RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 A8MU10 97 aa8.73□□□□□ -1.01
GAPVD1-220ENST00000497580 CSNK1G2-AS1Q8NCQ2 148 aa8.73□□□□□ -1.01
GAPVD1-220ENST00000497580 A8MUN3 132 aa8.72□□□□□ -1.01
GAPVD1-220ENST00000497580 H3BQ85 93 aa8.72□□□□□ -1.01
GAPVD1-220ENST00000497580 ELOF1P60002 83 aaKnown RBP8.72□□□□□ -1.01
GAPVD1-220ENST00000497580 DEFB135Q30KP9 77 aa8.72□□□□□ -1.01
GAPVD1-220ENST00000497580 C6orf48Q9UBA6 75 aa8.72□□□□□ -1.01
GAPVD1-220ENST00000497580 NOTCH1P46531 2555 aa8.72□□□□□ -1.01
GAPVD1-220ENST00000497580 TRAV22A0A0B4J277 110 aa8.71□□□□□ -1.01
GAPVD1-220ENST00000497580 PRR15Q8IV56 129 aa8.71□□□□□ -1.01
GAPVD1-220ENST00000497580 NBEAL1Q6ZS30 2694 aa8.71□□□□□ -1.02
GAPVD1-220ENST00000497580 SPTSSBQ8NFR3 76 aa8.7□□□□□ -1.02
GAPVD1-220ENST00000497580 CAMK2N2Q96S95 79 aa8.7□□□□□ -1.02
GAPVD1-220ENST00000497580 DEFB116Q30KQ4 102 aa8.7□□□□□ -1.02
GAPVD1-220ENST00000497580 TENM1Q9UKZ4 2725 aa8.69□□□□□ -1.02
GAPVD1-220ENST00000497580 SMR3AQ99954 134 aa8.69□□□□□ -1.02
GAPVD1-220ENST00000497580 A0A0J9YWU9 116 aa8.67□□□□□ -1.02
GAPVD1-220ENST00000497580 IGHV4-30-4P0DP06 118 aa8.67□□□□□ -1.02
GAPVD1-220ENST00000497580 ST20-AS1Q8NBB2 130 aa8.67□□□□□ -1.02
GAPVD1-220ENST00000497580 C19orf73Q9NVV2 129 aa8.66□□□□□ -1.02
GAPVD1-220ENST00000497580 PKD1L1Q8TDX9 2849 aa8.66□□□□□ -1.02
GAPVD1-220ENST00000497580 CMC4P56277 68 aaPredicted RBP8.65□□□□□ -1.02
GAPVD1-220ENST00000497580 KPRPQ5T749 579 aaPredicted RBP8.65□□□□□ -1.03
GAPVD1-220ENST00000497580 LINC00528Q8N1L1 170 aa8.65□□□□□ -1.03
GAPVD1-220ENST00000497580 CHKB-CPT1BH3BT56 60 aa8.64□□□□□ -1.03
GAPVD1-220ENST00000497580 Q1T7F1 81 aa8.64□□□□□ -1.03
GAPVD1-220ENST00000497580 WFDC13Q8IUB5 93 aa8.64□□□□□ -1.03
GAPVD1-220ENST00000497580 VPREB1P12018 145 aa8.64□□□□□ -1.03
GAPVD1-220ENST00000497580 Q6ZRU5 148 aa8.64□□□□□ -1.03
GAPVD1-220ENST00000497580 MAST4O15021 2626 aa8.64□□□□□ -1.03
GAPVD1-220ENST00000497580 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.64□□□□□ -1.03
GAPVD1-220ENST00000497580 ETDCA0A1B0GVM5 59 aa8.64□□□□□ -1.03
GAPVD1-220ENST00000497580 M0R378 163 aa8.63□□□□□ -1.03
GAPVD1-220ENST00000497580 K7EQZ3 153 aa8.63□□□□□ -1.03
GAPVD1-220ENST00000497580 IGLV1-51P01701 117 aa8.62□□□□□ -1.03
GAPVD1-220ENST00000497580 FSHBP01225 129 aa8.62□□□□□ -1.03
GAPVD1-220ENST00000497580 MRPL55Q7Z7F7 128 aaKnown RBP8.61□□□□□ -1.03
GAPVD1-220ENST00000497580 COL6A5A8TX70 2615 aa8.61□□□□□ -1.03
GAPVD1-220ENST00000497580 NKAPP1Q8N9T2 125 aa8.6□□□□□ -1.03
GAPVD1-220ENST00000497580 A0A0G2JQZ4 141 aa8.6□□□□□ -1.03
GAPVD1-220ENST00000497580 A0A1W2PNN7 141 aa8.6□□□□□ -1.03
GAPVD1-220ENST00000497580 RPL37AP8A6NKH3 93 aa8.6□□□□□ -1.03
GAPVD1-220ENST00000497580 Q8N377 158 aa8.6□□□□□ -1.03
GAPVD1-220ENST00000497580 X6R8D5 127 aa8.6□□□□□ -1.03
GAPVD1-220ENST00000497580 TENM4Q6N022 2769 aa8.6□□□□□ -1.03
GAPVD1-220ENST00000497580 C1orf137Q5JT78 98 aa8.6□□□□□ -1.03
GAPVD1-220ENST00000497580 WFDC10BQ8IUB3 73 aa8.6□□□□□ -1.03
GAPVD1-220ENST00000497580 PSCAO43653 123 aa8.59□□□□□ -1.03
GAPVD1-220ENST00000497580 SYCNQ0VAF6 134 aa8.59□□□□□ -1.03
GAPVD1-220ENST00000497580 STAB1Q9NY15 2570 aa8.59□□□□□ -1.03
GAPVD1-220ENST00000497580 A0A1W2PNM2 257 aa8.59□□□□□ -1.03
GAPVD1-220ENST00000497580 LINC00208Q96KT6 92 aa8.58□□□□□ -1.04
GAPVD1-220ENST00000497580 PRR15LQ9BU68 103 aa8.58□□□□□ -1.04
GAPVD1-220ENST00000497580 TRRAPQ9Y4A5 3859 aa8.58□□□□□ -1.04
GAPVD1-220ENST00000497580 CD164Q04900 197 aa8.56□□□□□ -1.04
GAPVD1-220ENST00000497580 FBN1P35555 2871 aaKnown RBP8.55□□□□□ -1.04
GAPVD1-220ENST00000497580 MP68P56378 58 aa8.55□□□□□ -1.04
GAPVD1-220ENST00000497580 DSCR10P59022 87 aa8.55□□□□□ -1.04
GAPVD1-220ENST00000497580 LELP1Q5T871 98 aa8.55□□□□□ -1.04
GAPVD1-220ENST00000497580 GVQW2A0A096LPI5 108 aaPredicted RBP8.54□□□□□ -1.04
GAPVD1-220ENST00000497580 UBE2BP63146 152 aa8.54□□□□□ -1.04
GAPVD1-220ENST00000497580 OTOGQ6ZRI0 2925 aa8.54□□□□□ -1.04
GAPVD1-220ENST00000497580 HCG22E2RYF7 251 aa8.54□□□□□ -1.04
GAPVD1-220ENST00000497580 Q5VV11 94 aa8.54□□□□□ -1.04
GAPVD1-220ENST00000497580 B9D2Q9BPU9 175 aa8.54□□□□□ -1.04
GAPVD1-220ENST00000497580 A6NED7 52 aa8.53□□□□□ -1.04
GAPVD1-220ENST00000497580 ZCCHC13Q8WW36 166 aaKnown RBP8.53□□□□□ -1.04
GAPVD1-220ENST00000497580 EGFEM1PQ0D2K5 195 aa8.52□□□□□ -1.05
GAPVD1-220ENST00000497580 LYRM9A8MSI8 78 aa8.52□□□□□ -1.05
GAPVD1-220ENST00000497580 MGAM2Q2M2H8 2515 aa8.52□□□□□ -1.05
GAPVD1-220ENST00000497580 UBE2AP49459 152 aa8.51□□□□□ -1.05
GAPVD1-220ENST00000497580 SERTAD4-AS1Q5TG53 156 aa8.51□□□□□ -1.05
GAPVD1-220ENST00000497580 Q8NBF4 154 aa8.51□□□□□ -1.05
GAPVD1-220ENST00000497580 C7orf33Q8WU49 177 aa8.51□□□□□ -1.05
GAPVD1-220ENST00000497580 IGKV2D-24A0A075B6R9 120 aa8.51□□□□□ -1.05
GAPVD1-220ENST00000497580 PRR34Q9NV39 138 aa8.5□□□□□ -1.05
GAPVD1-220ENST00000497580 C16orf90A8MZG2 172 aa8.5□□□□□ -1.05
GAPVD1-220ENST00000497580 RPL37AP61513 92 aaKnown RBP8.5□□□□□ -1.05
GAPVD1-220ENST00000497580 IGLV5-48A0A075B6I7 105 aa8.49□□□□□ -1.05
GAPVD1-220ENST00000497580 RBM12B-AS1Q9P1G2 102 aa8.49□□□□□ -1.05
GAPVD1-220ENST00000497580 KRTAP1-3Q8IUG1 177 aa8.49□□□□□ -1.05
GAPVD1-220ENST00000497580 NDUFB1O75438 58 aa8.49□□□□□ -1.05
GAPVD1-220ENST00000497580 CYP4F30PQ9H0H9 118 aa8.48□□□□□ -1.05
GAPVD1-220ENST00000497580 LCE6AA0A183 80 aa8.47□□□□□ -1.05
GAPVD1-220ENST00000497580 TENM3Q9P273 2699 aa8.47□□□□□ -1.05
GAPVD1-220ENST00000497580 NSD1Q96L73 2696 aaPredicted RBP8.47□□□□□ -1.05
GAPVD1-220ENST00000497580 FAM168BA1KXE4 195 aa8.46□□□□□ -1.05
GAPVD1-220ENST00000497580 KTN1-AS1Q86SY8 53 aa8.46□□□□□ -1.05
GAPVD1-220ENST00000497580 Q9BRP9 147 aa8.46□□□□□ -1.06
GAPVD1-220ENST00000497580 KRTAP10-3P60369 221 aa8.45□□□□□ -1.06
GAPVD1-220ENST00000497580 C15orf56Q8N910 161 aa8.45□□□□□ -1.06
GAPVD1-220ENST00000497580 H0Y9P7 68 aa8.45□□□□□ -1.06
GAPVD1-220ENST00000497580 SPART-AS1P0CW21 52 aa8.45□□□□□ -1.06
GAPVD1-220ENST00000497580 LINC00588Q9Y4M8 146 aa8.45□□□□□ -1.06
GAPVD1-220ENST00000497580 A0A087WSZ3 146 aa8.44□□□□□ -1.06
GAPVD1-220ENST00000497580 Q8N9P0 234 aaPredicted RBP8.44□□□□□ -1.06
GAPVD1-220ENST00000497580 Q6ZRX8 168 aa8.44□□□□□ -1.06
GAPVD1-220ENST00000497580 DHRS4-AS1Q9P1J3 65 aa8.44□□□□□ -1.06
GAPVD1-220ENST00000497580 KCNQ1DNQ9H478 68 aa8.43□□□□□ -1.06
GAPVD1-220ENST00000497580 LIMD2Q9BT23 127 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms