RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 MRPL51Q4U2R6 128 aaKnown RBP5.68□□□□□ -1.5
SMARCAL1-213ENST00000496037 PRNTQ86SH4 94 aa5.68□□□□□ -1.5
SMARCAL1-213ENST00000496037 SPANXCQ9NY87 97 aa5.68□□□□□ -1.5
SMARCAL1-213ENST00000496037 GVQW2A0A096LPI5 108 aaPredicted RBP5.67□□□□□ -1.5
SMARCAL1-213ENST00000496037 IGKV2D-26A0A0A0MRZ7 120 aa5.67□□□□□ -1.5
SMARCAL1-213ENST00000496037 CFC1BP0CG36 223 aa5.67□□□□□ -1.5
SMARCAL1-213ENST00000496037 CKS2P33552 79 aa5.67□□□□□ -1.5
SMARCAL1-213ENST00000496037 C6orf99Q4VX62 202 aa5.67□□□□□ -1.5
SMARCAL1-213ENST00000496037 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
SMARCAL1-213ENST00000496037 C20orf203Q8NBC4 194 aa5.67□□□□□ -1.5
SMARCAL1-213ENST00000496037 CARD19Q96LW7 228 aa5.67□□□□□ -1.5
SMARCAL1-213ENST00000496037 SPANXDQ9BXN6 97 aa5.67□□□□□ -1.5
SMARCAL1-213ENST00000496037 SMIM26A0A096LP01 95 aa5.66□□□□□ -1.5
SMARCAL1-213ENST00000496037 C8orf87E5RJ46 101 aa5.66□□□□□ -1.5
SMARCAL1-213ENST00000496037 ZC2HC1BQ5TFG8 222 aa5.66□□□□□ -1.5
SMARCAL1-213ENST00000496037 NTM-AS1Q6ZSK4 140 aa5.66□□□□□ -1.5
SMARCAL1-213ENST00000496037 RETNLBQ9BQ08 111 aa5.66□□□□□ -1.5
SMARCAL1-213ENST00000496037 TMEM126AQ9H061 195 aa5.66□□□□□ -1.5
SMARCAL1-213ENST00000496037 PYGO1Q9Y3Y4 419 aa5.66□□□□□ -1.5
SMARCAL1-213ENST00000496037 TRAV12-1A0A0B4J245 112 aa5.65□□□□□ -1.5
SMARCAL1-213ENST00000496037 MYMXA0A1B0GTQ4 84 aa5.65□□□□□ -1.5
SMARCAL1-213ENST00000496037 FABP5P3A8MUU1 101 aa5.65□□□□□ -1.5
SMARCAL1-213ENST00000496037 M0R381 172 aa5.65□□□□□ -1.5
SMARCAL1-213ENST00000496037 SNCGO76070 127 aa5.65□□□□□ -1.5
SMARCAL1-213ENST00000496037 NPYP01303 97 aa5.65□□□□□ -1.5
SMARCAL1-213ENST00000496037 IFITM1P13164 125 aa5.65□□□□□ -1.5
SMARCAL1-213ENST00000496037 HERVK_113P61574 105 aa5.65□□□□□ -1.5
SMARCAL1-213ENST00000496037 ZNF56Q15929 161 aa5.65□□□□□ -1.5
SMARCAL1-213ENST00000496037 LYZL1Q6UWQ5 148 aa5.65□□□□□ -1.5
SMARCAL1-213ENST00000496037 AMN1Q8IY45 258 aa5.65□□□□□ -1.5
SMARCAL1-213ENST00000496037 Q8N8P6 123 aa5.65□□□□□ -1.5
SMARCAL1-213ENST00000496037 IGLV4-60A0A075B6I1 120 aa5.64□□□□□ -1.51
SMARCAL1-213ENST00000496037 IGLV7-46A0A075B6I9 117 aa5.64□□□□□ -1.51
