RNA–Protein interactions for RNA: ENST00000496854.1

ITGAV-208, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 611 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-208ENST00000496854 C18orf32Q8TCD1 76 aa4.37□□□□□ -1.71
ITGAV-208ENST00000496854 TRBV10-3A0A0K0K1G6 114 aa4.36□□□□□ -1.71
ITGAV-208ENST00000496854 TMEM218A2RU14 115 aa4.36□□□□□ -1.71
ITGAV-208ENST00000496854 ERC2-IT1O76042 136 aa4.36□□□□□ -1.71
ITGAV-208ENST00000496854 SMIM13P0DJ93 91 aa4.36□□□□□ -1.71
ITGAV-208ENST00000496854 S100PP25815 95 aa4.36□□□□□ -1.71
ITGAV-208ENST00000496854 CLLU1Q5K131 121 aa4.36□□□□□ -1.71
ITGAV-208ENST00000496854 BAGE3Q86Y29 109 aa4.36□□□□□ -1.71
ITGAV-208ENST00000496854 BOD1L2Q8IYS8 172 aa4.36□□□□□ -1.71
ITGAV-208ENST00000496854 ETDCA0A1B0GVM5 59 aa4.35□□□□□ -1.71
ITGAV-208ENST00000496854 TMEM223A0PJW6 202 aa4.35□□□□□ -1.71
ITGAV-208ENST00000496854 MIR7-3HGQ8N6C7 128 aa4.35□□□□□ -1.71
ITGAV-208ENST00000496854 KCNQ1DNQ9H478 68 aa4.35□□□□□ -1.71
ITGAV-208ENST00000496854 LINC00614P0C842 121 aa4.34□□□□□ -1.71
ITGAV-208ENST00000496854 RPS29P62273 56 aaKnown RBP4.34□□□□□ -1.71
ITGAV-208ENST00000496854 MT1HP80294 61 aa4.34□□□□□ -1.71
ITGAV-208ENST00000496854 COX19Q49B96 90 aa4.34□□□□□ -1.71
ITGAV-208ENST00000496854 MEIG1Q5JSS6 88 aa4.34□□□□□ -1.71
ITGAV-208ENST00000496854 FAM19A2Q8N3H0 131 aa4.34□□□□□ -1.71
ITGAV-208ENST00000496854 Q9BRP9 147 aa4.34□□□□□ -1.71
ITGAV-208ENST00000496854 NDUFA12Q9UI09 145 aa4.34□□□□□ -1.71
ITGAV-208ENST00000496854 CHTOPQ9Y3Y2 248 aaKnown RBP4.34□□□□□ -1.71
ITGAV-208ENST00000496854 UQCC3Q6UW78 93 aa4.33□□□□□ -1.72
ITGAV-208ENST00000496854 SEC11CQ9BY50 192 aa4.33□□□□□ -1.72
ITGAV-208ENST00000496854 TSPEAR-AS2P59090 65 aa4.32□□□□□ -1.72
ITGAV-208ENST00000496854 SLC25A20O43772 301 aa4.31□□□□□ -1.72
ITGAV-208ENST00000496854 IFITM2Q01629 132 aa4.31□□□□□ -1.72
ITGAV-208ENST00000496854 RHEBQ15382 184 aa4.31□□□□□ -1.72
ITGAV-208ENST00000496854 Q6ZRX8 168 aa4.31□□□□□ -1.72
ITGAV-208ENST00000496854 RPS10P5Q9NQ39 176 aa4.31□□□□□ -1.72
ITGAV-208ENST00000496854 TRAPPC1Q9Y5R8 145 aa4.31□□□□□ -1.72
ITGAV-208ENST00000496854 TRAV12-1A0A0B4J245 112 aa4.3□□□□□ -1.72
ITGAV-208ENST00000496854 ATP6V1G1O75348 118 aa4.3□□□□□ -1.72
ITGAV-208ENST00000496854 DDTP30046 118 aa4.3□□□□□ -1.72
ITGAV-208ENST00000496854 HERV-K104P63124 156 aa4.3□□□□□ -1.72
ITGAV-208ENST00000496854 C9orf153Q5TBE3 101 aa4.3□□□□□ -1.72
ITGAV-208ENST00000496854 SSBP3-AS1Q7Z2R9 100 aa4.3□□□□□ -1.72
ITGAV-208ENST00000496854 C10orf91Q5T1B1 145 aa4.29□□□□□ -1.72
ITGAV-208ENST00000496854 COMMD7Q86VX2 200 aa4.29□□□□□ -1.72
ITGAV-208ENST00000496854 ST20-AS1Q8NBB2 130 aa4.29□□□□□ -1.72
ITGAV-208ENST00000496854 IFI27L1Q96BM0 104 aa4.29□□□□□ -1.72
ITGAV-208ENST00000496854 PCOTHQ58A44 107 aa4.28□□□□□ -1.72
ITGAV-208ENST00000496854 IGLV8-61A0A075B6I0 122 aa4.27□□□□□ -1.73
ITGAV-208ENST00000496854 TRAV23DV6A0A075B6W5 121 aa4.27□□□□□ -1.73
ITGAV-208ENST00000496854 LOC107984156A0A0G2JMH3 177 aa4.27□□□□□ -1.73
ITGAV-208ENST00000496854 TRBV10-2A0A0K0K1G8 114 aa4.27□□□□□ -1.73
ITGAV-208ENST00000496854 MYMXA0A1B0GTQ4 84 aa4.27□□□□□ -1.73
ITGAV-208ENST00000496854 A4D1N5 150 aa4.27□□□□□ -1.73
ITGAV-208ENST00000496854 C9orf92A6NGG3 77 aa4.27□□□□□ -1.73
ITGAV-208ENST00000496854 H0Y8G0 127 aa4.27□□□□□ -1.73
ITGAV-208ENST00000496854 IGLV6-57P01721 117 aa4.27□□□□□ -1.73
ITGAV-208ENST00000496854 S100A12P80511 92 aa4.27□□□□□ -1.73
ITGAV-208ENST00000496854 ARL17AQ8IVW1 177 aa4.27□□□□□ -1.73
ITGAV-208ENST00000496854 SPANXB1Q9NS25 103 aaPredicted RBP4.27□□□□□ -1.73
ITGAV-208ENST00000496854 SOSTDC1Q6X4U4 206 aa4.26□□□□□ -1.73
ITGAV-208ENST00000496854 CHCHD1Q96BP2 118 aaKnown RBP4.26□□□□□ -1.73
ITGAV-208ENST00000496854 LITAFQ99732 161 aa4.26□□□□□ -1.73
ITGAV-208ENST00000496854 MAP1LC3CQ9BXW4 147 aa4.26□□□□□ -1.73
ITGAV-208ENST00000496854 FLGP20930 4061 aaPredicted RBP4.25□□□□□ -1.73
ITGAV-208ENST00000496854 C5orf52A6NGY3 159 aa4.25□□□□□ -1.73
ITGAV-208ENST00000496854 LINC00587B1AMM8 73 aa4.25□□□□□ -1.73
ITGAV-208ENST00000496854 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
ITGAV-208ENST00000496854 NPC2P61916 151 aa4.25□□□□□ -1.73
ITGAV-208ENST00000496854 HRCT1Q6UXD1 115 aa4.25□□□□□ -1.73
ITGAV-208ENST00000496854 LEPROTO15243 131 aa4.24□□□□□ -1.73
ITGAV-208ENST00000496854 ZNF73O43830 326 aaPredicted RBP4.24□□□□□ -1.73
ITGAV-208ENST00000496854 NDUFC2O95298 119 aa4.24□□□□□ -1.73
ITGAV-208ENST00000496854 S100A7L2Q5SY68 101 aa4.24□□□□□ -1.73
ITGAV-208ENST00000496854 YPEL4Q96NS1 127 aa4.24□□□□□ -1.73
ITGAV-208ENST00000496854 MIEN1Q9BRT3 115 aa4.24□□□□□ -1.73
ITGAV-208ENST00000496854 J3QQQ9 107 aa4.23□□□□□ -1.73
ITGAV-208ENST00000496854 HSBP1O75506 76 aa4.23□□□□□ -1.73
ITGAV-208ENST00000496854 JOSD1Q15040 202 aaPredicted RBP4.23□□□□□ -1.73
ITGAV-208ENST00000496854 LCE1FQ5T754 118 aa4.23□□□□□ -1.73
ITGAV-208ENST00000496854 PMCHL2Q9BQD1 86 aa4.23□□□□□ -1.73
ITGAV-208ENST00000496854 LIMD2Q9BT23 127 aa4.23□□□□□ -1.73
ITGAV-208ENST00000496854 SPRR1BP22528 89 aa4.22□□□□□ -1.73
ITGAV-208ENST00000496854 APOC3P02656 99 aa4.21□□□□□ -1.74
ITGAV-208ENST00000496854 PLNP26678 52 aa4.21□□□□□ -1.74
ITGAV-208ENST00000496854 ADAMTSL4-AS1Q5T5F5 129 aa4.21□□□□□ -1.74
ITGAV-208ENST00000496854 A0A0J9YXY3 114 aa4.2□□□□□ -1.74
ITGAV-208ENST00000496854 SERF1AO75920 110 aa4.2□□□□□ -1.74
ITGAV-208ENST00000496854 LEPROTL1O95214 131 aa4.2□□□□□ -1.74
ITGAV-208ENST00000496854 LGALS3P17931 250 aaKnown RBP4.2□□□□□ -1.74
ITGAV-208ENST00000496854 NMUP48645 174 aa4.2□□□□□ -1.74
ITGAV-208ENST00000496854 KRTAP10-12P60413 245 aa4.2□□□□□ -1.74
ITGAV-208ENST00000496854 H7C2G1 150 aa4.19□□□□□ -1.74
ITGAV-208ENST00000496854 DPM2O94777 84 aa4.19□□□□□ -1.74
ITGAV-208ENST00000496854 HERVK_113P61574 105 aa4.19□□□□□ -1.74
ITGAV-208ENST00000496854 Q1RN00 199 aa4.19□□□□□ -1.74
ITGAV-208ENST00000496854 PRAC1Q96KF2 57 aa4.19□□□□□ -1.74
ITGAV-208ENST00000496854 M0R2T5 61 aa4.18□□□□□ -1.74
ITGAV-208ENST00000496854 SNAPINO95295 136 aa4.18□□□□□ -1.74
ITGAV-208ENST00000496854 IGKCP01834 107 aa4.18□□□□□ -1.74
ITGAV-208ENST00000496854 ELOF1P60002 83 aaKnown RBP4.18□□□□□ -1.74
ITGAV-208ENST00000496854 RPL37P61927 97 aaKnown RBP4.18□□□□□ -1.74
ITGAV-208ENST00000496854 SVBPQ8N300 66 aa4.18□□□□□ -1.74
ITGAV-208ENST00000496854 USH2AO75445 5202 aa4.18□□□□□ -1.74
ITGAV-208ENST00000496854 A0A0G2JQZ4 141 aa4.17□□□□□ -1.74
ITGAV-208ENST00000496854 FABP4P15090 132 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms