RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 SCXQ7RTU7 201 aa9.2□□□□□ -0.94
PTPRE-211ENST00000495530 VPS13BQ7Z7G8 4022 aa9.19□□□□□ -0.94
PTPRE-211ENST00000495530 C7orf33Q8WU49 177 aa9.19□□□□□ -0.94
PTPRE-211ENST00000495530 LINC00167Q96N53 147 aa9.19□□□□□ -0.94
PTPRE-211ENST00000495530 Q5VSD8 79 aa9.18□□□□□ -0.94
PTPRE-211ENST00000495530 LINC00337Q8N6G1 96 aa9.18□□□□□ -0.94
PTPRE-211ENST00000495530 NHP2Q9NX24 153 aaKnown RBP9.18□□□□□ -0.94
PTPRE-211ENST00000495530 IGLV1-50A0A075B6I6 118 aa9.17□□□□□ -0.94
PTPRE-211ENST00000495530 GAGE10A6NGK3 116 aa9.17□□□□□ -0.94
PTPRE-211ENST00000495530 UBE2BP63146 152 aa9.17□□□□□ -0.94
PTPRE-211ENST00000495530 PHF5AQ7RTV0 110 aaKnown RBP9.17□□□□□ -0.94
PTPRE-211ENST00000495530 PRO1854Q9UHT4 67 aa9.17□□□□□ -0.94
PTPRE-211ENST00000495530 TRBV10-3A0A0K0K1G6 114 aa9.16□□□□□ -0.94
PTPRE-211ENST00000495530 A0A1B0GWB2 263 aa9.16□□□□□ -0.94
PTPRE-211ENST00000495530 IGLV6-57P01721 117 aa9.16□□□□□ -0.94
PTPRE-211ENST00000495530 RPL37AP8A6NKH3 93 aa9.15□□□□□ -0.94
PTPRE-211ENST00000495530 BATFQ16520 125 aa9.15□□□□□ -0.94
PTPRE-211ENST00000495530 XGP55808 180 aa9.14□□□□□ -0.95
PTPRE-211ENST00000495530 KCNQ1DNQ9H478 68 aa9.14□□□□□ -0.95
PTPRE-211ENST00000495530 RPL13AP40429 203 aaKnown RBP9.13□□□□□ -0.95
PTPRE-211ENST00000495530 PRYO14603 147 aa9.12□□□□□ -0.95
PTPRE-211ENST00000495530 TRAV23DV6A0A075B6W5 121 aa9.11□□□□□ -0.95
PTPRE-211ENST00000495530 Q1RN00 199 aa9.11□□□□□ -0.95
PTPRE-211ENST00000495530 HAMPP81172 84 aa9.1□□□□□ -0.95
PTPRE-211ENST00000495530 REG3GQ6UW15 175 aa9.1□□□□□ -0.95
PTPRE-211ENST00000495530 SNHG12Q9BXW3 62 aa9.1□□□□□ -0.95
PTPRE-211ENST00000495530 H7C2G1 150 aa9.09□□□□□ -0.95
PTPRE-211ENST00000495530 K7ERJ3 54 aa9.09□□□□□ -0.95
PTPRE-211ENST00000495530 ZNF73O43830 326 aaPredicted RBP9.09□□□□□ -0.95
PTPRE-211ENST00000495530 VAMP3Q15836 100 aa9.09□□□□□ -0.95
PTPRE-211ENST00000495530 SMIM11BQ8TCY0 68 aa9.09□□□□□ -0.95
PTPRE-211ENST00000495530 RPL28P46779 137 aaKnown RBP9.08□□□□□ -0.96
PTPRE-211ENST00000495530 DNAH8Q96JB1 4490 aa9.07□□□□□ -0.96
PTPRE-211ENST00000495530 COL5A1-AS1Q5SY13 56 aa9.07□□□□□ -0.96
PTPRE-211ENST00000495530 DIRC1Q969H9 104 aa9.07□□□□□ -0.96
PTPRE-211ENST00000495530 PSORS1C2Q9UIG4 136 aa9.07□□□□□ -0.96
PTPRE-211ENST00000495530 TRBV7-6A0A0J9YX20 115 aa9.06□□□□□ -0.96
PTPRE-211ENST00000495530 ETDCA0A1B0GVM5 59 aa9.06□□□□□ -0.96
PTPRE-211ENST00000495530 COX6CP09669 75 aa9.06□□□□□ -0.96
PTPRE-211ENST00000495530 SPRR1AP35321 89 aa9.06□□□□□ -0.96
PTPRE-211ENST00000495530 BCE1O60756 84 aa9.05□□□□□ -0.96
PTPRE-211ENST00000495530 PSMB2P49721 201 aa9.05□□□□□ -0.96
PTPRE-211ENST00000495530 C6orf99Q4VX62 202 aa9.05□□□□□ -0.96
PTPRE-211ENST00000495530 KRTAP11-1Q8IUC1 163 aa9.05□□□□□ -0.96
PTPRE-211ENST00000495530 KRTAP29-1A8MX34 341 aaPredicted RBP9.04□□□□□ -0.96
PTPRE-211ENST00000495530 TSPAN13O95857 204 aa9.04□□□□□ -0.96
PTPRE-211ENST00000495530 SMR3BP02814 79 aaPredicted RBP9.04□□□□□ -0.96
PTPRE-211ENST00000495530 C1orf137Q5JT78 98 aa9.04□□□□□ -0.96
PTPRE-211ENST00000495530 RNF213Q63HN8 5207 aa9.04□□□□□ -0.96
PTPRE-211ENST00000495530 H0YGX0 51 aa9.03□□□□□ -0.96
PTPRE-211ENST00000495530 FAM229AH3BQW9 127 aa9.03□□□□□ -0.96
PTPRE-211ENST00000495530 FAM19A1Q7Z5A9 133 aa9.03□□□□□ -0.96
PTPRE-211ENST00000495530 KRTAP4-16G5E9R7 235 aaPredicted RBP9.02□□□□□ -0.97
PTPRE-211ENST00000495530 H0Y9J4 135 aa9.02□□□□□ -0.97
PTPRE-211ENST00000495530 SNCGO76070 127 aa9.02□□□□□ -0.97
PTPRE-211ENST00000495530 COX7BP24311 80 aa9.02□□□□□ -0.97
PTPRE-211ENST00000495530 UBE2AP49459 152 aa9.02□□□□□ -0.97
PTPRE-211ENST00000495530 RPL37AP61513 92 aaKnown RBP9.02□□□□□ -0.97
PTPRE-211ENST00000495530 B5MCH6 92 aa9.01□□□□□ -0.97
PTPRE-211ENST00000495530 SCGB1C2P0DMR2 95 aa9.01□□□□□ -0.97
PTPRE-211ENST00000495530 C9orf118A6NHY6 69 aa9□□□□□ -0.97
PTPRE-211ENST00000495530 TAX1BP3O14907 124 aa9□□□□□ -0.97
PTPRE-211ENST00000495530 PLA2G1BP04054 148 aaKnown RBP9□□□□□ -0.97
PTPRE-211ENST00000495530 ELOF1P60002 83 aaKnown RBP9□□□□□ -0.97
PTPRE-211ENST00000495530 LYRM7Q5U5X0 104 aa9□□□□□ -0.97
PTPRE-211ENST00000495530 Q6ZRX8 168 aa9□□□□□ -0.97
PTPRE-211ENST00000495530 TRIAP1O43715 76 aa8.99□□□□□ -0.97
PTPRE-211ENST00000495530 SLC25A20O43772 301 aa8.99□□□□□ -0.97
PTPRE-211ENST00000495530 IGLV7-43P04211 117 aa8.99□□□□□ -0.97
PTPRE-211ENST00000495530 DHRS4-AS1Q9P1J3 65 aa8.99□□□□□ -0.97
PTPRE-211ENST00000495530 H3BUT2 72 aa8.97□□□□□ -0.97
PTPRE-211ENST00000495530 ZNF861PO60384 105 aa8.97□□□□□ -0.97
PTPRE-211ENST00000495530 PRLHP81277 87 aa8.95□□□□□ -0.98
PTPRE-211ENST00000495530 LINC00575Q6W349 94 aa8.95□□□□□ -0.98
PTPRE-211ENST00000495530 A0A1B0GX51 115 aa8.94□□□□□ -0.98
PTPRE-211ENST00000495530 KRTAP13-1Q8IUC0 172 aa8.94□□□□□ -0.98
PTPRE-211ENST00000495530 NAA38Q9BRA0 125 aaKnown RBP8.94□□□□□ -0.98
PTPRE-211ENST00000495530 HIGD2AQ9BW72 106 aa8.94□□□□□ -0.98
PTPRE-211ENST00000495530 TRBV20-1A0A075B6N2 111 aa8.93□□□□□ -0.98
PTPRE-211ENST00000495530 hADV29S1A0JD25 119 aa8.93□□□□□ -0.98
PTPRE-211ENST00000495530 FABP2P12104 132 aa8.93□□□□□ -0.98
PTPRE-211ENST00000495530 A0A1W2PPM0 123 aa8.92□□□□□ -0.98
PTPRE-211ENST00000495530 SMCR5Q8TEV8 140 aa8.92□□□□□ -0.98
PTPRE-211ENST00000495530 Q9BRP9 147 aa8.92□□□□□ -0.98
PTPRE-211ENST00000495530 XP32Q5T750 250 aa8.91□□□□□ -0.98
PTPRE-211ENST00000495530 SPINK6Q6UWN8 80 aa8.91□□□□□ -0.98
PTPRE-211ENST00000495530 ATXN8Q156A1 80 aa8.9□□□□□ -0.98
PTPRE-211ENST00000495530 CLEC2BQ92478 149 aa8.9□□□□□ -0.98
PTPRE-211ENST00000495530 LRP1Q07954 4544 aaKnown RBP8.9□□□□□ -0.99
PTPRE-211ENST00000495530 GHRHP01286 108 aa8.89□□□□□ -0.99
PTPRE-211ENST00000495530 LST1O00453 97 aa8.88□□□□□ -0.99
PTPRE-211ENST00000495530 DNAL4O96015 105 aa8.88□□□□□ -0.99
PTPRE-211ENST00000495530 TRACP01848 142 aa8.88□□□□□ -0.99
PTPRE-211ENST00000495530 KRTAP10-4P60372 401 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-211ENST00000495530 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-211ENST00000495530 FAM218AQ96MZ4 157 aa8.88□□□□□ -0.99
PTPRE-211ENST00000495530 ZNF706Q9Y5V0 76 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-211ENST00000495530 TCL1BO95988 128 aa8.87□□□□□ -0.99
PTPRE-211ENST00000495530 OCIAD2Q56VL3 154 aa8.87□□□□□ -0.99
PTPRE-211ENST00000495530 ERC2-IT1O76042 136 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms