RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 C1orf43Q9BWL3 253 aa3.52□□□□□ -1.85
HTT-202ENST00000502820 SND1-IT1Q9HBX3 110 aa3.52□□□□□ -1.85
HTT-202ENST00000502820 LINC00588Q9Y4M8 146 aa3.52□□□□□ -1.85
HTT-202ENST00000502820 DNAH10OSP0CZ25 163 aa3.51□□□□□ -1.85
HTT-202ENST00000502820 LINC00242Q5T6M2 205 aa3.51□□□□□ -1.85
HTT-202ENST00000502820 C14orf132Q9NPU4 83 aa3.51□□□□□ -1.85
HTT-202ENST00000502820 RNF213Q63HN8 5207 aa3.5□□□□□ -1.85
HTT-202ENST00000502820 TRBV7-6A0A0J9YX20 115 aa3.5□□□□□ -1.85
HTT-202ENST00000502820 KRTAP9-6A0A140TA67 174 aa3.5□□□□□ -1.85
HTT-202ENST00000502820 PLAC8L1A1L4L8 177 aa3.5□□□□□ -1.85
HTT-202ENST00000502820 OXTP01178 125 aa3.5□□□□□ -1.85
HTT-202ENST00000502820 RPL36AP83881 106 aaKnown RBP3.5□□□□□ -1.85
HTT-202ENST00000502820 COX17Q14061 63 aa3.5□□□□□ -1.85
HTT-202ENST00000502820 SPINK13Q1W4C9 94 aa3.5□□□□□ -1.85
HTT-202ENST00000502820 C1orf195Q5TG92 126 aa3.5□□□□□ -1.85
HTT-202ENST00000502820 C20orf197Q8N268 126 aa3.5□□□□□ -1.85
HTT-202ENST00000502820 SMIM11BQ8TCY0 68 aa3.5□□□□□ -1.85
HTT-202ENST00000502820 RPL36ALQ969Q0 106 aaKnown RBP3.5□□□□□ -1.85
HTT-202ENST00000502820 FAM218AQ96MZ4 157 aa3.5□□□□□ -1.85
HTT-202ENST00000502820 KRTAP9-2Q9BYQ4 174 aa3.5□□□□□ -1.85
HTT-202ENST00000502820 KRTAP1-5Q9BYS1 174 aa3.5□□□□□ -1.85
HTT-202ENST00000502820 IGKV3D-7A0A0C4DH55 119 aa3.49□□□□□ -1.85
HTT-202ENST00000502820 A0A1B0GW54 56 aa3.49□□□□□ -1.85
HTT-202ENST00000502820 TRBV6-4A0A1B0GX49 114 aa3.49□□□□□ -1.85
HTT-202ENST00000502820 ZNF561-AS1K7EIQ3 104 aa3.49□□□□□ -1.85
HTT-202ENST00000502820 K7EQD1 137 aa3.49□□□□□ -1.85
HTT-202ENST00000502820 LECT2O14960 151 aa3.49□□□□□ -1.85
HTT-202ENST00000502820 INSP01308 110 aa3.49□□□□□ -1.85
HTT-202ENST00000502820 PRM2P04554 102 aa3.49□□□□□ -1.85
HTT-202ENST00000502820 SEC61GP60059 68 aa3.49□□□□□ -1.85
HTT-202ENST00000502820 SOSTDC1Q6X4U4 206 aa3.49□□□□□ -1.85
HTT-202ENST00000502820 LINC00528Q8N1L1 170 aa3.49□□□□□ -1.85
HTT-202ENST00000502820 COX7B2Q8TF08 81 aa3.49□□□□□ -1.85
HTT-202ENST00000502820 A0A087WYN8 130 aa3.48□□□□□ -1.85
HTT-202ENST00000502820 A0A087WZ39 114 aa3.48□□□□□ -1.85
HTT-202ENST00000502820 IGLV5-52A0A0A0MRZ9 124 aa3.48□□□□□ -1.85
HTT-202ENST00000502820 LYRM9A8MSI8 78 aa3.48□□□□□ -1.85
HTT-202ENST00000502820 HTN1P15515 57 aa3.48□□□□□ -1.85
HTT-202ENST00000502820 C6orf226Q5I0X4 101 aa3.48□□□□□ -1.85
HTT-202ENST00000502820 PRR15Q8IV56 129 aa3.48□□□□□ -1.85
HTT-202ENST00000502820 MIR7-3HGQ8N6C7 128 aa3.48□□□□□ -1.85
HTT-202ENST00000502820 LINC00337Q8N6G1 96 aa3.48□□□□□ -1.85
HTT-202ENST00000502820 CYSTM1Q9H1C7 97 aa3.48□□□□□ -1.85
HTT-202ENST00000502820 CDC42SE2Q9NRR3 84 aa3.48□□□□□ -1.85
HTT-202ENST00000502820 IGKV2-28A0A075B6P5 120 aa3.47□□□□□ -1.85
HTT-202ENST00000502820 A0A087WVE0 104 aa3.47□□□□□ -1.85
HTT-202ENST00000502820 IGKV2-29A2NJV5 120 aaPredicted RBP3.47□□□□□ -1.85
HTT-202ENST00000502820 UBE2L6O14933 153 aa3.47□□□□□ -1.85
HTT-202ENST00000502820 IGKV2D-28P01615 120 aa3.47□□□□□ -1.85
HTT-202ENST00000502820 RBM3P98179 157 aaKnown RBP3.47□□□□□ -1.85
HTT-202ENST00000502820 LINC00612Q8N6U2 182 aa3.47□□□□□ -1.85
HTT-202ENST00000502820 Q8N814 137 aa3.47□□□□□ -1.85
HTT-202ENST00000502820 C16orf74Q96GX8 76 aa3.47□□□□□ -1.85
HTT-202ENST00000502820 Q9HAA7 133 aa3.47□□□□□ -1.85
HTT-202ENST00000502820 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.46□□□□□ -1.86
HTT-202ENST00000502820 TRAV23DV6A0A075B6W5 121 aa3.46□□□□□ -1.86
HTT-202ENST00000502820 A0A087WTM6 91 aa3.46□□□□□ -1.86
HTT-202ENST00000502820 TRBV7-4A0A0J9YYF1 115 aa3.46□□□□□ -1.86
HTT-202ENST00000502820 ESRGQ1W209 222 aa3.46□□□□□ -1.86
HTT-202ENST00000502820 ENHOQ6UWT2 76 aa3.46□□□□□ -1.86
HTT-202ENST00000502820 Q6ZQT0 140 aa3.46□□□□□ -1.86
HTT-202ENST00000502820 Q6ZRU5 148 aa3.46□□□□□ -1.86
HTT-202ENST00000502820 Q8IZM0 81 aa3.46□□□□□ -1.86
HTT-202ENST00000502820 FAM30AQ9NZY2 134 aa3.46□□□□□ -1.86
HTT-202ENST00000502820 F8WEM9 126 aa3.45□□□□□ -1.86
HTT-202ENST00000502820 NCR3O14931 201 aa3.45□□□□□ -1.86
HTT-202ENST00000502820 PAX4O43316 350 aa3.45□□□□□ -1.86
HTT-202ENST00000502820 PSCAO43653 123 aa3.45□□□□□ -1.86
HTT-202ENST00000502820 LINC00158P58513 81 aa3.45□□□□□ -1.86
HTT-202ENST00000502820 SS18Q15532 418 aa3.45□□□□□ -1.86
HTT-202ENST00000502820 FP248Q71RG6 208 aaPredicted RBP3.45□□□□□ -1.86
HTT-202ENST00000502820 C11orf72Q8NBR9 251 aa3.45□□□□□ -1.86
HTT-202ENST00000502820 NOP10Q9NPE3 64 aaKnown RBP3.45□□□□□ -1.86
HTT-202ENST00000502820 NACAE9PAV3 2078 aa3.44□□□□□ -1.86
HTT-202ENST00000502820 LINC01547P58512 204 aaPredicted RBP3.44□□□□□ -1.86
HTT-202ENST00000502820 COX6A2Q02221 97 aa3.44□□□□□ -1.86
HTT-202ENST00000502820 TMEM254Q8TBM7 123 aa3.44□□□□□ -1.86
HTT-202ENST00000502820 BRK1Q8WUW1 75 aa3.44□□□□□ -1.86
HTT-202ENST00000502820 IGHV3OR16-9A0A0B4J2B5 98 aa3.43□□□□□ -1.86
HTT-202ENST00000502820 A0A0U1RQV1 116 aa3.43□□□□□ -1.86
HTT-202ENST00000502820 H3BNG1 76 aa3.43□□□□□ -1.86
HTT-202ENST00000502820 PRYO14603 147 aa3.43□□□□□ -1.86
HTT-202ENST00000502820 CD164Q04900 197 aa3.43□□□□□ -1.86
HTT-202ENST00000502820 NREPQ16612 68 aa3.43□□□□□ -1.86
HTT-202ENST00000502820 Q1T7F1 81 aa3.43□□□□□ -1.86
HTT-202ENST00000502820 RNASE13Q5GAN3 156 aaKnown RBP3.43□□□□□ -1.86
HTT-202ENST00000502820 LCE2CQ5TA81 110 aa3.43□□□□□ -1.86
HTT-202ENST00000502820 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.43□□□□□ -1.86
HTT-202ENST00000502820 NTM-AS1Q6ZSK4 140 aa3.43□□□□□ -1.86
HTT-202ENST00000502820 Q6ZVQ6 151 aa3.43□□□□□ -1.86
HTT-202ENST00000502820 FAM19A1Q7Z5A9 133 aa3.43□□□□□ -1.86
HTT-202ENST00000502820 VPS13BQ7Z7G8 4022 aa3.43□□□□□ -1.86
HTT-202ENST00000502820 A0A096LPF7 62 aa3.42□□□□□ -1.86
HTT-202ENST00000502820 NDUFB1O75438 58 aa3.42□□□□□ -1.86
HTT-202ENST00000502820 PMAIP1Q13794 54 aa3.42□□□□□ -1.86
HTT-202ENST00000502820 LINC00575Q6W349 94 aa3.42□□□□□ -1.86
HTT-202ENST00000502820 Q6ZRN7 208 aaPredicted RBP3.42□□□□□ -1.86
HTT-202ENST00000502820 Q6ZTI0 123 aa3.42□□□□□ -1.86
HTT-202ENST00000502820 Q8N3U1 123 aa3.42□□□□□ -1.86
HTT-202ENST00000502820 PKIGQ9Y2B9 76 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms