RNA–Protein interactions for RNA: ENST00000496838.1

TSC22D1-210, Transcript of TSC22 domain family member 1, humanhuman

TSL 1 (best)

Gene TSC22D1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-210ENST00000496838 LINC00304Q8N9R0 145 aa2.54□□□□□ -2
TSC22D1-210ENST00000496838 TMEM263Q8WUH6 116 aaKnown RBP2.54□□□□□ -2
TSC22D1-210ENST00000496838 Q9BRP9 147 aa2.54□□□□□ -2
TSC22D1-210ENST00000496838 ST20Q9HBF5 79 aa2.54□□□□□ -2
TSC22D1-210ENST00000496838 NOP10Q9NPE3 64 aaKnown RBP2.54□□□□□ -2
TSC22D1-210ENST00000496838 DYNC2H1Q8NCM8 4307 aaKnown RBP2.53□□□□□ -2
TSC22D1-210ENST00000496838 A8MWV9 139 aa2.53□□□□□ -2
TSC22D1-210ENST00000496838 DEFB4AO15263 64 aa2.53□□□□□ -2
TSC22D1-210ENST00000496838 CRYGAP11844 174 aa2.53□□□□□ -2
TSC22D1-210ENST00000496838 ZNF56Q15929 161 aa2.53□□□□□ -2
TSC22D1-210ENST00000496838 DEFB135Q30KP9 77 aa2.53□□□□□ -2
TSC22D1-210ENST00000496838 C20orf166-AS1Q96NR2 134 aa2.53□□□□□ -2
TSC22D1-210ENST00000496838 VAMP8Q9BV40 100 aa2.53□□□□□ -2
TSC22D1-210ENST00000496838 SNHG12Q9BXW3 62 aa2.53□□□□□ -2
TSC22D1-210ENST00000496838 MRPL35Q9NZE8 188 aaKnown RBP2.53□□□□□ -2
TSC22D1-210ENST00000496838 HSPB8Q9UJY1 196 aa2.53□□□□□ -2
TSC22D1-210ENST00000496838 TENM3Q9P273 2699 aa2.53□□□□□ -2.01
TSC22D1-210ENST00000496838 A0A087WX48 190 aa2.52□□□□□ -2.01
TSC22D1-210ENST00000496838 FABP2P12104 132 aa2.52□□□□□ -2.01
TSC22D1-210ENST00000496838 UBE2D3P61077 147 aa2.52□□□□□ -2.01
TSC22D1-210ENST00000496838 UBE2D2P62837 147 aa2.52□□□□□ -2.01
TSC22D1-210ENST00000496838 RPS28P62857 69 aaKnown RBP2.52□□□□□ -2.01
TSC22D1-210ENST00000496838 HRCT1Q6UXD1 115 aa2.52□□□□□ -2.01
TSC22D1-210ENST00000496838 SOSTDC1Q6X4U4 206 aa2.52□□□□□ -2.01
TSC22D1-210ENST00000496838 PRR15Q8IV56 129 aa2.52□□□□□ -2.01
TSC22D1-210ENST00000496838 CARD19Q96LW7 228 aa2.52□□□□□ -2.01
TSC22D1-210ENST00000496838 AMELXQ99217 191 aa2.52□□□□□ -2.01
TSC22D1-210ENST00000496838 TMEM126AQ9H061 195 aa2.52□□□□□ -2.01
TSC22D1-210ENST00000496838 NBEAL2Q6ZNJ1 2754 aa2.52□□□□□ -2.01
TSC22D1-210ENST00000496838 COL6A5A8TX70 2615 aa2.51□□□□□ -2.01
TSC22D1-210ENST00000496838 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.51□□□□□ -2.01
TSC22D1-210ENST00000496838 TRAV12-1A0A0B4J245 112 aa2.51□□□□□ -2.01
TSC22D1-210ENST00000496838 IGKV2-29A2NJV5 120 aaPredicted RBP2.51□□□□□ -2.01
TSC22D1-210ENST00000496838 I3L3M4 83 aa2.51□□□□□ -2.01
TSC22D1-210ENST00000496838 FUSP35637 526 aaKnown RBP eCLIP2.51□□□□□ -2.01
TSC22D1-210ENST00000496838 RHOHQ15669 191 aa2.51□□□□□ -2.01
TSC22D1-210ENST00000496838 Q6ZUT4 128 aa2.51□□□□□ -2.01
TSC22D1-210ENST00000496838 CST9LQ9H4G1 147 aa2.51□□□□□ -2.01
TSC22D1-210ENST00000496838 UBE2D4Q9Y2X8 147 aa2.51□□□□□ -2.01
TSC22D1-210ENST00000496838 TRBV6-4A0A1B0GX49 114 aa2.5□□□□□ -2.01
TSC22D1-210ENST00000496838 C20orf202A1L168 122 aa2.5□□□□□ -2.01
TSC22D1-210ENST00000496838 F8VRH5 84 aa2.5□□□□□ -2.01
TSC22D1-210ENST00000496838 K7EIL1 84 aa2.5□□□□□ -2.01
TSC22D1-210ENST00000496838 K7EMI3 77 aa2.5□□□□□ -2.01
TSC22D1-210ENST00000496838 K7EP13 123 aa2.5□□□□□ -2.01
TSC22D1-210ENST00000496838 DPM2O94777 84 aa2.5□□□□□ -2.01
TSC22D1-210ENST00000496838 PPP1R17O96001 155 aa2.5□□□□□ -2.01
TSC22D1-210ENST00000496838 IGKCP01834 107 aa2.5□□□□□ -2.01
TSC22D1-210ENST00000496838 COX8AP10176 69 aa2.5□□□□□ -2.01
TSC22D1-210ENST00000496838 CKS1BP61024 79 aa2.5□□□□□ -2.01
TSC22D1-210ENST00000496838 C3orf56Q8N813 242 aa2.5□□□□□ -2.01
TSC22D1-210ENST00000496838 NBEAL1Q6ZS30 2694 aa2.5□□□□□ -2.01
TSC22D1-210ENST00000496838 VPS13DQ5THJ4 4388 aa2.49□□□□□ -2.01
TSC22D1-210ENST00000496838 TRBV7-3A0A075B6L6 115 aa2.49□□□□□ -2.01
TSC22D1-210ENST00000496838 TRBV10-1A0A0K0K1A3 114 aa2.49□□□□□ -2.01
TSC22D1-210ENST00000496838 A0A1B0GX51 115 aa2.49□□□□□ -2.01
TSC22D1-210ENST00000496838 TIMM17BO60830 172 aa2.49□□□□□ -2.01
TSC22D1-210ENST00000496838 DEFB130BP0DP73 79 aa2.49□□□□□ -2.01
TSC22D1-210ENST00000496838 DEFB130AP0DP74 79 aa2.49□□□□□ -2.01
TSC22D1-210ENST00000496838 UBE2D1P51668 147 aa2.49□□□□□ -2.01
TSC22D1-210ENST00000496838 COX6A2Q02221 97 aa2.49□□□□□ -2.01
TSC22D1-210ENST00000496838 Q6ZQT0 140 aa2.49□□□□□ -2.01
TSC22D1-210ENST00000496838 TMEM141Q96I45 108 aa2.49□□□□□ -2.01
TSC22D1-210ENST00000496838 C2orf88Q9BSF0 95 aa2.49□□□□□ -2.01
TSC22D1-210ENST00000496838 UQCR10Q9UDW1 63 aa2.49□□□□□ -2.01
TSC22D1-210ENST00000496838 PLECQ15149 4684 aaKnown RBP2.49□□□□□ -2.01
TSC22D1-210ENST00000496838 NOTCH1P46531 2555 aa2.49□□□□□ -2.01
TSC22D1-210ENST00000496838 TRGV2A0A075B6R0 118 aa2.48□□□□□ -2.01
TSC22D1-210ENST00000496838 A0A096LPF7 62 aa2.48□□□□□ -2.01
TSC22D1-210ENST00000496838 A0A0J9YY99 117 aa2.48□□□□□ -2.01
TSC22D1-210ENST00000496838 A0A1B0GV90 55 aa2.48□□□□□ -2.01
TSC22D1-210ENST00000496838 DLEU1O43261 78 aa2.48□□□□□ -2.01
TSC22D1-210ENST00000496838 KRTAP10-10P60014 251 aa2.48□□□□□ -2.01
TSC22D1-210ENST00000496838 MRPS36P82909 103 aaKnown RBP2.48□□□□□ -2.01
TSC22D1-210ENST00000496838 BVES-AS1Q5T3Y7 98 aa2.48□□□□□ -2.01
TSC22D1-210ENST00000496838 TIMM21Q9BVV7 248 aa2.48□□□□□ -2.01
TSC22D1-210ENST00000496838 MEGF8Q7Z7M0 2845 aa2.48□□□□□ -2.01
TSC22D1-210ENST00000496838 PRKDCP78527 4128 aaKnown RBP2.48□□□□□ -2.01
TSC22D1-210ENST00000496838 TRBV25-1A0A075B6N4 114 aa2.47□□□□□ -2.01
TSC22D1-210ENST00000496838 TRBV6-8A0A0A6YYG3 113 aa2.47□□□□□ -2.01
TSC22D1-210ENST00000496838 TRGV4A0A0C4DH28 118 aa2.47□□□□□ -2.01
TSC22D1-210ENST00000496838 MIFP14174 115 aa2.47□□□□□ -2.01
TSC22D1-210ENST00000496838 PLNP26678 52 aa2.47□□□□□ -2.01
TSC22D1-210ENST00000496838 ESRGQ1W209 222 aa2.47□□□□□ -2.01
TSC22D1-210ENST00000496838 CDC42SE2Q9NRR3 84 aa2.47□□□□□ -2.01
TSC22D1-210ENST00000496838 PRO2289Q9P1D8 64 aa2.47□□□□□ -2.01
TSC22D1-210ENST00000496838 MGAM2Q2M2H8 2515 aa2.47□□□□□ -2.01
TSC22D1-210ENST00000496838 IGHV1-58A0A0C4DH39 117 aa2.46□□□□□ -2.02
TSC22D1-210ENST00000496838 K7ERJ3 54 aa2.46□□□□□ -2.02
TSC22D1-210ENST00000496838 M0R143 59 aa2.46□□□□□ -2.02
TSC22D1-210ENST00000496838 P0C880 135 aa2.46□□□□□ -2.02
TSC22D1-210ENST00000496838 SS18Q15532 418 aa2.46□□□□□ -2.02
TSC22D1-210ENST00000496838 PHF5AQ7RTV0 110 aaKnown RBP2.46□□□□□ -2.02
TSC22D1-210ENST00000496838 HIGD1BQ9P298 99 aa2.46□□□□□ -2.02
TSC22D1-210ENST00000496838 CDKN2A-AS1Q9UH64 79 aa2.46□□□□□ -2.02
TSC22D1-210ENST00000496838 PRO0255Q9UI72 69 aa2.46□□□□□ -2.02
TSC22D1-210ENST00000496838 MYMXA0A1B0GTQ4 84 aa2.45□□□□□ -2.02
TSC22D1-210ENST00000496838 LINC01549A6NIU2 74 aa2.45□□□□□ -2.02
TSC22D1-210ENST00000496838 IGKV4-1P06312 121 aa2.45□□□□□ -2.02
TSC22D1-210ENST00000496838 SPINK8P0C7L1 97 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms