RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 K7EIL1 84 aa10.79□□□□□ -0.68
VCAN-204ENST00000502527 CRYGAP11844 174 aa10.79□□□□□ -0.68
VCAN-204ENST00000502527 UPK3BQ9BT76 320 aa10.79□□□□□ -0.68
VCAN-204ENST00000502527 NOTCH1P46531 2555 aa10.79□□□□□ -0.68
VCAN-204ENST00000502527 LINC01547P58512 204 aaPredicted RBP10.77□□□□□ -0.69
VCAN-204ENST00000502527 CASC10Q5T4H9 136 aa10.77□□□□□ -0.69
VCAN-204ENST00000502527 HAMPP81172 84 aa10.77□□□□□ -0.69
VCAN-204ENST00000502527 BAHCC1Q9P281 2608 aa10.76□□□□□ -0.69
VCAN-204ENST00000502527 IGLV5-37A0A075B6J1 123 aa10.75□□□□□ -0.69
VCAN-204ENST00000502527 CXCL6P80162 114 aa10.75□□□□□ -0.69
VCAN-204ENST00000502527 PRYO14603 147 aa10.72□□□□□ -0.69
VCAN-204ENST00000502527 DHRS4-AS1Q9P1J3 65 aa10.72□□□□□ -0.69
VCAN-204ENST00000502527 COL6A5A8TX70 2615 aa10.71□□□□□ -0.69
VCAN-204ENST00000502527 IGLV1-50A0A075B6I6 118 aa10.71□□□□□ -0.69
VCAN-204ENST00000502527 FAM168BA1KXE4 195 aa10.71□□□□□ -0.69
VCAN-204ENST00000502527 RPL37AP8A6NKH3 93 aa10.7□□□□□ -0.7
VCAN-204ENST00000502527 Q6ZRX8 168 aa10.7□□□□□ -0.7
VCAN-204ENST00000502527 LOC107984640A0A0U1RRK4 108 aa10.7□□□□□ -0.7
VCAN-204ENST00000502527 NBEAL1Q6ZS30 2694 aa10.7□□□□□ -0.7
VCAN-204ENST00000502527 ETDCA0A1B0GVM5 59 aa10.69□□□□□ -0.7
VCAN-204ENST00000502527 KRTAP4-16G5E9R7 235 aaPredicted RBP10.69□□□□□ -0.7
VCAN-204ENST00000502527 BCE1O60756 84 aa10.69□□□□□ -0.7
VCAN-204ENST00000502527 SPRR1AP35321 89 aa10.69□□□□□ -0.7
VCAN-204ENST00000502527 DEFB105AQ8NG35 78 aa10.69□□□□□ -0.7
VCAN-204ENST00000502527 Q8N377 158 aa10.68□□□□□ -0.7
VCAN-204ENST00000502527 SMIM20Q8N5G0 67 aa10.67□□□□□ -0.7
VCAN-204ENST00000502527 HUWE1Q7Z6Z7 4374 aaKnown RBP10.67□□□□□ -0.7
VCAN-204ENST00000502527 KRTAP7-1Q8IUC3 87 aa10.67□□□□□ -0.7
VCAN-204ENST00000502527 MRPL55Q7Z7F7 128 aaKnown RBP10.66□□□□□ -0.7
VCAN-204ENST00000502527 DNAH1Q9P2D7 4330 aa10.66□□□□□ -0.7
VCAN-204ENST00000502527 FAM19A5Q7Z5A7 132 aaPredicted RBP10.65□□□□□ -0.7
VCAN-204ENST00000502527 Q9BRP9 147 aa10.65□□□□□ -0.7
VCAN-204ENST00000502527 IGLV5-48A0A075B6I7 105 aa10.64□□□□□ -0.71
VCAN-204ENST00000502527 CYSTM1Q9H1C7 97 aa10.64□□□□□ -0.71
VCAN-204ENST00000502527 SCXQ7RTU7 201 aa10.62□□□□□ -0.71
VCAN-204ENST00000502527 TRAV7A0A075B6U4 112 aa10.61□□□□□ -0.71
VCAN-204ENST00000502527 NREPQ16612 68 aa10.61□□□□□ -0.71
VCAN-204ENST00000502527 TMEM258P61165 79 aa10.61□□□□□ -0.71
VCAN-204ENST00000502527 A0A1B0GW54 56 aa10.59□□□□□ -0.71
VCAN-204ENST00000502527 REG3GQ6UW15 175 aa10.58□□□□□ -0.72
VCAN-204ENST00000502527 KRTAP1-5Q9BYS1 174 aa10.58□□□□□ -0.72
VCAN-204ENST00000502527 FUSP35637 526 aaKnown RBP eCLIP10.57□□□□□ -0.72
VCAN-204ENST00000502527 CNBPP62633 177 aaKnown RBP10.57□□□□□ -0.72
VCAN-204ENST00000502527 UBE2BP63146 152 aa10.57□□□□□ -0.72
VCAN-204ENST00000502527 UBE2DNLQ8IWF7 75 aa10.57□□□□□ -0.72
VCAN-204ENST00000502527 ST20-AS1Q8NBB2 130 aa10.57□□□□□ -0.72
VCAN-204ENST00000502527 PSCAO43653 123 aa10.57□□□□□ -0.72
VCAN-204ENST00000502527 C16orf90A8MZG2 172 aa10.56□□□□□ -0.72
VCAN-204ENST00000502527 C3orf84H3BNL1 204 aa10.56□□□□□ -0.72
VCAN-204ENST00000502527 TNP2Q05952 138 aa10.56□□□□□ -0.72