SMARCAL1-213ENST00000496037 IGHV6-1A0A0B4J1U7 121 aa5.64□□□□□ -1.51
SMARCAL1-213ENST00000496037 IGKV3D-20A0A0C4DH25 116 aa5.64□□□□□ -1.51
SMARCAL1-213ENST00000496037 A0A1W2PNN7 141 aa5.64□□□□□ -1.51
SMARCAL1-213ENST00000496037 PHF5AQ7RTV0 110 aaKnown RBP5.64□□□□□ -1.51
SMARCAL1-213ENST00000496037 IGKV3OR2-268A0A0C4DH90 116 aa5.63□□□□□ -1.51
SMARCAL1-213ENST00000496037 LOC107984640A0A0U1RRK4 108 aa5.63□□□□□ -1.51
SMARCAL1-213ENST00000496037 A0A1B0GUV1 79 aa5.63□□□□□ -1.51
SMARCAL1-213ENST00000496037 SCGB1C2P0DMR2 95 aa5.63□□□□□ -1.51
SMARCAL1-213ENST00000496037 C9orf116Q5BN46 136 aaPredicted RBP5.63□□□□□ -1.51
SMARCAL1-213ENST00000496037 CNFNQ9BYD5 112 aa5.63□□□□□ -1.51
SMARCAL1-213ENST00000496037 IGLV8-61A0A075B6I0 122 aa5.62□□□□□ -1.51
SMARCAL1-213ENST00000496037 F8VRH5 84 aa5.62□□□□□ -1.51
SMARCAL1-213ENST00000496037 SH2D1AO60880 128 aa5.62□□□□□ -1.51
SMARCAL1-213ENST00000496037 IGLC6P0CF74 106 aa5.62□□□□□ -1.51
SMARCAL1-213ENST00000496037 UBE2L6O14933 153 aa5.61□□□□□ -1.51
SMARCAL1-213ENST00000496037 ANKRD29Q8N6D5 301 aa5.61□□□□□ -1.51
SMARCAL1-213ENST00000496037 Q8NBF4 154 aa5.61□□□□□ -1.51
SMARCAL1-213ENST00000496037 LINC00526Q96FQ7 95 aa5.61□□□□□ -1.51
SMARCAL1-213ENST00000496037 TMEM243Q9BU79 118 aa5.61□□□□□ -1.51
SMARCAL1-213ENST00000496037 TTTY13Q9BZ97 58 aa5.61□□□□□ -1.51
SMARCAL1-213ENST00000496037 MRPL35Q9NZE8 188 aaKnown RBP5.61□□□□□ -1.51
SMARCAL1-213ENST00000496037 LOC107984156A0A0G2JMH3 177 aa5.6□□□□□ -1.51
SMARCAL1-213ENST00000496037 LINC01549A6NIU2 74 aa5.6□□□□□ -1.51
SMARCAL1-213ENST00000496037 K7EMI3 77 aa5.6□□□□□ -1.51
SMARCAL1-213ENST00000496037 CRIP1P50238 77 aa5.6□□□□□ -1.51
SMARCAL1-213ENST00000496037 SYCNQ0VAF6 134 aa5.6□□□□□ -1.51
SMARCAL1-213ENST00000496037 ARL17AQ8IVW1 177 aa5.6□□□□□ -1.51
SMARCAL1-213ENST00000496037 DHRS4-AS1Q9P1J3 65 aa5.6□□□□□ -1.51
SMARCAL1-213ENST00000496037 CCDC179H3BU77 68 aa5.59□□□□□ -1.51
SMARCAL1-213ENST00000496037 ASB16-AS1Q495Z4 193 aa5.59□□□□□ -1.51
SMARCAL1-213ENST00000496037 ORMDL2Q53FV1 153 aa5.59□□□□□ -1.51
SMARCAL1-213ENST00000496037 TYMSOSQ8TAI1 123 aa5.59□□□□□ -1.51
SMARCAL1-213ENST00000496037 SYNE2Q8WXH0 6885 aaKnown RBP5.58□□□□□ -1.52
SMARCAL1-213ENST00000496037 IGHV1-58A0A0C4DH39 117 aa5.58□□□□□ -1.52
SMARCAL1-213ENST00000496037 SLC25A20O43772 301 aa5.58□□□□□ -1.52
SMARCAL1-213ENST00000496037 TCL1BO95988 128 aa5.58□□□□□ -1.52
SMARCAL1-213ENST00000496037 CXCL6P80162 114 aa5.58□□□□□ -1.52
SMARCAL1-213ENST00000496037 LINC00337Q8N6G1 96 aa5.58□□□□□ -1.52
SMARCAL1-213ENST00000496037 RBM12B-AS1Q9P1G2 102 aa5.58□□□□□ -1.52
SMARCAL1-213ENST00000496037 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
SMARCAL1-213ENST00000496037 SSPOA2VEC9 5147 aa5.57□□□□□ -1.52
SMARCAL1-213ENST00000496037 ZNF815PA8K554 130 aa5.57□□□□□ -1.52
SMARCAL1-213ENST00000496037 MP68P56378 58 aa5.57□□□□□ -1.52
SMARCAL1-213ENST00000496037 MEIG1Q5JSS6 88 aa5.57□□□□□ -1.52
SMARCAL1-213ENST00000496037 TMSB15BA0A087X1C1 80 aa5.56□□□□□ -1.52
SMARCAL1-213ENST00000496037 NDUFC2O95298 119 aa5.56□□□□□ -1.52
SMARCAL1-213ENST00000496037 MT1HP80294 61 aa5.56□□□□□ -1.52
SMARCAL1-213ENST00000496037 ATXN8Q156A1 80 aa5.56□□□□□ -1.52
SMARCAL1-213ENST00000496037 KRTAP4-1Q9BYQ7 146 aa5.56□□□□□ -1.52
SMARCAL1-213ENST00000496037 IMUPQ9GZP8 106 aa5.56□□□□□ -1.52
SMARCAL1-213ENST00000496037 PRO1854Q9UHT4 67 aa5.56□□□□□ -1.52
SMARCAL1-213ENST00000496037 A0A0B4J2C4 111 aa5.55□□□□□ -1.52
SMARCAL1-213ENST00000496037 TRBV7-7A0A0K0K1E9 115 aa5.55□□□□□ -1.52
SMARCAL1-213ENST00000496037 FAM236DA0A1B0GTK5 79 aa5.55□□□□□ -1.52
SMARCAL1-213ENST00000496037 FAM236CP0DP71 79 aa5.55□□□□□ -1.52
SMARCAL1-213ENST00000496037 SMIM29Q86T20 159 aa5.55□□□□□ -1.52
SMARCAL1-213ENST00000496037 TOMM6Q96B49 74 aa5.55□□□□□ -1.52
SMARCAL1-213ENST00000496037 SCGB3A1Q96QR1 104 aa5.55□□□□□ -1.52
SMARCAL1-213ENST00000496037 USH2AO75445 5202 aa5.55□□□□□ -1.52
SMARCAL1-213ENST00000496037 A0A087X002 238 aa5.54□□□□□ -1.52
SMARCAL1-213ENST00000496037 TRBV10-2A0A0K0K1G8 114 aa5.54□□□□□ -1.52
SMARCAL1-213ENST00000496037 A0A1B0GX51 115 aa5.54□□□□□ -1.52
SMARCAL1-213ENST00000496037 C9JAW5 83 aa5.54□□□□□ -1.52
SMARCAL1-213ENST00000496037 PPP1R17O96001 155 aa5.54□□□□□ -1.52
SMARCAL1-213ENST00000496037 XCL1P47992 114 aa5.54□□□□□ -1.52
SMARCAL1-213ENST00000496037 KRTAP10-6P60371 365 aaPredicted RBP5.54□□□□□ -1.52
SMARCAL1-213ENST00000496037 UBE2BP63146 152 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms