q5T749	579 aa	Predicted RBP	11.7	□□□□□ -0.54
POLR2J3-209	ENST00000504157	EGFEM1P	Q0D2K5	195 aa		11.7	□□□□□ -0.54
POLR2J3-209	ENST00000504157	PRR4	Q16378	134 aa		11.68	□□□□□ -0.54
POLR2J3-209	ENST00000504157	NSD1	Q96L73	2696 aa	Predicted RBP	11.68	□□□□□ -0.54
POLR2J3-209	ENST00000504157	UBE2A	P49459	152 aa		11.67	□□□□□ -0.54
POLR2J3-209	ENST00000504157	ST20-AS1	Q8NBB2	130 aa		11.67	□□□□□ -0.54
POLR2J3-209	ENST00000504157		Q8N377	158 aa		11.67	□□□□□ -0.54
POLR2J3-209	ENST00000504157	FN1	P02751	2386 aa	Known RBP	11.67	□□□□□ -0.54
POLR2J3-209	ENST00000504157	NIPBL	Q6KC79	2804 aa	eCLIP	11.66	□□□□□ -0.54
POLR2J3-209	ENST00000504157		A0A1W2PNM2	257 aa		11.66	□□□□□ -0.54
POLR2J3-209	ENST00000504157	DSCR10	P59022	87 aa		11.66	□□□□□ -0.54
POLR2J3-209	ENST00000504157	RBM12B-AS1	Q9P1G2	102 aa		11.65	□□□□□ -0.54
POLR2J3-209	ENST00000504157	TEP1	Q99973	2627 aa	Known RBP	11.64	□□□□□ -0.55
POLR2J3-209	ENST00000504157	C16orf90	A8MZG2	172 aa		11.64	□□□□□ -0.55
POLR2J3-209	ENST00000504157	CAMK2N2	Q96S95	79 aa		11.64	□□□□□ -0.55
POLR2J3-209	ENST00000504157	LIMD2	Q9BT23	127 aa		11.63	□□□□□ -0.55
POLR2J3-209	ENST00000504157	B9D2	Q9BPU9	175 aa		11.63	□□□□□ -0.55
POLR2J3-209	ENST00000504157	NF1	P21359	2839 aa		11.62	□□□□□ -0.55
POLR2J3-209	ENST00000504157	CHKB-CPT1B	H3BT56	60 aa		11.62	□□□□□ -0.55
POLR2J3-209	ENST00000504157		Q8N9P0	234 aa	Predicted RBP	11.62	□□□□□ -0.55
POLR2J3-209	ENST00000504157		K7EQZ3	153 aa		11.61	□□□□□ -0.55
POLR2J3-209	ENST00000504157	DEFB105A	Q8NG35	78 aa		11.6	□□□□□ -0.55
POLR2J3-209	ENST00000504157	DEFB4A	O15263	64 aa		11.6	□□□□□ -0.55
POLR2J3-209	ENST00000504157	ATP11AUN	Q6ZP68	121 aa		11.59	□□□□□ -0.55
POLR2J3-209	ENST00000504157		Q8NBF4	154 aa		11.59	□□□□□ -0.55
POLR2J3-209	ENST00000504157	SPRR4	Q96PI1	79 aa		11.59	□□□□□ -0.55
POLR2J3-209	ENST00000504157	KCNQ1DN	Q9H478	68 aa		11.59	□□□□□ -0.55
POLR2J3-209	ENST00000504157	HCG22	E2RYF7	251 aa		11.59	□□□□□ -0.55
POLR2J3-209	ENST00000504157	DEFB135	Q30KP9	77 aa		11.59	□□□□□ -0.55
POLR2J3-209	ENST00000504157	KRTAP26-1	Q6PEX3	210 aa		11.59	□□□□□ -0.55
POLR2J3-209	ENST00000504157		Q8NAQ8	132 aa		11.58	□□□□□ -0.56
POLR2J3-209	ENST00000504157	TNP2	Q05952	138 aa		11.58	□□□□□ -0.56
POLR2J3-209	ENST00000504157	NDUFS5	O43920	106 aa		11.57	□□□□□ -0.56
POLR2J3-209	ENST00000504157	APOC4	P55056	127 aa		11.57	□□□□□ -0.56
POLR2J3-209	ENST00000504157	C1orf137	Q5JT78	98 aa		11.57	□□□□□ -0.56
POLR2J3-209	ENST00000504157	PRB2	P02812	416 aa	Predicted RBP	11.56	□□□□□ -0.56
POLR2J3-209	ENST00000504157	SPANXA2-OT1	Q8N9U9	137 aa		11.56	□□□□□ -0.56
POLR2J3-209	ENST00000504157	SPART-AS1	P0CW21	52 aa		11.56	□□□□□ -0.56
POLR2J3-209	ENST00000504157	PHF5A	Q7RTV0	110 aa	Known RBP	11.55	□□□□□ -0.56
POLR2J3-209	ENST00000504157	MP68	P56378	58 aa		11.55	□□□□□ -0.56
POLR2J3-209	ENST00000504157	C15orf56	Q8N910	161 aa		11.55	□□□□□ -0.56
POLR2J3-209	ENST00000504157		Q9BRP9	147 aa		11.55	□□□□□ -0.56
POLR2J3-209	ENST00000504157	LINC00208	Q96KT6	92 aa		11.54	□□□□□ -0.56
POLR2J3-209	ENST00000504157	LCA10	Q71F78	164 aa		11.53	□□□□□ -0.56
POLR2J3-209	ENST00000504157	PRR15L	Q9BU68	103 aa		11.53	□□□□□ -0.56
POLR2J3-209	ENST00000504157	DHRS4-AS1	Q9P1J3	65 aa		11.53	□□□□□ -0.56
POLR2J3-209	ENST00000504157		A6NN06	94 aa		11.52	□□□□□ -0.56
POLR2J3-209	ENST00000504157		Q75L30	129 aa		11.52	□□□□□ -0.56
POLR2J3-209	ENST00000504157	SPTSSB	Q8NFR3	76 aa		11.52	□□□□□ -0.57
POLR2J3-209	ENST00000504157	HTN3	P15516	51 aa		11.51	□□□□□ -0.57
POLR2J3-209	ENST00000504157	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.49	□□□□□ -0.57
POLR2J3-209	ENST00000504157	LOC101927531	A0A1B0GV80	90 aa		11.48	□□□□□ -0.57
POLR2J3-209	ENST00000504157	KRTAP10-3	P60369	221 aa		11.48	□□□□□ -0.57
POLR2J3-209	ENST00000504157	NKAPP1	Q8N9T2	125 aa		11.48	□□□□□ -0.57
POLR2J3-209	ENST00000504157	C7orf33	Q8WU49	177 aa		11.48	□□□□□ -0.57
POLR2J3-209	ENST00000504157		Q6ZRX8	168 aa		11.47	□□□□□ -0.57
POLR2J3-209	ENST00000504157	PLA2G2D	Q9UNK4	145 aa		11.47	□□□□□ -0.57
POLR2J3-209	ENST00000504157	NBEAL2	Q6ZNJ1	2754 aa		11.47	□□□□□ -0.57
POLR2J3-209	ENST00000504157		H3BPC8	53 aa		11.46	□□□□□ -0.57
POLR2J3-209	ENST00000504157	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	11.45	□□□□□ -0.58
POLR2J3-209	ENST00000504157		H3BNG1	76 aa		11.45	□□□□□ -0.58
POLR2J3-209	ENST00000504157	WFDC10B	Q8IUB3	73 aa		11.45	□□□□□ -0.58
POLR2J3-209	ENST00000504157		A6NED7	52 aa		11.44	□□□□□ -0.58
POLR2J3-209	ENST00000504157	SPRR1A	P35321	89 aa		11.43	□□□□□ -0.58

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