VCAN-204ENST00000502527 MGAM2Q2M2H8 2515 aa10.56□□□□□ -0.72
VCAN-204ENST00000502527 ERC2-IT1O76042 136 aa10.55□□□□□ -0.72
VCAN-204ENST00000502527 C20orf197Q8N268 126 aa10.55□□□□□ -0.72
VCAN-204ENST00000502527 APLNQ9ULZ1 77 aa10.55□□□□□ -0.72
VCAN-204ENST00000502527 C1orf137Q5JT78 98 aa10.54□□□□□ -0.72
VCAN-204ENST00000502527 A0A096LNI7 61 aa10.54□□□□□ -0.72
VCAN-204ENST00000502527 BPY2O14599 106 aa10.54□□□□□ -0.72
VCAN-204ENST00000502527 J3KT08 172 aa10.53□□□□□ -0.72
VCAN-204ENST00000502527 A0A1W2PNM2 257 aa10.53□□□□□ -0.72
VCAN-204ENST00000502527 C14orf177Q52M58 125 aa10.53□□□□□ -0.72
VCAN-204ENST00000502527 IGKV2-24A0A0C4DH68 120 aa10.52□□□□□ -0.73
VCAN-204ENST00000502527 RPS28P62857 69 aaKnown RBP10.52□□□□□ -0.73
VCAN-204ENST00000502527 IGKV4-1P06312 121 aa10.51□□□□□ -0.73
VCAN-204ENST00000502527 Q8NBF4 154 aa10.51□□□□□ -0.73
VCAN-204ENST00000502527 STAB2Q8WWQ8 2551 aa10.5□□□□□ -0.73
VCAN-204ENST00000502527 A0A1W2PNN7 141 aa10.49□□□□□ -0.73
VCAN-204ENST00000502527 Q8N9L7 120 aa10.49□□□□□ -0.73
VCAN-204ENST00000502527 B9D2Q9BPU9 175 aa10.49□□□□□ -0.73
VCAN-204ENST00000502527 DPH3Q96FX2 82 aa10.48□□□□□ -0.73
VCAN-204ENST00000502527 SPRR4Q96PI1 79 aa10.48□□□□□ -0.73
VCAN-204ENST00000502527 KLKP1Q107X0 134 aa10.47□□□□□ -0.73
VCAN-204ENST00000502527 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.46□□□□□ -0.73
VCAN-204ENST00000502527 F8WEM9 126 aa10.46□□□□□ -0.73
VCAN-204ENST00000502527 SMIM29Q86T20 159 aa10.46□□□□□ -0.73
VCAN-204ENST00000502527 COL7A1Q02388 2944 aa10.44□□□□□ -0.74
VCAN-204ENST00000502527 DNAH9Q9NYC9 4486 aa10.44□□□□□ -0.74
VCAN-204ENST00000502527 PRLHP81277 87 aa10.43□□□□□ -0.74
VCAN-204ENST00000502527 H7BZZ5 65 aa10.42□□□□□ -0.74
VCAN-204ENST00000502527 LINC00476Q8WZB0 136 aa10.42□□□□□ -0.74
VCAN-204ENST00000502527 PKIGQ9Y2B9 76 aa10.42□□□□□ -0.74
VCAN-204ENST00000502527 DNAH10Q8IVF4 4471 aa10.41□□□□□ -0.74
VCAN-204ENST00000502527 MDFIQ99750 246 aa10.41□□□□□ -0.74
VCAN-204ENST00000502527 HIGD2AQ9BW72 106 aa10.41□□□□□ -0.74
VCAN-204ENST00000502527 SNURFQ9Y675 71 aa10.41□□□□□ -0.74
VCAN-204ENST00000502527 DYNC2H1Q8NCM8 4307 aaKnown RBP10.4□□□□□ -0.74
VCAN-204ENST00000502527 C9orf163Q8N9P6 203 aa10.4□□□□□ -0.74
VCAN-204ENST00000502527 NBDYA0A0U1RRE5 68 aa10.4□□□□□ -0.75
VCAN-204ENST00000502527 NUPR2A6NF83 97 aa10.4□□□□□ -0.75
VCAN-204ENST00000502527 CHTF8P0CG12 524 aa10.4□□□□□ -0.75
VCAN-204ENST00000502527 FAM236DA0A1B0GTK5 79 aa10.39□□□□□ -0.75
VCAN-204ENST00000502527 LRCOL1A6NCL2 159 aa10.39□□□□□ -0.75
VCAN-204ENST00000502527 FAM236CP0DP71 79 aa10.39□□□□□ -0.75
VCAN-204ENST00000502527 PHF5AQ7RTV0 110 aaKnown RBP10.38□□□□□ -0.75
VCAN-204ENST00000502527 IGLV8-61A0A075B6I0 122 aa10.38□□□□□ -0.75
VCAN-204ENST00000502527 NDUFC1O43677 76 aa10.38□□□□□ -0.75
VCAN-204ENST00000502527 IGFL1Q6UW32 110 aa10.38□□□□□ -0.75
VCAN-204ENST00000502527 OCR1Q9BZK8 76 aa10.38□□□□□ -0.75
VCAN-204ENST00000502527 H0Y9J4 135 aa10.37□□□□□ -0.75
VCAN-204ENST00000502527 LYSTQ99698 3801 aa10.37□□□□□ -0.75
VCAN-204ENST00000502527 LINC00474Q9P2X8 69 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms