RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 KRTAP12-3P60328 96 aa2.57□□□□□ -2
NIPBL-203ENST00000503274 UNQ6190/PRO20217Q6UXQ8 127 aa2.57□□□□□ -2
NIPBL-203ENST00000503274 PHF5AQ7RTV0 110 aaKnown RBP2.57□□□□□ -2
NIPBL-203ENST00000503274 CYSLTR1Q9Y271 337 aa2.57□□□□□ -2
NIPBL-203ENST00000503274 LINC01549A6NIU2 74 aa2.56□□□□□ -2
NIPBL-203ENST00000503274 C9JQL5 133 aa2.56□□□□□ -2
NIPBL-203ENST00000503274 M0QXV9 152 aa2.56□□□□□ -2
NIPBL-203ENST00000503274 HERVK_113P63121 156 aa2.56□□□□□ -2
NIPBL-203ENST00000503274 ADM2Q7Z4H4 148 aa2.56□□□□□ -2
NIPBL-203ENST00000503274 FAM19A5Q7Z5A7 132 aaPredicted RBP2.56□□□□□ -2
NIPBL-203ENST00000503274 Q8N8P6 123 aa2.56□□□□□ -2
NIPBL-203ENST00000503274 NXT2Q9NPJ8 142 aaKnown RBP2.56□□□□□ -2
NIPBL-203ENST00000503274 C6orf48Q9UBA6 75 aa2.56□□□□□ -2
NIPBL-203ENST00000503274 NUPR1O60356 82 aa2.55□□□□□ -2
NIPBL-203ENST00000503274 LGALS3P17931 250 aaKnown RBP2.55□□□□□ -2
NIPBL-203ENST00000503274 C2orf82Q6UX34 121 aa2.55□□□□□ -2
NIPBL-203ENST00000503274 Q8IZM0 81 aa2.55□□□□□ -2
NIPBL-203ENST00000503274 TOMM7Q9P0U1 55 aa2.55□□□□□ -2
NIPBL-203ENST00000503274 F8VRH5 84 aa2.54□□□□□ -2
NIPBL-203ENST00000503274 RPL28P46779 137 aaKnown RBP2.54□□□□□ -2
NIPBL-203ENST00000503274 C6orf99Q4VX62 202 aa2.54□□□□□ -2
NIPBL-203ENST00000503274 ZCCHC13Q8WW36 166 aaKnown RBP2.54□□□□□ -2
NIPBL-203ENST00000503274 SCGB3A1Q96QR1 104 aa2.54□□□□□ -2
NIPBL-203ENST00000503274 AMELXQ99217 191 aa2.54□□□□□ -2
NIPBL-203ENST00000503274 TRAV9-1A0A075B6T8 112 aa2.53□□□□□ -2
NIPBL-203ENST00000503274 IGIPA6NJ69 53 aa2.53□□□□□ -2
NIPBL-203ENST00000503274 S100PP25815 95 aa2.53□□□□□ -2
NIPBL-203ENST00000503274 FAM19A3Q7Z5A8 133 aa2.53□□□□□ -2
NIPBL-203ENST00000503274 LINC00469Q8N7U9 141 aa2.53□□□□□ -2
NIPBL-203ENST00000503274 TOMM6Q96B49 74 aa2.53□□□□□ -2
NIPBL-203ENST00000503274 TP73-AS1Q9UF72 201 aa2.53□□□□□ -2
NIPBL-203ENST00000503274 C22orf24Q9Y442 160 aa2.53□□□□□ -2
NIPBL-203ENST00000503274 LPAP08519 4548 aa2.52□□□□□ -2.01
NIPBL-203ENST00000503274 A0A1B0GVG6 124 aa2.52□□□□□ -2.01
NIPBL-203ENST00000503274 TINCRA0A1B0GVN0 87 aa2.52□□□□□ -2.01
NIPBL-203ENST00000503274 H3BRM9 83 aa2.52□□□□□ -2.01
NIPBL-203ENST00000503274 PSPHP1O15172 72 aa2.52□□□□□ -2.01
NIPBL-203ENST00000503274 BCE1O60756 84 aa2.52□□□□□ -2.01
NIPBL-203ENST00000503274 CRYGAP11844 174 aa2.52□□□□□ -2.01
NIPBL-203ENST00000503274 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
NIPBL-203ENST00000503274 KRTAP6-3Q3LI67 103 aa2.52□□□□□ -2.01
NIPBL-203ENST00000503274 PDZD11Q5EBL8 140 aa2.52□□□□□ -2.01
NIPBL-203ENST00000503274 FA2HQ7L5A8 372 aa2.52□□□□□ -2.01
NIPBL-203ENST00000503274 COX7B2Q8TF08 81 aa2.52□□□□□ -2.01
NIPBL-203ENST00000503274 XAGE1AQ9HD64 81 aa2.52□□□□□ -2.01
NIPBL-203ENST00000503274 SMCO4Q9NRQ5 59 aa2.52□□□□□ -2.01
NIPBL-203ENST00000503274 CDKN2A-AS1Q9UH64 79 aa2.52□□□□□ -2.01
NIPBL-203ENST00000503274 PMVKQ15126 192 aa2.51□□□□□ -2.01
NIPBL-203ENST00000503274 SFTA2Q6UW10 78 aa2.51□□□□□ -2.01
NIPBL-203ENST00000503274 GNB1LQ9BYB4 327 aa2.51□□□□□ -2.01
NIPBL-203ENST00000503274 TMEM218A2RU14 115 aa2.5□□□□□ -2.01
NIPBL-203ENST00000503274 RAB5BP61020 215 aa2.5□□□□□ -2.01
NIPBL-203ENST00000503274 FABP9Q0Z7S8 132 aa2.5□□□□□ -2.01
NIPBL-203ENST00000503274 CLLU1Q5K131 121 aa2.5□□□□□ -2.01
NIPBL-203ENST00000503274 CST9LQ9H4G1 147 aa2.5□□□□□ -2.01
NIPBL-203ENST00000503274 IGKV2D-26A0A0A0MRZ7 120 aa2.49□□□□□ -2.01
NIPBL-203ENST00000503274 SPINK8P0C7L1 97 aa2.49□□□□□ -2.01
NIPBL-203ENST00000503274 HRES1P13985 223 aa2.49□□□□□ -2.01
NIPBL-203ENST00000503274 NDUFA6P56556 154 aa2.49□□□□□ -2.01
NIPBL-203ENST00000503274 CTAG1AP78358 180 aa2.49□□□□□ -2.01
NIPBL-203ENST00000503274 COX17Q14061 63 aa2.49□□□□□ -2.01
NIPBL-203ENST00000503274 FAM229BQ4G0N7 80 aa2.49□□□□□ -2.01
NIPBL-203ENST00000503274 SEC11CQ9BY50 192 aa2.49□□□□□ -2.01
NIPBL-203ENST00000503274 MUC2Q02817 5179 aa2.49□□□□□ -2.01
NIPBL-203ENST00000503274 LINC01546A6NGU7 62 aa2.48□□□□□ -2.01
NIPBL-203ENST00000503274 ADCYAP1P18509 176 aa2.48□□□□□ -2.01
NIPBL-203ENST00000503274 S100A12P80511 92 aa2.48□□□□□ -2.01
NIPBL-203ENST00000503274 RHEBQ15382 184 aa2.48□□□□□ -2.01
NIPBL-203ENST00000503274 LINC00587B1AMM8 73 aa2.47□□□□□ -2.01
NIPBL-203ENST00000503274 HBDP02042 147 aa2.47□□□□□ -2.01
NIPBL-203ENST00000503274 LINC00614P0C842 121 aa2.47□□□□□ -2.01
NIPBL-203ENST00000503274 IGLC3P0DOY3 106 aa2.47□□□□□ -2.01
NIPBL-203ENST00000503274 TMEM170BQ5T4T1 132 aa2.47□□□□□ -2.01
NIPBL-203ENST00000503274 FAM19A1Q7Z5A9 133 aa2.47□□□□□ -2.01
NIPBL-203ENST00000503274 BAGE3Q86Y29 109 aa2.47□□□□□ -2.01
NIPBL-203ENST00000503274 SND1-IT1Q9HBX3 110 aa2.47□□□□□ -2.01
NIPBL-203ENST00000503274 ERG28Q9UKR5 140 aa2.47□□□□□ -2.01
NIPBL-203ENST00000503274 TRAPPC1Q9Y5R8 145 aa2.47□□□□□ -2.01
NIPBL-203ENST00000503274 LINC00158P58513 81 aa2.46□□□□□ -2.02
NIPBL-203ENST00000503274 NDUFA5Q16718 116 aa2.46□□□□□ -2.02
NIPBL-203ENST00000503274 SPAG11AQ6PDA7 123 aa2.46□□□□□ -2.02
NIPBL-203ENST00000503274 TMEM126AQ9H061 195 aa2.46□□□□□ -2.02
NIPBL-203ENST00000503274 ZNF706Q9Y5V0 76 aaPredicted RBP2.46□□□□□ -2.02
NIPBL-203ENST00000503274 R4GN34 69 aa2.46□□□□□ -2.02
NIPBL-203ENST00000503274 M0R378 163 aa2.45□□□□□ -2.02
NIPBL-203ENST00000503274 ZNF22P17026 224 aaPredicted RBP2.45□□□□□ -2.02
NIPBL-203ENST00000503274 COMMD7Q86VX2 200 aa2.45□□□□□ -2.02
NIPBL-203ENST00000503274 C18orf32Q8TCD1 76 aa2.45□□□□□ -2.02
NIPBL-203ENST00000503274 PLEKHB2Q96CS7 222 aa2.45□□□□□ -2.02
NIPBL-203ENST00000503274 ZNF625Q96I27 306 aaPredicted RBP2.45□□□□□ -2.02
NIPBL-203ENST00000503274 HIGD2AQ9BW72 106 aa2.45□□□□□ -2.02
NIPBL-203ENST00000503274 MAP1LC3CQ9BXW4 147 aa2.45□□□□□ -2.02
NIPBL-203ENST00000503274 CHTOPQ9Y3Y2 248 aaKnown RBP2.45□□□□□ -2.02
NIPBL-203ENST00000503274 TRAV12-1A0A0B4J245 112 aa2.44□□□□□ -2.02
NIPBL-203ENST00000503274 C11orf86A6NJI1 115 aa2.44□□□□□ -2.02
NIPBL-203ENST00000503274 TMEM238C9JI98 176 aa2.44□□□□□ -2.02
NIPBL-203ENST00000503274 PRLHP81277 87 aa2.44□□□□□ -2.02
NIPBL-203ENST00000503274 MEIG1Q5JSS6 88 aa2.44□□□□□ -2.02
NIPBL-203ENST00000503274 C10orf91Q5T1B1 145 aa2.44□□□□□ -2.02
NIPBL-203ENST00000503274 SVBPQ8N300 66 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms