RNA–Protein interactions for RNA: ENST00000503509.1

SERF1A-203, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 2

Gene SERF1A, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-203ENST00000503509 COX6B2Q6YFQ2 88 aa0.33□□□□□ -2.36
SERF1A-203ENST00000503509 RALGAPBQ86X10 1494 aa0.33□□□□□ -2.36
SERF1A-203ENST00000503509 THOC2Q8NI27 1593 aaKnown RBP0.32□□□□□ -2.36
SERF1A-203ENST00000503509 INO80Q9ULG1 1556 aaPredicted RBP0.32□□□□□ -2.36
SERF1A-203ENST00000503509 ABCA12Q86UK0 2595 aa0.32□□□□□ -2.36
SERF1A-203ENST00000503509 CSMD3Q7Z407 3707 aa0.32□□□□□ -2.36
SERF1A-203ENST00000503509 RNF17Q9BXT8 1623 aaKnown RBP0.32□□□□□ -2.36
SERF1A-203ENST00000503509 H3BVH4 76 aa0.32□□□□□ -2.36
SERF1A-203ENST00000503509 CDKN2A-AS1Q9UH64 79 aa0.32□□□□□ -2.36
SERF1A-203ENST00000503509 HILPDAQ9Y5L2 63 aa0.32□□□□□ -2.36
SERF1A-203ENST00000503509 NHSQ6T4R5 1651 aa0.32□□□□□ -2.36
SERF1A-203ENST00000503509 LRP1Q07954 4544 aaKnown RBP0.32□□□□□ -2.36
SERF1A-203ENST00000503509 C4AP0C0L4 1744 aa0.32□□□□□ -2.36
SERF1A-203ENST00000503509 C4BP0C0L5 1744 aa0.32□□□□□ -2.36
SERF1A-203ENST00000503509 PLXNC1O60486 1568 aa0.32□□□□□ -2.36
SERF1A-203ENST00000503509 DIP2AQ14689 1571 aa0.32□□□□□ -2.36
SERF1A-203ENST00000503509 CHD9Q3L8U1 2897 aa0.31□□□□□ -2.36
SERF1A-203ENST00000503509 NRAPQ86VF7 1730 aa0.31□□□□□ -2.36
SERF1A-203ENST00000503509 CELSR2Q9HCU4 2923 aa0.31□□□□□ -2.36
SERF1A-203ENST00000503509 ERICH3Q5RHP9 1530 aa0.31□□□□□ -2.36
SERF1A-203ENST00000503509 MAST4O15021 2626 aa0.31□□□□□ -2.36
SERF1A-203ENST00000503509 UBR3Q6ZT12 1888 aa0.31□□□□□ -2.36
SERF1A-203ENST00000503509 NDUFA3O95167 84 aa0.3□□□□□ -2.36
SERF1A-203ENST00000503509 CCDC180Q9P1Z9 1646 aa0.3□□□□□ -2.36
SERF1A-203ENST00000503509 TNXBP22105 4242 aa0.29□□□□□ -2.36
SERF1A-203ENST00000503509 WFDC13Q8IUB5 93 aa0.29□□□□□ -2.36
SERF1A-203ENST00000503509 DDX60LQ5H9U9 1706 aaKnown RBP0.29□□□□□ -2.36
SERF1A-203ENST00000503509 SYNE1Q8NF91 8797 aaKnown RBP0.28□□□□□ -2.36
SERF1A-203ENST00000503509 ATXN8Q156A1 80 aa0.28□□□□□ -2.36
SERF1A-203ENST00000503509 DEPDC5O75140 1603 aa0.27□□□□□ -2.37
SERF1A-203ENST00000503509 LOC730098B7Z3J9 87 aa0.27□□□□□ -2.37
SERF1A-203ENST00000503509 PRM1P04553 51 aa0.27□□□□□ -2.37
SERF1A-203ENST00000503509 ENHOQ6UWT2 76 aa0.27□□□□□ -2.37
SERF1A-203ENST00000503509 KCNQ1DNQ9H478 68 aa0.27□□□□□ -2.37
SERF1A-203ENST00000503509 CACNA1EQ15878 2313 aa0.27□□□□□ -2.37
SERF1A-203ENST00000503509 TPRP12270 2363 aaKnown RBP0.27□□□□□ -2.37
SERF1A-203ENST00000503509 SMIM31A0A1B0GVY4 71 aa0.26□□□□□ -2.37
SERF1A-203ENST00000503509 UBL5Q9BZL1 73 aa0.26□□□□□ -2.37
SERF1A-203ENST00000503509 PRO3102Q9H379 93 aa0.26□□□□□ -2.37
SERF1A-203ENST00000503509 GNG13Q9P2W3 67 aa0.26□□□□□ -2.37
SERF1A-203ENST00000503509 TIAM1Q13009 1591 aa0.26□□□□□ -2.37
SERF1A-203ENST00000503509 C3P01024 1663 aa0.26□□□□□ -2.37
SERF1A-203ENST00000503509 TNCP24821 2201 aa0.26□□□□□ -2.37
SERF1A-203ENST00000503509 ZNF292O60281 2723 aa0.26□□□□□ -2.37
SERF1A-203ENST00000503509 TENM4Q6N022 2769 aa0.26□□□□□ -2.37
SERF1A-203ENST00000503509 HUWE1Q7Z6Z7 4374 aaKnown RBP0.26□□□□□ -2.37
SERF1A-203ENST00000503509 DEFB131BA0A096LNP1 70 aa0.25□□□□□ -2.37
SERF1A-203ENST00000503509 H0YAA0 97 aa0.25□□□□□ -2.37
SERF1A-203ENST00000503509 SPTBN2O15020 2390 aa0.25□□□□□ -2.37
SERF1A-203ENST00000503509 C2CD3Q4AC94 2353 aa0.25□□□□□ -2.37
SERF1A-203ENST00000503509 MYCBP2O75592 4640 aa0.25□□□□□ -2.37
SERF1A-203ENST00000503509 ABCA6Q8N139 1617 aa0.24□□□□□ -2.37
SERF1A-203ENST00000503509 ABCC6O95255 1503 aa0.24□□□□□ -2.37
SERF1A-203ENST00000503509 MRPL33O75394 65 aaKnown RBP0.24□□□□□ -2.37
SERF1A-203ENST00000503509 C3orf79P0CE67 100 aa0.24□□□□□ -2.37
SERF1A-203ENST00000503509 LINC00158P58513 81 aa0.24□□□□□ -2.37
SERF1A-203ENST00000503509 OTOGQ6ZRI0 2925 aa0.24□□□□□ -2.37
SERF1A-203ENST00000503509 FAT4Q6V0I7 4981 aa0.23□□□□□ -2.37
SERF1A-203ENST00000503509 LPAP08519 4548 aa0.23□□□□□ -2.37
SERF1A-203ENST00000503509 A0A087WWC5 75 aa0.23□□□□□ -2.37
SERF1A-203ENST00000503509 M0R2T5 61 aa0.23□□□□□ -2.37
SERF1A-203ENST00000503509 URB1O60287 2271 aaKnown RBP0.23□□□□□ -2.37
SERF1A-203ENST00000503509 AHCTF1Q8WYP5 2266 aa0.23□□□□□ -2.37
SERF1A-203ENST00000503509 USF3Q68DE3 2245 aa0.23□□□□□ -2.37
SERF1A-203ENST00000503509 TJP1Q07157 1748 aa0.23□□□□□ -2.37
SERF1A-203ENST00000503509 KIAA0586Q9BVV6 1533 aa0.23□□□□□ -2.37
SERF1A-203ENST00000503509 ZFYVE26Q68DK2 2539 aa0.22□□□□□ -2.37
SERF1A-203ENST00000503509 SPRR2DP22532 72 aa0.22□□□□□ -2.37
SERF1A-203ENST00000503509 DEFB114Q30KQ6 69 aa0.22□□□□□ -2.37
SERF1A-203ENST00000503509 GLI2P10070 1586 aa0.22□□□□□ -2.37
SERF1A-203ENST00000503509 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.21□□□□□ -2.38
SERF1A-203ENST00000503509 ETDCA0A1B0GVM5 59 aa0.21□□□□□ -2.38
SERF1A-203ENST00000503509 LYNX1G3V0Z9 82 aa0.21□□□□□ -2.38
SERF1A-203ENST00000503509 DEFB135Q30KP9 77 aa0.21□□□□□ -2.38
SERF1A-203ENST00000503509 FAT2Q9NYQ8 4349 aa0.21□□□□□ -2.38
SERF1A-203ENST00000503509 GOLGA4Q13439 2230 aaKnown RBP0.21□□□□□ -2.38
SERF1A-203ENST00000503509 PTPRZ1P23471 2315 aaPredicted RBP0.2□□□□□ -2.38
SERF1A-203ENST00000503509 VWFP04275 2813 aa0.2□□□□□ -2.38
SERF1A-203ENST00000503509 PRKDCP78527 4128 aaKnown RBP0.2□□□□□ -2.38
SERF1A-203ENST00000503509 GPR98Q8WXG9 6306 aa0.2□□□□□ -2.38
SERF1A-203ENST00000503509 PTPRQQ9UMZ3 2332 aa0.2□□□□□ -2.38
SERF1A-203ENST00000503509 ABCA10Q8WWZ4 1543 aa0.19□□□□□ -2.38
SERF1A-203ENST00000503509 LINC01549A6NIU2 74 aa0.19□□□□□ -2.38
SERF1A-203ENST00000503509 F8P00451 2351 aa0.19□□□□□ -2.38
SERF1A-203ENST00000503509 ALMS1Q8TCU4 4167 aa0.18□□□□□ -2.38
SERF1A-203ENST00000503509 ITSN2Q9NZM3 1697 aa0.18□□□□□ -2.38
SERF1A-203ENST00000503509 CHD6Q8TD26 2715 aa0.18□□□□□ -2.38
SERF1A-203ENST00000503509 IAPPP10997 89 aa0.18□□□□□ -2.38
SERF1A-203ENST00000503509 UNC79Q9P2D8 2635 aa0.18□□□□□ -2.38
SERF1A-203ENST00000503509 LY75O60449 1722 aa0.18□□□□□ -2.38
SERF1A-203ENST00000503509 CACNA1AO00555 2505 aa0.18□□□□□ -2.38
SERF1A-203ENST00000503509 KMT2AQ03164 3969 aa0.18□□□□□ -2.38
SERF1A-203ENST00000503509 REV3LO60673 3130 aa0.17□□□□□ -2.38
SERF1A-203ENST00000503509 CRIP1P50238 77 aa0.17□□□□□ -2.38
SERF1A-203ENST00000503509 S100ZQ8WXG8 99 aa0.17□□□□□ -2.38
SERF1A-203ENST00000503509 PLCE1Q9P212 2302 aa0.17□□□□□ -2.38
SERF1A-203ENST00000503509 GVINP1Q7Z2Y8 2422 aa0.17□□□□□ -2.38
SERF1A-203ENST00000503509 MAST1Q9Y2H9 1570 aa0.16□□□□□ -2.38
SERF1A-203ENST00000503509 SPTBN1Q01082 2364 aaKnown RBP0.16□□□□□ -2.38
SERF1A-203ENST00000503509 SFTA3P0C7M3 94 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms