RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 Q6ZQY7 126 aa1.17□□□□□ -2.22
ATXN3-208ENST00000504047 Q8IZM0 81 aa1.17□□□□□ -2.22
ATXN3-208ENST00000504047 FDCSPQ8NFU4 85 aa1.17□□□□□ -2.22
ATXN3-208ENST00000504047 LINC00208Q96KT6 92 aa1.17□□□□□ -2.22
ATXN3-208ENST00000504047 B9D2Q9BPU9 175 aa1.17□□□□□ -2.22
ATXN3-208ENST00000504047 PRR15LQ9BU68 103 aa1.17□□□□□ -2.22
ATXN3-208ENST00000504047 KIAA0100Q14667 2235 aaKnown RBP1.17□□□□□ -2.22
ATXN3-208ENST00000504047 WDR87Q6ZQQ6 2873 aa1.17□□□□□ -2.22
ATXN3-208ENST00000504047 CFAP54Q96N23 3096 aa1.17□□□□□ -2.22
ATXN3-208ENST00000504047 IGHV6-1A0A0B4J1U7 121 aa1.16□□□□□ -2.22
ATXN3-208ENST00000504047 LYNX1G3V0Z9 82 aa1.16□□□□□ -2.22
ATXN3-208ENST00000504047 C3orf84H3BNL1 204 aa1.16□□□□□ -2.22
ATXN3-208ENST00000504047 C19orf84I3L1E1 186 aa1.16□□□□□ -2.22
ATXN3-208ENST00000504047 LYNX1P0DP58 116 aa1.16□□□□□ -2.22
ATXN3-208ENST00000504047 KRTAP13-4Q3LI77 160 aa1.16□□□□□ -2.22
ATXN3-208ENST00000504047 LINC01554Q52M75 96 aa1.16□□□□□ -2.22
ATXN3-208ENST00000504047 C9orf116Q5BN46 136 aaPredicted RBP1.16□□□□□ -2.22
ATXN3-208ENST00000504047 CASC2Q6XLA1 102 aa1.16□□□□□ -2.22
ATXN3-208ENST00000504047 KCNQ1DNQ9H478 68 aa1.16□□□□□ -2.22
ATXN3-208ENST00000504047 PLAC8Q9NZF1 115 aa1.16□□□□□ -2.22
ATXN3-208ENST00000504047 LAMA2P24043 3122 aaKnown RBP1.16□□□□□ -2.22
ATXN3-208ENST00000504047 PLCE1Q9P212 2302 aa1.16□□□□□ -2.22
ATXN3-208ENST00000504047 CFAP47Q6ZTR5 3102 aa1.15□□□□□ -2.22
ATXN3-208ENST00000504047 ICE1Q9Y2F5 2266 aa1.15□□□□□ -2.22
ATXN3-208ENST00000504047 FAM186AA6NE01 2351 aa1.15□□□□□ -2.22
ATXN3-208ENST00000504047 ZZEF1O43149 2961 aa1.15□□□□□ -2.22
ATXN3-208ENST00000504047 TRANK1O15050 2925 aa1.15□□□□□ -2.23
ATXN3-208ENST00000504047 TRGV4A0A0C4DH28 118 aa1.15□□□□□ -2.23
ATXN3-208ENST00000504047 LINC00959A0A1B0GUT2 108 aa1.15□□□□□ -2.23
ATXN3-208ENST00000504047 PRB1P04280 392 aa1.15□□□□□ -2.23
ATXN3-208ENST00000504047 PRM2P04554 102 aa1.15□□□□□ -2.23
ATXN3-208ENST00000504047 MP68P56378 58 aa1.15□□□□□ -2.23
ATXN3-208ENST00000504047 LINC00313P59037 77 aa1.15□□□□□ -2.23
ATXN3-208ENST00000504047 COA5Q86WW8 74 aa1.15□□□□□ -2.23
ATXN3-208ENST00000504047 WFDC10AQ9H1F0 79 aa1.15□□□□□ -2.23
ATXN3-208ENST00000504047 CRCT1Q9UGL9 99 aa1.15□□□□□ -2.23
ATXN3-208ENST00000504047 LINC01558Q9Y6Z2 57 aa1.15□□□□□ -2.23
ATXN3-208ENST00000504047 SPEGQ15772 3267 aa1.15□□□□□ -2.23
ATXN3-208ENST00000504047 NBEAQ8NFP9 2946 aa1.15□□□□□ -2.23
ATXN3-208ENST00000504047 PTPRQQ9UMZ3 2332 aa1.15□□□□□ -2.23
ATXN3-208ENST00000504047 DCHS1Q96JQ0 3298 aa1.14□□□□□ -2.23
ATXN3-208ENST00000504047 WDFY3Q8IZQ1 3526 aa1.14□□□□□ -2.23
ATXN3-208ENST00000504047 FREM2Q5SZK8 3169 aa1.14□□□□□ -2.23
ATXN3-208ENST00000504047 WDFY4Q6ZS81 3184 aa1.14□□□□□ -2.23
ATXN3-208ENST00000504047 LAMA1P25391 3075 aa1.14□□□□□ -2.23
ATXN3-208ENST00000504047 IGLV5-48A0A075B6I7 105 aa1.14□□□□□ -2.23
ATXN3-208ENST00000504047 GVQW2A0A096LPI5 108 aaPredicted RBP1.14□□□□□ -2.23
ATXN3-208ENST00000504047 TRGV1A0A0A0MS02 117 aa1.14□□□□□ -2.23
ATXN3-208ENST00000504047 IGKV3OR2-268A0A0C4DH90 116 aa1.14□□□□□ -2.23
ATXN3-208ENST00000504047 K7EQZ3 153 aa1.14□□□□□ -2.23
ATXN3-208ENST00000504047 HTN1P15515 57 aa1.14□□□□□ -2.23
ATXN3-208ENST00000504047 DEFB131AP59861 70 aa1.14□□□□□ -2.23
ATXN3-208ENST00000504047 CNBPP62633 177 aaKnown RBP1.14□□□□□ -2.23
ATXN3-208ENST00000504047 KRTAP25-1Q3LHN0 102 aa1.14□□□□□ -2.23
ATXN3-208ENST00000504047 C9orf163Q8N9P6 203 aa1.14□□□□□ -2.23
ATXN3-208ENST00000504047 URB1O60287 2271 aaKnown RBP1.14□□□□□ -2.23
ATXN3-208ENST00000504047 ABCA4P78363 2273 aa1.14□□□□□ -2.23
ATXN3-208ENST00000504047 AHCTF1Q8WYP5 2266 aa1.14□□□□□ -2.23
ATXN3-208ENST00000504047 REV3LO60673 3130 aa1.13□□□□□ -2.23
ATXN3-208ENST00000504047 CDH23Q9H251 3354 aa1.13□□□□□ -2.23
ATXN3-208ENST00000504047 PRUNE2Q8WUY3 3088 aa1.13□□□□□ -2.23
ATXN3-208ENST00000504047 SPTBN5Q9NRC6 3674 aaKnown RBP1.13□□□□□ -2.23
ATXN3-208ENST00000504047 H0Y9P7 68 aa1.13□□□□□ -2.23
ATXN3-208ENST00000504047 SPAG11BQ08648 103 aa1.13□□□□□ -2.23
ATXN3-208ENST00000504047 FBXL19-AS1Q494R0 122 aa1.13□□□□□ -2.23
ATXN3-208ENST00000504047 SPRR4Q96PI1 79 aa1.13□□□□□ -2.23
ATXN3-208ENST00000504047 FRYQ5TBA9 3013 aa1.13□□□□□ -2.23
ATXN3-208ENST00000504047 DOPEY2Q9Y3R5 2298 aa1.13□□□□□ -2.23
ATXN3-208ENST00000504047 WNK2Q9Y3S1 2297 aa1.13□□□□□ -2.23
ATXN3-208ENST00000504047 FRYLO94915 3013 aa1.13□□□□□ -2.23
ATXN3-208ENST00000504047 TRIOO75962 3097 aa1.12□□□□□ -2.23
ATXN3-208ENST00000504047 A0A1W2PNM2 257 aa1.12□□□□□ -2.23
ATXN3-208ENST00000504047 H3BUX3 64 aa1.12□□□□□ -2.23
ATXN3-208ENST00000504047 SPINK7P58062 85 aa1.12□□□□□ -2.23
ATXN3-208ENST00000504047 DEFB109BQ30KR1 87 aa1.12□□□□□ -2.23
ATXN3-208ENST00000504047 RETNLBQ9BQ08 111 aa1.12□□□□□ -2.23
ATXN3-208ENST00000504047 MYO15AQ9UKN7 3530 aa1.12□□□□□ -2.23
ATXN3-208ENST00000504047 SPTBN2O15020 2390 aa1.12□□□□□ -2.23
ATXN3-208ENST00000504047 PKDREJQ9NTG1 2253 aa1.12□□□□□ -2.23
ATXN3-208ENST00000504047 TNRC18O15417 2968 aaPredicted RBP1.11□□□□□ -2.23
ATXN3-208ENST00000504047 MED13LQ71F56 2210 aa1.11□□□□□ -2.23
ATXN3-208ENST00000504047 IGLV1-51P01701 117 aa1.11□□□□□ -2.23
ATXN3-208ENST00000504047 DEFB112Q30KQ8 113 aa1.11□□□□□ -2.23
ATXN3-208ENST00000504047 C1orf137Q5JT78 98 aa1.11□□□□□ -2.23
ATXN3-208ENST00000504047 CLPSL2Q6UWE3 100 aa1.11□□□□□ -2.23
ATXN3-208ENST00000504047 UNQ6190/PRO20217Q6UXQ8 127 aa1.11□□□□□ -2.23
ATXN3-208ENST00000504047 Q8NAQ8 132 aa1.11□□□□□ -2.23
ATXN3-208ENST00000504047 NOP10Q9NPE3 64 aaKnown RBP1.11□□□□□ -2.23
ATXN3-208ENST00000504047 SPTBN1Q01082 2364 aaKnown RBP1.11□□□□□ -2.23
ATXN3-208ENST00000504047 KALRNO60229 2985 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 CUL9Q8IWT3 2517 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 MGAQ8IWI9 3026 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 DEFB131BA0A096LNP1 70 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 B4DSR2 109 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 K7ERS5 55 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 KRTAP12-1P59990 96 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 SPAG11AQ6PDA7 123 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 SPATA8Q6RVD6 105 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 WFDC10BQ8IUB3 73 aa1.1□□□□□ -2.23
ATXN3-208ENST00000504047 WFDC13Q8IUB5 93 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms