RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 SCGB1D4Q6XE38 83 aa4.41□□□□□ -1.7
USP46-203ENST00000502443 FAM19A1Q7Z5A9 133 aa4.41□□□□□ -1.7
USP46-203ENST00000502443 LITAFQ99732 161 aa4.41□□□□□ -1.7
USP46-203ENST00000502443 FAT3Q8TDW7 4589 aa4.4□□□□□ -1.7
USP46-203ENST00000502443 EIF4EBP3O60516 100 aaPredicted RBP4.4□□□□□ -1.71
USP46-203ENST00000502443 TIMM17BO60830 172 aa4.4□□□□□ -1.71
USP46-203ENST00000502443 PRLHP81277 87 aa4.4□□□□□ -1.71
USP46-203ENST00000502443 COL5A1-AS1Q5SY13 56 aa4.4□□□□□ -1.71
USP46-203ENST00000502443 SOSTDC1Q6X4U4 206 aa4.4□□□□□ -1.71
USP46-203ENST00000502443 CEND1Q8N111 149 aa4.4□□□□□ -1.71
USP46-203ENST00000502443 SPANXB1Q9NS25 103 aaPredicted RBP4.4□□□□□ -1.71
USP46-203ENST00000502443 TRBV10-3A0A0K0K1G6 114 aa4.39□□□□□ -1.71
USP46-203ENST00000502443 TRBV10-2A0A0K0K1G8 114 aa4.39□□□□□ -1.71
USP46-203ENST00000502443 NDUFC2O95298 119 aa4.39□□□□□ -1.71
USP46-203ENST00000502443 KRTAP1-4P0C5Y4 121 aa4.39□□□□□ -1.71
USP46-203ENST00000502443 KRTAP10-8P60410 259 aa4.39□□□□□ -1.71
USP46-203ENST00000502443 S100A7L2Q5SY68 101 aa4.39□□□□□ -1.71
USP46-203ENST00000502443 KRTAP13-1Q8IUC0 172 aa4.39□□□□□ -1.71
USP46-203ENST00000502443 PRR26Q8N8Z3 221 aa4.39□□□□□ -1.71
USP46-203ENST00000502443 LINC00308Q8TCZ7 52 aa4.39□□□□□ -1.71
USP46-203ENST00000502443 HIST1H4GQ99525 98 aa4.39□□□□□ -1.71
USP46-203ENST00000502443 PRYO14603 147 aa4.38□□□□□ -1.71
USP46-203ENST00000502443 TAX1BP3O14907 124 aa4.38□□□□□ -1.71
USP46-203ENST00000502443 Q6ZVH6 145 aa4.38□□□□□ -1.71
USP46-203ENST00000502443 KCNQ1DNQ9H478 68 aa4.38□□□□□ -1.71
USP46-203ENST00000502443 A0A1B0GV90 55 aa4.37□□□□□ -1.71
USP46-203ENST00000502443 A0A1B0GWB2 263 aa4.37□□□□□ -1.71
USP46-203ENST00000502443 LCE2AQ5TA79 106 aaPredicted RBP4.37□□□□□ -1.71
USP46-203ENST00000502443 MUSTN1Q8IVN3 82 aa4.37□□□□□ -1.71
USP46-203ENST00000502443 SPANXDQ9BXN6 97 aa4.37□□□□□ -1.71
USP46-203ENST00000502443 SPANXCQ9NY87 97 aa4.37□□□□□ -1.71
USP46-203ENST00000502443 HERC1Q15751 4861 aa4.36□□□□□ -1.71
USP46-203ENST00000502443 ETDCA0A1B0GVM5 59 aa4.36□□□□□ -1.71
USP46-203ENST00000502443 A6NDN8 102 aa4.36□□□□□ -1.71
USP46-203ENST00000502443 IGLV6-57P01721 117 aa4.36□□□□□ -1.71
USP46-203ENST00000502443 SPRR1AP35321 89 aa4.36□□□□□ -1.71
USP46-203ENST00000502443 LINC00337Q8N6G1 96 aa4.36□□□□□ -1.71
USP46-203ENST00000502443 HIGD2AQ9BW72 106 aa4.36□□□□□ -1.71
USP46-203ENST00000502443 K7ERJ3 54 aa4.35□□□□□ -1.71
USP46-203ENST00000502443 RPL13AP40429 203 aaKnown RBP4.35□□□□□ -1.71
USP46-203ENST00000502443 OR13C6PQ8NH95 151 aa4.35□□□□□ -1.71
USP46-203ENST00000502443 COPS9Q8WXC6 57 aa4.35□□□□□ -1.71
USP46-203ENST00000502443 NHP2Q9NX24 153 aaKnown RBP4.35□□□□□ -1.71
USP46-203ENST00000502443 ANAPC11Q9NYG5 84 aa4.35□□□□□ -1.71
USP46-203ENST00000502443 TRAV23DV6A0A075B6W5 121 aa4.34□□□□□ -1.71
USP46-203ENST00000502443 A0A087X002 238 aa4.34□□□□□ -1.71
USP46-203ENST00000502443 A4D1N5 150 aa4.34□□□□□ -1.71
USP46-203ENST00000502443 KRTAP4-16G5E9R7 235 aaPredicted RBP4.34□□□□□ -1.71
USP46-203ENST00000502443 CFC1BP0CG36 223 aa4.34□□□□□ -1.71
USP46-203ENST00000502443 CFC1P0CG37 223 aa4.34□□□□□ -1.71
USP46-203ENST00000502443 CRYGAP11844 174 aa4.34□□□□□ -1.71
USP46-203ENST00000502443 IFITM1P13164 125 aa4.34□□□□□ -1.71
USP46-203ENST00000502443 LCE2CQ5TA81 110 aa4.34□□□□□ -1.71
USP46-203ENST00000502443 CBY1Q9Y3M2 126 aa4.34□□□□□ -1.71
USP46-203ENST00000502443 TNXBP22105 4242 aa4.33□□□□□ -1.72
USP46-203ENST00000502443 TMEM238LA0A1B0GVL6 79 aa4.33□□□□□ -1.72
USP46-203ENST00000502443 C9orf118A6NHY6 69 aa4.33□□□□□ -1.72
USP46-203ENST00000502443 A6NJY4 79 aa4.33□□□□□ -1.72
USP46-203ENST00000502443 B5MCH6 92 aa4.33□□□□□ -1.72
USP46-203ENST00000502443 ZNF73O43830 326 aaPredicted RBP4.33□□□□□ -1.72
USP46-203ENST00000502443 Q6ZRX8 168 aa4.33□□□□□ -1.72
USP46-203ENST00000502443 SMCR5Q8TEV8 140 aa4.33□□□□□ -1.72
USP46-203ENST00000502443 RAB37Q96AX2 223 aa4.33□□□□□ -1.72
USP46-203ENST00000502443 PPDPFQ9H3Y8 114 aa4.33□□□□□ -1.72
USP46-203ENST00000502443 FAM229BQ4G0N7 80 aa4.32□□□□□ -1.72
USP46-203ENST00000502443 TYMSOSQ8TAI1 123 aa4.32□□□□□ -1.72
USP46-203ENST00000502443 NAA38Q9BRA0 125 aaKnown RBP4.32□□□□□ -1.72
USP46-203ENST00000502443 ZNF706Q9Y5V0 76 aaPredicted RBP4.32□□□□□ -1.72
USP46-203ENST00000502443 A0A0B4J2C4 111 aa4.31□□□□□ -1.72
USP46-203ENST00000502443 H3BUT2 72 aa4.31□□□□□ -1.72
USP46-203ENST00000502443 KRTAP13-2Q52LG2 175 aa4.31□□□□□ -1.72
USP46-203ENST00000502443 SPRR4Q96PI1 79 aa4.31□□□□□ -1.72
USP46-203ENST00000502443 Q9BRP9 147 aa4.31□□□□□ -1.72
USP46-203ENST00000502443 ERC2-IT1O76042 136 aa4.3□□□□□ -1.72
USP46-203ENST00000502443 TSPAN13O95857 204 aa4.3□□□□□ -1.72
USP46-203ENST00000502443 PRO1854Q9UHT4 67 aa4.3□□□□□ -1.72
USP46-203ENST00000502443 TRAV13-2A0A0B4J235 113 aa4.29□□□□□ -1.72
USP46-203ENST00000502443 A0A1W2PPM0 123 aa4.29□□□□□ -1.72
USP46-203ENST00000502443 C6orf99Q4VX62 202 aa4.29□□□□□ -1.72
USP46-203ENST00000502443 GAGE2AQ6NT46 116 aa4.29□□□□□ -1.72
USP46-203ENST00000502443 COX7BP24311 80 aa4.28□□□□□ -1.72
USP46-203ENST00000502443 VAMP3Q15836 100 aa4.28□□□□□ -1.72
USP46-203ENST00000502443 C3orf22Q8N5N4 141 aa4.28□□□□□ -1.72
USP46-203ENST00000502443 ELOF1P60002 83 aaKnown RBP4.27□□□□□ -1.73
USP46-203ENST00000502443 LINC00483Q53H64 154 aa4.27□□□□□ -1.73
USP46-203ENST00000502443 LINC00304Q8N9R0 145 aa4.27□□□□□ -1.73
USP46-203ENST00000502443 DHRS4-AS1Q9P1J3 65 aa4.27□□□□□ -1.73
USP46-203ENST00000502443 IGLV9-49A0A0B4J1Y8 123 aa4.26□□□□□ -1.73
USP46-203ENST00000502443 TRBV7-6A0A0J9YX20 115 aa4.26□□□□□ -1.73
USP46-203ENST00000502443 H7C2G1 150 aa4.26□□□□□ -1.73
USP46-203ENST00000502443 K7EP34 96 aa4.26□□□□□ -1.73
USP46-203ENST00000502443 FABP2P12104 132 aa4.26□□□□□ -1.73
USP46-203ENST00000502443 UBE2V1Q13404 147 aa4.26□□□□□ -1.73
USP46-203ENST00000502443 ST20-AS1Q8NBB2 130 aa4.26□□□□□ -1.73
USP46-203ENST00000502443 SMIM11BQ8TCY0 68 aa4.26□□□□□ -1.73
USP46-203ENST00000502443 SPCS1Q9Y6A9 102 aa4.26□□□□□ -1.73
USP46-203ENST00000502443 TRIAP1O43715 76 aa4.24□□□□□ -1.73
USP46-203ENST00000502443 MOBPQ13875 183 aa4.24□□□□□ -1.73
USP46-203ENST00000502443 Q8NBF4 154 aa4.24□□□□□ -1.73
USP46-203ENST00000502443 TCL1BO95988 128 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms