RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 PRB3Q04118 309 aaPredicted RBP2.12□□□□□ -2.07
RFC1-205ENST00000502991 KRTAP13-4Q3LI77 160 aa2.12□□□□□ -2.07
RFC1-205ENST00000502991 SPTSSBQ8NFR3 76 aa2.12□□□□□ -2.07
RFC1-205ENST00000502991 FAM103A1Q9BTL3 118 aaKnown RBP2.12□□□□□ -2.07
RFC1-205ENST00000502991 WFDC10AQ9H1F0 79 aa2.12□□□□□ -2.07
RFC1-205ENST00000502991 MRPL35Q9NZE8 188 aaKnown RBP2.12□□□□□ -2.07
RFC1-205ENST00000502991 RABAC1Q9UI14 185 aa2.12□□□□□ -2.07
RFC1-205ENST00000502991 USP9YO00507 2555 aaPredicted RBP2.12□□□□□ -2.07
RFC1-205ENST00000502991 ABCA1O95477 2261 aa2.12□□□□□ -2.07
RFC1-205ENST00000502991 ANKRD17O75179 2603 aaKnown RBP2.12□□□□□ -2.07
RFC1-205ENST00000502991 MAP1AP78559 2803 aaPredicted RBP2.12□□□□□ -2.07
RFC1-205ENST00000502991 CR1P17927 2039 aa2.12□□□□□ -2.07
RFC1-205ENST00000502991 CHD6Q8TD26 2715 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 TEX15Q9BXT5 2789 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 CELSR1Q9NYQ6 3014 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 TRAV12-3A0A0B4J271 114 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 RBAKDNA6NC62 111 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 G3V318 75 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 NDUFA4O00483 81 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 DNAL4O96015 105 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 CCKP06307 115 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 APELAP0DMC3 54 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 IGLC2P0DOY2 106 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 DEFB112Q30KQ8 113 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 LINC00322Q6ZN03 302 aaPredicted RBP2.11□□□□□ -2.07
RFC1-205ENST00000502991 SNURFQ9Y675 71 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 NAV3Q8IVL0 2385 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 FBN2P35556 2912 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 VPS13CQ709C8 3753 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 LRRK2Q5S007 2527 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 ZFYVE26Q68DK2 2539 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 CENPEQ02224 2701 aa2.11□□□□□ -2.07
RFC1-205ENST00000502991 PDZD2O15018 2839 aa2.1□□□□□ -2.07
RFC1-205ENST00000502991 ABCA2Q9BZC7 2435 aa2.1□□□□□ -2.07
RFC1-205ENST00000502991 CSPG4Q6UVK1 2322 aa2.1□□□□□ -2.07
RFC1-205ENST00000502991 ADIRFQ15847 76 aa2.1□□□□□ -2.07
RFC1-205ENST00000502991 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
RFC1-205ENST00000502991 BAGE2Q86Y30 109 aa2.1□□□□□ -2.07
RFC1-205ENST00000502991 MYOZ3Q8TDC0 251 aa2.1□□□□□ -2.07
RFC1-205ENST00000502991 ZNF625Q96I27 306 aaPredicted RBP2.1□□□□□ -2.07
RFC1-205ENST00000502991 LENEPQ9Y5L5 61 aa2.1□□□□□ -2.07
RFC1-205ENST00000502991 MXRA5Q9NR99 2828 aa2.1□□□□□ -2.07
RFC1-205ENST00000502991 DOPEY2Q9Y3R5 2298 aa2.1□□□□□ -2.07
RFC1-205ENST00000502991 TENM4Q6N022 2769 aa2.1□□□□□ -2.07
RFC1-205ENST00000502991 PTPN13Q12923 2485 aa2.09□□□□□ -2.07
RFC1-205ENST00000502991 CSMD2Q7Z408 3487 aa2.09□□□□□ -2.07
RFC1-205ENST00000502991 TRAV23DV6A0A075B6W5 121 aa2.09□□□□□ -2.07
RFC1-205ENST00000502991 TRAV13-2A0A0B4J235 113 aa2.09□□□□□ -2.07
RFC1-205ENST00000502991 CLPSL1A2RUU4 121 aa2.09□□□□□ -2.07
RFC1-205ENST00000502991 HIGD1CA8MV81 97 aa2.09□□□□□ -2.07
RFC1-205ENST00000502991 HCG22E2RYF7 251 aa2.09□□□□□ -2.07
RFC1-205ENST00000502991 SVEP1Q4LDE5 3571 aa2.09□□□□□ -2.07
RFC1-205ENST00000502991 NAV2Q8IVL1 2488 aa2.09□□□□□ -2.08
RFC1-205ENST00000502991 HELZ2Q9BYK8 2649 aaKnown RBP2.08□□□□□ -2.08
RFC1-205ENST00000502991 SMIM27A0A1W2PRY6 76 aa2.08□□□□□ -2.08
RFC1-205ENST00000502991 SPATA45Q537H7 98 aa2.08□□□□□ -2.08
RFC1-205ENST00000502991 V9GYV3 84 aa2.08□□□□□ -2.08
RFC1-205ENST00000502991 ITPR2Q14571 2701 aa2.08□□□□□ -2.08
RFC1-205ENST00000502991 ZANQ9Y493 2812 aa2.08□□□□□ -2.08
RFC1-205ENST00000502991 CSMD1Q96PZ7 3565 aa2.08□□□□□ -2.08
RFC1-205ENST00000502991 ZFHX3Q15911 3703 aa2.07□□□□□ -2.08
RFC1-205ENST00000502991 F2Z2F3 143 aa2.07□□□□□ -2.08
RFC1-205ENST00000502991 MT-ATP8P03928 68 aa2.07□□□□□ -2.08
RFC1-205ENST00000502991 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.07□□□□□ -2.08
RFC1-205ENST00000502991 RHPN1-AS1Q9BWJ2 59 aa2.07□□□□□ -2.08
RFC1-205ENST00000502991 CYP4F30PQ9H0H9 118 aa2.07□□□□□ -2.08
RFC1-205ENST00000502991 ITPR3Q14573 2671 aa2.07□□□□□ -2.08
RFC1-205ENST00000502991 ABCA12Q86UK0 2595 aa2.06□□□□□ -2.08
RFC1-205ENST00000502991 A0A1B0GUT8 65 aa2.06□□□□□ -2.08
RFC1-205ENST00000502991 M0R3E3 92 aa2.06□□□□□ -2.08
RFC1-205ENST00000502991 CRIP1P50238 77 aa2.06□□□□□ -2.08
RFC1-205ENST00000502991 Q0VG73 95 aa2.06□□□□□ -2.08
RFC1-205ENST00000502991 GDF5OSQ5U4N7 250 aa2.06□□□□□ -2.08
RFC1-205ENST00000502991 Q86TA4 180 aa2.06□□□□□ -2.08
RFC1-205ENST00000502991 CNFNQ9BYD5 112 aa2.06□□□□□ -2.08
RFC1-205ENST00000502991 POLQO75417 2590 aa2.06□□□□□ -2.08
RFC1-205ENST00000502991 CREBBPQ92793 2442 aa2.06□□□□□ -2.08
RFC1-205ENST00000502991 TRAV21A0A0B4J279 112 aa2.05□□□□□ -2.08
RFC1-205ENST00000502991 TEX49A0A1B0GTD5 131 aa2.05□□□□□ -2.08
RFC1-205ENST00000502991 UBE2D1P51668 147 aa2.05□□□□□ -2.08
RFC1-205ENST00000502991 PCOTHQ58A44 107 aa2.05□□□□□ -2.08
RFC1-205ENST00000502991 UNQ6190/PRO20217Q6UXQ8 127 aa2.05□□□□□ -2.08
RFC1-205ENST00000502991 VAMP8Q9BV40 100 aa2.05□□□□□ -2.08
RFC1-205ENST00000502991 CYSTM1Q9H1C7 97 aa2.05□□□□□ -2.08
RFC1-205ENST00000502991 LINC00474Q9P2X8 69 aa2.05□□□□□ -2.08
RFC1-205ENST00000502991 UNC79Q9P2D8 2635 aa2.05□□□□□ -2.08
RFC1-205ENST00000502991 GCN1Q92616 2671 aaKnown RBP2.05□□□□□ -2.08
RFC1-205ENST00000502991 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
RFC1-205ENST00000502991 ZNF469Q96JG9 3925 aaPredicted RBP2.05□□□□□ -2.08
RFC1-205ENST00000502991 LOC101927531A0A1B0GV80 90 aa2.04□□□□□ -2.08
RFC1-205ENST00000502991 A8MTW9 85 aa2.04□□□□□ -2.08
RFC1-205ENST00000502991 PPP1R17O96001 155 aa2.04□□□□□ -2.08
RFC1-205ENST00000502991 RPL37AP61513 92 aaKnown RBP2.04□□□□□ -2.08
RFC1-205ENST00000502991 DEFB114Q30KQ6 69 aa2.04□□□□□ -2.08
RFC1-205ENST00000502991 TDRG1Q3Y452 100 aa2.04□□□□□ -2.08
RFC1-205ENST00000502991 C10orf99Q6UWK7 81 aa2.04□□□□□ -2.08
RFC1-205ENST00000502991 NF1P21359 2839 aa2.04□□□□□ -2.08
RFC1-205ENST00000502991 FLNAP21333 2647 aaKnown RBP2.04□□□□□ -2.08
RFC1-205ENST00000502991 NBPF19A0A087WUL8 3843 aa2.03□□□□□ -2.08
RFC1-205ENST00000502991 IGKV2-40A0A087WW87 121 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms