RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 SFTA2Q6UW10 78 aa1.95□□□□□ -2.1
CCDC39-207ENST00000495817 C2orf82Q6UX34 121 aa1.95□□□□□ -2.1
CCDC39-207ENST00000495817 Q6ZSA8 131 aa1.95□□□□□ -2.1
CCDC39-207ENST00000495817 Q8N6K4 173 aa1.95□□□□□ -2.1
CCDC39-207ENST00000495817 C18orf32Q8TCD1 76 aa1.95□□□□□ -2.1
CCDC39-207ENST00000495817 C22orf24Q9Y442 160 aa1.95□□□□□ -2.1
CCDC39-207ENST00000495817 TRAV22A0A0B4J277 110 aa1.94□□□□□ -2.1
CCDC39-207ENST00000495817 TMEM30CPA0ZSE6 113 aa1.94□□□□□ -2.1
CCDC39-207ENST00000495817 F2Z2F3 143 aa1.94□□□□□ -2.1
CCDC39-207ENST00000495817 PDE6HQ13956 83 aa1.94□□□□□ -2.1
CCDC39-207ENST00000495817 FAM167A-AS1Q96KT0 104 aa1.94□□□□□ -2.1
CCDC39-207ENST00000495817 PRO1854Q9UHT4 67 aa1.94□□□□□ -2.1
CCDC39-207ENST00000495817 TLN2Q9Y4G6 2542 aa1.94□□□□□ -2.1
CCDC39-207ENST00000495817 TENM1Q9UKZ4 2725 aa1.94□□□□□ -2.1
CCDC39-207ENST00000495817 EPPK1P58107 5090 aaKnown RBP1.94□□□□□ -2.1
CCDC39-207ENST00000495817 MED12Q93074 2177 aa1.93□□□□□ -2.1
CCDC39-207ENST00000495817 ABCA4P78363 2273 aa1.93□□□□□ -2.1
CCDC39-207ENST00000495817 FREM3P0C091 2139 aa1.93□□□□□ -2.1
CCDC39-207ENST00000495817 TRBV7-3A0A075B6L6 115 aa1.93□□□□□ -2.1
CCDC39-207ENST00000495817 IGKV2-40A0A087WW87 121 aaPredicted RBP1.93□□□□□ -2.1
CCDC39-207ENST00000495817 A0A096LNT2 108 aa1.93□□□□□ -2.1
CCDC39-207ENST00000495817 KANTRA0A1W2PQU2 76 aa1.93□□□□□ -2.1
CCDC39-207ENST00000495817 DEFB108AA8MXU0 73 aa1.93□□□□□ -2.1
CCDC39-207ENST00000495817 IGKV2D-40P01614 121 aaPredicted RBP1.93□□□□□ -2.1
CCDC39-207ENST00000495817 KLKP1Q107X0 134 aa1.93□□□□□ -2.1
CCDC39-207ENST00000495817 SONP18583 2426 aaKnown RBP1.93□□□□□ -2.1
CCDC39-207ENST00000495817 TRBV10-1A0A0K0K1A3 114 aa1.92□□□□□ -2.1
CCDC39-207ENST00000495817 CLPSL1A2RUU4 121 aa1.92□□□□□ -2.1
CCDC39-207ENST00000495817 ANGP03950 147 aaKnown RBP1.92□□□□□ -2.1
CCDC39-207ENST00000495817 EDDM3BP56851 147 aa1.92□□□□□ -2.1
CCDC39-207ENST00000495817 C1orf137Q5JT78 98 aa1.92□□□□□ -2.1
CCDC39-207ENST00000495817 C10orf128Q5T292 105 aa1.92□□□□□ -2.1
CCDC39-207ENST00000495817 LINC01600Q96MT4 127 aa1.92□□□□□ -2.1
CCDC39-207ENST00000495817 CCL19Q99731 98 aa1.92□□□□□ -2.1
CCDC39-207ENST00000495817 PROK2Q9HC23 129 aa1.92□□□□□ -2.1
CCDC39-207ENST00000495817 INTS1Q8N201 2190 aaKnown RBP1.92□□□□□ -2.1
CCDC39-207ENST00000495817 TGP01266 2768 aa1.92□□□□□ -2.1
CCDC39-207ENST00000495817 IGKV3-7A0A075B6H7 116 aa1.91□□□□□ -2.1
CCDC39-207ENST00000495817 TRAV23DV6A0A075B6W5 121 aa1.91□□□□□ -2.1
CCDC39-207ENST00000495817 C7orf77A4D0Y5 90 aa1.91□□□□□ -2.1
CCDC39-207ENST00000495817 UMAD1C9J7I0 102 aa1.91□□□□□ -2.1
CCDC39-207ENST00000495817 CHKB-CPT1BH3BT56 60 aa1.91□□□□□ -2.1
CCDC39-207ENST00000495817 NBEAL2Q6ZNJ1 2754 aa1.9□□□□□ -2.1
CCDC39-207ENST00000495817 RYR2Q92736 4967 aa1.9□□□□□ -2.11
CCDC39-207ENST00000495817 TRBV25-1A0A075B6N4 114 aa1.9□□□□□ -2.11
CCDC39-207ENST00000495817 NUPR2A6NF83 97 aa1.9□□□□□ -2.11
CCDC39-207ENST00000495817 F8WEM9 126 aa1.9□□□□□ -2.11
CCDC39-207ENST00000495817 ARL14EPLP0DKL9 152 aa1.9□□□□□ -2.11
CCDC39-207ENST00000495817 CNBPP62633 177 aaKnown RBP1.9□□□□□ -2.11
CCDC39-207ENST00000495817 TMEM170BQ5T4T1 132 aa1.9□□□□□ -2.11
CCDC39-207ENST00000495817 ZNF818PQ6ZRF7 136 aa1.9□□□□□ -2.11
CCDC39-207ENST00000495817 NDUFA4L2Q9NRX3 87 aa1.9□□□□□ -2.11
CCDC39-207ENST00000495817 CNTRLQ7Z7A1 2325 aa1.9□□□□□ -2.11
CCDC39-207ENST00000495817 BIRC6Q9NR09 4857 aa1.9□□□□□ -2.11
CCDC39-207ENST00000495817 PKD1L1Q8TDX9 2849 aa1.9□□□□□ -2.11
CCDC39-207ENST00000495817 A0A087WWC5 75 aa1.89□□□□□ -2.11
CCDC39-207ENST00000495817 TRBV6-7A0A0A0MS04 114 aa1.89□□□□□ -2.11
CCDC39-207ENST00000495817 TRBV6-8A0A0A6YYG3 113 aa1.89□□□□□ -2.11
CCDC39-207ENST00000495817 IGHV3-33P01772 117 aa1.89□□□□□ -2.11
CCDC39-207ENST00000495817 ZNF56Q15929 161 aa1.89□□□□□ -2.11
CCDC39-207ENST00000495817 LINC00643Q86TS7 51 aa1.89□□□□□ -2.11
CCDC39-207ENST00000495817 NDUFA11Q86Y39 141 aa1.89□□□□□ -2.11
CCDC39-207ENST00000495817 DMAC1Q96GE9 116 aa1.89□□□□□ -2.11
CCDC39-207ENST00000495817 CDC42SE2Q9NRR3 84 aa1.89□□□□□ -2.11
CCDC39-207ENST00000495817 MGAM2Q2M2H8 2515 aa1.89□□□□□ -2.11
CCDC39-207ENST00000495817 SACSQ9NZJ4 4579 aa1.88□□□□□ -2.11
CCDC39-207ENST00000495817 DYNC2H1Q8NCM8 4307 aaKnown RBP1.88□□□□□ -2.11
CCDC39-207ENST00000495817 HYDINQ4G0P3 5121 aa1.88□□□□□ -2.11
CCDC39-207ENST00000495817 IQCF6A8MYZ5 107 aa1.88□□□□□ -2.11
CCDC39-207ENST00000495817 HMGN4O00479 90 aa1.88□□□□□ -2.11
CCDC39-207ENST00000495817 ACYP1P07311 99 aa1.88□□□□□ -2.11
CCDC39-207ENST00000495817 COX6CP09669 75 aa1.88□□□□□ -2.11
CCDC39-207ENST00000495817 SFTA3P0C7M3 94 aa1.88□□□□□ -2.11
CCDC39-207ENST00000495817 LYNX1P0DP58 116 aa1.88□□□□□ -2.11
CCDC39-207ENST00000495817 C20orf197Q8N268 126 aa1.88□□□□□ -2.11
CCDC39-207ENST00000495817 MRPL36Q9P0J6 103 aaKnown RBP1.88□□□□□ -2.11
CCDC39-207ENST00000495817 ORMDL1Q9P0S3 153 aa1.88□□□□□ -2.11
CCDC39-207ENST00000495817 VWFP04275 2813 aa1.88□□□□□ -2.11
CCDC39-207ENST00000495817 DNAH3Q8TD57 4116 aa1.88□□□□□ -2.11
CCDC39-207ENST00000495817 USF3Q68DE3 2245 aa1.87□□□□□ -2.11
CCDC39-207ENST00000495817 FAM223BA6NKX1 122 aa1.87□□□□□ -2.11
CCDC39-207ENST00000495817 BCE1O60756 84 aa1.87□□□□□ -2.11
CCDC39-207ENST00000495817 PPYP01298 95 aa1.87□□□□□ -2.11
CCDC39-207ENST00000495817 SMIM13P0DJ93 91 aa1.87□□□□□ -2.11
CCDC39-207ENST00000495817 SNURFQ9Y675 71 aa1.87□□□□□ -2.11
CCDC39-207ENST00000495817 DNAJC13O75165 2243 aa1.87□□□□□ -2.11
CCDC39-207ENST00000495817 DNAH9Q9NYC9 4486 aa1.87□□□□□ -2.11
CCDC39-207ENST00000495817 TMEM14DPA8MWL7 114 aa1.86□□□□□ -2.11
CCDC39-207ENST00000495817 IGLV3-1P01715 115 aa1.86□□□□□ -2.11
CCDC39-207ENST00000495817 HMGN2P05204 90 aaKnown RBP1.86□□□□□ -2.11
CCDC39-207ENST00000495817 SMIM11AP58511 58 aa1.86□□□□□ -2.11
CCDC39-207ENST00000495817 PSMG4Q5JS54 123 aa1.86□□□□□ -2.11
CCDC39-207ENST00000495817 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
CCDC39-207ENST00000495817 DYNLRB1Q9NP97 96 aa1.86□□□□□ -2.11
CCDC39-207ENST00000495817 PCLOQ9Y6V0 5065 aa1.86□□□□□ -2.11
CCDC39-207ENST00000495817 ALPK2Q86TB3 2170 aa1.86□□□□□ -2.11
CCDC39-207ENST00000495817 ABCA1O95477 2261 aa1.86□□□□□ -2.11
CCDC39-207ENST00000495817 A0A087WXM4 84 aa1.85□□□□□ -2.11
CCDC39-207ENST00000495817 A0A0J9YY99 117 aa1.85□□□□□ -2.11
CCDC39-207ENST00000495817 TRBV6-4A0A1B0GX49 114 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms