RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 RPL36ALQ969Q0 106 aaKnown RBP4.24□□□□□ -1.73
SSBP1-213ENST00000496622 ZNF706Q9Y5V0 76 aaPredicted RBP4.24□□□□□ -1.73
SSBP1-213ENST00000496622 TRAV12-1A0A0B4J245 112 aa4.24□□□□□ -1.73
SSBP1-213ENST00000496622 A6NN06 94 aa4.24□□□□□ -1.73
SSBP1-213ENST00000496622 BAALC-AS2P0C853 105 aa4.24□□□□□ -1.73
SSBP1-213ENST00000496622 PLNP26678 52 aa4.24□□□□□ -1.73
SSBP1-213ENST00000496622 SPTSSBQ8NFR3 76 aa4.24□□□□□ -1.73
SSBP1-213ENST00000496622 CLEC2BQ92478 149 aa4.24□□□□□ -1.73
SSBP1-213ENST00000496622 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.23□□□□□ -1.73
SSBP1-213ENST00000496622 COX6A2Q02221 97 aa4.23□□□□□ -1.73
SSBP1-213ENST00000496622 PIK3CD-AS1Q5SR53 167 aa4.23□□□□□ -1.73
SSBP1-213ENST00000496622 TMEM141Q96I45 108 aa4.23□□□□□ -1.73
SSBP1-213ENST00000496622 LYSTQ99698 3801 aa4.23□□□□□ -1.73
SSBP1-213ENST00000496622 H0Y9J4 135 aa4.23□□□□□ -1.73
SSBP1-213ENST00000496622 Q1T7F1 81 aa4.23□□□□□ -1.73
SSBP1-213ENST00000496622 LINC01554Q52M75 96 aa4.23□□□□□ -1.73
SSBP1-213ENST00000496622 Q8NAQ8 132 aa4.23□□□□□ -1.73
SSBP1-213ENST00000496622 IGLV4-60A0A075B6I1 120 aa4.22□□□□□ -1.73
SSBP1-213ENST00000496622 RPL28P46779 137 aaKnown RBP4.22□□□□□ -1.73
SSBP1-213ENST00000496622 SYCNQ0VAF6 134 aa4.22□□□□□ -1.73
SSBP1-213ENST00000496622 ADAMTSL4-AS1Q5T5F5 129 aa4.22□□□□□ -1.73
SSBP1-213ENST00000496622 CLPSL2Q6UWE3 100 aa4.22□□□□□ -1.73
SSBP1-213ENST00000496622 NDUFC1O43677 76 aa4.22□□□□□ -1.73
SSBP1-213ENST00000496622 Q6ZRP5 223 aa4.22□□□□□ -1.73
SSBP1-213ENST00000496622 TRAV7A0A075B6U4 112 aa4.21□□□□□ -1.74
SSBP1-213ENST00000496622 TRBV6-4A0A1B0GX49 114 aa4.21□□□□□ -1.74
SSBP1-213ENST00000496622 REG3AQ06141 175 aa4.21□□□□□ -1.74
SSBP1-213ENST00000496622 CDKN2A-AS1Q9UH64 79 aa4.21□□□□□ -1.74
SSBP1-213ENST00000496622 TRBV10-1A0A0K0K1A3 114 aa4.21□□□□□ -1.74
SSBP1-213ENST00000496622 COX6CP09669 75 aa4.21□□□□□ -1.74
SSBP1-213ENST00000496622 LINC00269Q8N2A0 174 aa4.21□□□□□ -1.74
SSBP1-213ENST00000496622 ZNF625Q96I27 306 aaPredicted RBP4.21□□□□□ -1.74
SSBP1-213ENST00000496622 AMELXQ99217 191 aa4.21□□□□□ -1.74
SSBP1-213ENST00000496622 ICOSQ9Y6W8 199 aa4.21□□□□□ -1.74
SSBP1-213ENST00000496622 C16orf90A8MZG2 172 aa4.2□□□□□ -1.74
SSBP1-213ENST00000496622 MIFP14174 115 aa4.2□□□□□ -1.74
SSBP1-213ENST00000496622 C6orf99Q4VX62 202 aa4.2□□□□□ -1.74
SSBP1-213ENST00000496622 TRBV6-8A0A0A6YYG3 113 aa4.2□□□□□ -1.74
SSBP1-213ENST00000496622 UBE2AP49459 152 aa4.2□□□□□ -1.74
SSBP1-213ENST00000496622 LINC00242Q5T6M2 205 aa4.19□□□□□ -1.74
SSBP1-213ENST00000496622 LINC00612Q8N6U2 182 aa4.19□□□□□ -1.74
SSBP1-213ENST00000496622 CDC42SE2Q9NRR3 84 aa4.19□□□□□ -1.74
SSBP1-213ENST00000496622 PRO0255Q9UI72 69 aa4.19□□□□□ -1.74
SSBP1-213ENST00000496622 IGHV3-30-3P0DP02 117 aa4.19□□□□□ -1.74
SSBP1-213ENST00000496622 EGFEM1PQ0D2K5 195 aa4.19□□□□□ -1.74
SSBP1-213ENST00000496622 ATP11AUNQ6ZP68 121 aa4.19□□□□□ -1.74
SSBP1-213ENST00000496622 Q6ZTC4 211 aa4.19□□□□□ -1.74
SSBP1-213ENST00000496622 IGLV10-54A0A075B6I4 117 aa4.18□□□□□ -1.74
SSBP1-213ENST00000496622 TRAV22A0A0B4J277 110 aa4.18□□□□□ -1.74
SSBP1-213ENST00000496622 A0A0J9YWU9 116 aa4.18□□□□□ -1.74
SSBP1-213ENST00000496622 LRCOL1A6NCL2 159 aa4.18□□□□□ -1.74
SSBP1-213ENST00000496622 LINC00846Q9NV44 126 aa4.18□□□□□ -1.74
SSBP1-213ENST00000496622 SPART-AS1P0CW21 52 aa4.18□□□□□ -1.74
SSBP1-213ENST00000496622 NANOS2P60321 138 aaKnown RBP4.18□□□□□ -1.74
SSBP1-213ENST00000496622 DYNC2H1Q8NCM8 4307 aaKnown RBP4.18□□□□□ -1.74
SSBP1-213ENST00000496622 HUWE1Q7Z6Z7 4374 aaKnown RBP4.17□□□□□ -1.74
SSBP1-213ENST00000496622 DNAL4O96015 105 aa4.17□□□□□ -1.74
SSBP1-213ENST00000496622 NDUFA12Q9UI09 145 aa4.17□□□□□ -1.74
SSBP1-213ENST00000496622 K7EIL1 84 aa4.16□□□□□ -1.74
SSBP1-213ENST00000496622 MUSTN1Q8IVN3 82 aa4.16□□□□□ -1.74
SSBP1-213ENST00000496622 PRKDCP78527 4128 aaKnown RBP4.16□□□□□ -1.74
SSBP1-213ENST00000496622 TOMM7Q9P0U1 55 aa4.16□□□□□ -1.74
SSBP1-213ENST00000496622 DNAH3Q8TD57 4116 aa4.16□□□□□ -1.74
SSBP1-213ENST00000496622 HCG22E2RYF7 251 aa4.15□□□□□ -1.74
SSBP1-213ENST00000496622 BCE1O60756 84 aa4.15□□□□□ -1.74
SSBP1-213ENST00000496622 CXCL6P80162 114 aa4.15□□□□□ -1.75
SSBP1-213ENST00000496622 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.75
SSBP1-213ENST00000496622 A0A0J9YXY3 114 aa4.14□□□□□ -1.75
SSBP1-213ENST00000496622 SMIM1B2RUZ4 78 aa4.14□□□□□ -1.75
SSBP1-213ENST00000496622 LEPROTO15243 131 aa4.14□□□□□ -1.75
SSBP1-213ENST00000496622 ANGP03950 147 aaKnown RBP4.14□□□□□ -1.75
SSBP1-213ENST00000496622 Q75L30 129 aa4.14□□□□□ -1.75
SSBP1-213ENST00000496622 C22orf24Q9Y442 160 aa4.14□□□□□ -1.75
SSBP1-213ENST00000496622 hDV103S1A0JD37 113 aa4.14□□□□□ -1.75
SSBP1-213ENST00000496622 ENHOQ6UWT2 76 aa4.14□□□□□ -1.75
SSBP1-213ENST00000496622 KPRPQ5T749 579 aaPredicted RBP4.13□□□□□ -1.75
SSBP1-213ENST00000496622 PRAC1Q96KF2 57 aa4.13□□□□□ -1.75
SSBP1-213ENST00000496622 IGHV3OR16-9A0A0B4J2B5 98 aa4.13□□□□□ -1.75
SSBP1-213ENST00000496622 LINC00959A0A1B0GUT2 108 aa4.13□□□□□ -1.75
SSBP1-213ENST00000496622 PRR3P79522 188 aaKnown RBP4.13□□□□□ -1.75
SSBP1-213ENST00000496622 Q5VV11 94 aa4.13□□□□□ -1.75
SSBP1-213ENST00000496622 WFDC10BQ8IUB3 73 aa4.13□□□□□ -1.75
SSBP1-213ENST00000496622 Q9HAA7 133 aa4.13□□□□□ -1.75
SSBP1-213ENST00000496622 KLK12Q9UKR0 248 aa4.13□□□□□ -1.75
SSBP1-213ENST00000496622 DNAH1Q9P2D7 4330 aa4.12□□□□□ -1.75
SSBP1-213ENST00000496622 KIAA0087Q14695 138 aa4.12□□□□□ -1.75
SSBP1-213ENST00000496622 LITAFQ99732 161 aa4.12□□□□□ -1.75
SSBP1-213ENST00000496622 IGLV5-45A0A087WSX0 123 aa4.12□□□□□ -1.75
SSBP1-213ENST00000496622 DEFB131BA0A096LNP1 70 aa4.12□□□□□ -1.75
SSBP1-213ENST00000496622 IGHV6-1A0A0B4J1U7 121 aa4.12□□□□□ -1.75
SSBP1-213ENST00000496622 CHKB-CPT1BH3BT56 60 aa4.12□□□□□ -1.75
SSBP1-213ENST00000496622 FAM30AQ9NZY2 134 aa4.12□□□□□ -1.75
SSBP1-213ENST00000496622 ATP5EP2Q5VTU8 51 aa4.11□□□□□ -1.75
SSBP1-213ENST00000496622 C14orf132Q9NPU4 83 aa4.11□□□□□ -1.75
SSBP1-213ENST00000496622 TRAV10A0A0B4J240 114 aa4.11□□□□□ -1.75
SSBP1-213ENST00000496622 IGLV5-39A0A0G2JS06 123 aa4.11□□□□□ -1.75
SSBP1-213ENST00000496622 TRBV7-4A0A0J9YYF1 115 aa4.11□□□□□ -1.75
SSBP1-213ENST00000496622 LCE6AA0A183 80 aa4.11□□□□□ -1.75
SSBP1-213ENST00000496622 DNAH7Q8WXX0 4024 aa4.11□□□□□ -1.75
SSBP1-213ENST00000496622 DNAH9Q9NYC9 4486 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms