RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 DEFB131BA0A096LNP1 70 aa1.27□□□□□ -2.21
VPS36-206ENST00000497149 LINC01546A6NGU7 62 aa1.27□□□□□ -2.21
VPS36-206ENST00000497149 USMG5Q96IX5 58 aa1.27□□□□□ -2.21
VPS36-206ENST00000497149 PLCE1Q9P212 2302 aa1.27□□□□□ -2.21
VPS36-206ENST00000497149 LRRC37AA6NMS7 1700 aa1.26□□□□□ -2.21
VPS36-206ENST00000497149 NESP48681 1621 aa1.26□□□□□ -2.21
VPS36-206ENST00000497149 AGLP35573 1532 aa1.26□□□□□ -2.21
VPS36-206ENST00000497149 TULP4Q9NRJ4 1543 aa1.26□□□□□ -2.21
VPS36-206ENST00000497149 CACNA1BQ00975 2339 aa1.26□□□□□ -2.21
VPS36-206ENST00000497149 CACNA1EQ15878 2313 aa1.26□□□□□ -2.21
VPS36-206ENST00000497149 BPTFQ12830 3046 aa1.26□□□□□ -2.21
VPS36-206ENST00000497149 DOT1LQ8TEK3 1739 aa1.26□□□□□ -2.21
VPS36-206ENST00000497149 COX6B1P14854 86 aa1.25□□□□□ -2.21
VPS36-206ENST00000497149 PIGYQ3MUY2 71 aa1.25□□□□□ -2.21
VPS36-206ENST00000497149 SSC5DA1L4H1 1573 aa1.25□□□□□ -2.21
VPS36-206ENST00000497149 QSER1Q2KHR3 1735 aa1.24□□□□□ -2.21
VPS36-206ENST00000497149 FAM208BQ5VWN6 2430 aa1.24□□□□□ -2.21
VPS36-206ENST00000497149 SNRPGP62308 76 aaKnown RBP1.24□□□□□ -2.21
VPS36-206ENST00000497149 COX6B2Q6YFQ2 88 aa1.24□□□□□ -2.21
VPS36-206ENST00000497149 NWD1Q149M9 1564 aa1.24□□□□□ -2.21
VPS36-206ENST00000497149 E9PCH4 1651 aa1.23□□□□□ -2.21
VPS36-206ENST00000497149 NRXN3Q9Y4C0 1643 aa1.23□□□□□ -2.21
VPS36-206ENST00000497149 SPINK4O60575 86 aa1.23□□□□□ -2.21
VPS36-206ENST00000497149 TMEM167BQ9NRX6 74 aa1.23□□□□□ -2.21
VPS36-206ENST00000497149 TIMM8BQ9Y5J9 83 aaPredicted RBP1.23□□□□□ -2.21
VPS36-206ENST00000497149 SLIT1O75093 1534 aa1.23□□□□□ -2.21
VPS36-206ENST00000497149 JMJD1CQ15652 2540 aa1.22□□□□□ -2.21
VPS36-206ENST00000497149 NDUFA3O95167 84 aa1.22□□□□□ -2.21
VPS36-206ENST00000497149 CRIP1P50238 77 aa1.22□□□□□ -2.21
VPS36-206ENST00000497149 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.22□□□□□ -2.21
VPS36-206ENST00000497149 TRPM2O94759 1503 aa1.21□□□□□ -2.22
VPS36-206ENST00000497149 CCL22O00626 93 aa1.21□□□□□ -2.22
VPS36-206ENST00000497149 LINC00158P58513 81 aa1.21□□□□□ -2.22
VPS36-206ENST00000497149 TP53AIP1Q9HCN2 124 aa1.21□□□□□ -2.22
VPS36-206ENST00000497149 CDKN2A-AS1Q9UH64 79 aa1.21□□□□□ -2.22
VPS36-206ENST00000497149 DDX60LQ5H9U9 1706 aaKnown RBP1.2□□□□□ -2.22
VPS36-206ENST00000497149 CDC42BPAQ5VT25 1732 aa1.2□□□□□ -2.22
VPS36-206ENST00000497149 FAM208AQ9UK61 1670 aaKnown RBP1.2□□□□□ -2.22
VPS36-206ENST00000497149 CNTRLQ7Z7A1 2325 aa1.2□□□□□ -2.22
VPS36-206ENST00000497149 K7EQZ3 153 aa1.2□□□□□ -2.22
VPS36-206ENST00000497149 WNK2Q9Y3S1 2297 aa1.2□□□□□ -2.22
VPS36-206ENST00000497149 NFAT5O94916 1531 aa1.2□□□□□ -2.22
VPS36-206ENST00000497149 K7EIL1 84 aa1.19□□□□□ -2.22
VPS36-206ENST00000497149 PTPRZ1P23471 2315 aaPredicted RBP1.19□□□□□ -2.22
VPS36-206ENST00000497149 DDX60Q8IY21 1712 aaKnown RBP1.19□□□□□ -2.22
VPS36-206ENST00000497149 Q8IZM0 81 aa1.19□□□□□ -2.22
VPS36-206ENST00000497149 DEFB123Q8N688 67 aa1.19□□□□□ -2.22
VPS36-206ENST00000497149 MRPL34Q9BQ48 92 aaKnown RBP1.19□□□□□ -2.22
VPS36-206ENST00000497149 PTPRQQ9UMZ3 2332 aa1.19□□□□□ -2.22
VPS36-206ENST00000497149 PKDREJQ9NTG1 2253 aa1.18□□□□□ -2.22
VPS36-206ENST00000497149 LYNX1G3V0Z9 82 aa1.18□□□□□ -2.22
VPS36-206ENST00000497149 CNFNQ9BYD5 112 aa1.18□□□□□ -2.22
VPS36-206ENST00000497149 SPINK9Q5DT21 86 aa1.17□□□□□ -2.22
VPS36-206ENST00000497149 PRO3102Q9H379 93 aa1.17□□□□□ -2.22
VPS36-206ENST00000497149 DEPDC5O75140 1603 aa1.17□□□□□ -2.22
VPS36-206ENST00000497149 SAMD9LQ8IVG5 1584 aa1.17□□□□□ -2.22
VPS36-206ENST00000497149 ASH1LQ9NR48 2969 aaKnown RBP1.16□□□□□ -2.22
VPS36-206ENST00000497149 LINC00308Q8TCZ7 52 aa1.16□□□□□ -2.22
VPS36-206ENST00000497149 USF3Q68DE3 2245 aa1.16□□□□□ -2.22
VPS36-206ENST00000497149 C2CD3Q4AC94 2353 aa1.15□□□□□ -2.22
VPS36-206ENST00000497149 C4AP0C0L4 1744 aa1.15□□□□□ -2.22
VPS36-206ENST00000497149 ROS1P08922 2347 aa1.15□□□□□ -2.23
VPS36-206ENST00000497149 I3L2K1 104 aa1.15□□□□□ -2.23
VPS36-206ENST00000497149 COX6A2Q02221 97 aa1.15□□□□□ -2.23
VPS36-206ENST00000497149 SMIM2Q9BVW6 85 aa1.15□□□□□ -2.23
VPS36-206ENST00000497149 PIEZO2Q9H5I5 2752 aa1.15□□□□□ -2.23
VPS36-206ENST00000497149 PDE4DIPQ5VU43 2346 aa1.15□□□□□ -2.23
VPS36-206ENST00000497149 ATP7AQ04656 1500 aa1.15□□□□□ -2.23
VPS36-206ENST00000497149 SPTBN2O15020 2390 aa1.14□□□□□ -2.23
VPS36-206ENST00000497149 TOGARAM1Q9Y4F4 1720 aa1.13□□□□□ -2.23
VPS36-206ENST00000497149 MINOS1Q5TGZ0 78 aa1.13□□□□□ -2.23
VPS36-206ENST00000497149 PRO0255Q9UI72 69 aa1.12□□□□□ -2.23
VPS36-206ENST00000497149 KNL1Q8NG31 2342 aa1.11□□□□□ -2.23
VPS36-206ENST00000497149 TNRC6CQ9HCJ0 1690 aaKnown RBP1.11□□□□□ -2.23
VPS36-206ENST00000497149 SPTBN1Q01082 2364 aaKnown RBP1.11□□□□□ -2.23
VPS36-206ENST00000497149 C6orf48Q9UBA6 75 aa1.11□□□□□ -2.23
VPS36-206ENST00000497149 C10orf95Q9H7T3 257 aa1.1□□□□□ -2.23
VPS36-206ENST00000497149 KIF21BO75037 1637 aa1.09□□□□□ -2.23
VPS36-206ENST00000497149 NDUFA1O15239 70 aa1.09□□□□□ -2.23
VPS36-206ENST00000497149 PRB3Q04118 309 aaPredicted RBP1.09□□□□□ -2.23
VPS36-206ENST00000497149 TFF3Q07654 80 aa1.09□□□□□ -2.23
VPS36-206ENST00000497149 Q5VSD8 79 aa1.09□□□□□ -2.23
VPS36-206ENST00000497149 APLNQ9ULZ1 77 aa1.09□□□□□ -2.23
VPS36-206ENST00000497149 IQGAP1P46940 1657 aa1.08□□□□□ -2.24
VPS36-206ENST00000497149 ZNF462Q96JM2 2506 aa1.08□□□□□ -2.24
VPS36-206ENST00000497149 LOC730098B7Z3J9 87 aa1.08□□□□□ -2.24
VPS36-206ENST00000497149 SPRR1AP35321 89 aa1.08□□□□□ -2.24
VPS36-206ENST00000497149 TPRP12270 2363 aaKnown RBP1.07□□□□□ -2.24
VPS36-206ENST00000497149 LMO7Q8WWI1 1683 aa1.07□□□□□ -2.24
VPS36-206ENST00000497149 C4BP0C0L5 1744 aa1.07□□□□□ -2.24
VPS36-206ENST00000497149 WFDC13Q8IUB5 93 aa1.07□□□□□ -2.24
VPS36-206ENST00000497149 F8P00451 2351 aa1.07□□□□□ -2.24
VPS36-206ENST00000497149 H0YAA0 97 aa1.06□□□□□ -2.24
VPS36-206ENST00000497149 H3BUA1 57 aa1.06□□□□□ -2.24
VPS36-206ENST00000497149 H1FX-AS1Q4G0G2 97 aa1.06□□□□□ -2.24
VPS36-206ENST00000497149 DEFB105AQ8NG35 78 aa1.06□□□□□ -2.24
VPS36-206ENST00000497149 ABCA12Q86UK0 2595 aa1.05□□□□□ -2.24
VPS36-206ENST00000497149 IAPPP10997 89 aa1.05□□□□□ -2.24
VPS36-206ENST00000497149 ZNF292O60281 2723 aa1.05□□□□□ -2.24
VPS36-206ENST00000497149 CACNA1HO95180 2353 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms