RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 GHRHP01286 108 aa7.31□□□□□ -1.24
CHMP3-209ENST00000494623 BAHCC1Q9P281 2608 aa7.31□□□□□ -1.24
CHMP3-209ENST00000494623 SEC61GP60059 68 aa7.3□□□□□ -1.24
CHMP3-209ENST00000494623 C7orf33Q8WU49 177 aa7.3□□□□□ -1.24
CHMP3-209ENST00000494623 HAMPP81172 84 aa7.3□□□□□ -1.24
CHMP3-209ENST00000494623 ATP5EP2Q5VTU8 51 aa7.3□□□□□ -1.24
CHMP3-209ENST00000494623 PDE6GP18545 87 aa7.29□□□□□ -1.24
CHMP3-209ENST00000494623 C4orf26Q17RF5 130 aa7.29□□□□□ -1.24
CHMP3-209ENST00000494623 FAM168BA1KXE4 195 aa7.29□□□□□ -1.24
CHMP3-209ENST00000494623 RPL37AP8A6NKH3 93 aa7.29□□□□□ -1.24
CHMP3-209ENST00000494623 HRCT1Q6UXD1 115 aa7.29□□□□□ -1.24
CHMP3-209ENST00000494623 DEFB105AQ8NG35 78 aa7.29□□□□□ -1.24
CHMP3-209ENST00000494623 KCNQ1DNQ9H478 68 aa7.29□□□□□ -1.24
CHMP3-209ENST00000494623 HUWE1Q7Z6Z7 4374 aaKnown RBP7.28□□□□□ -1.24
CHMP3-209ENST00000494623 Q6ZVQ6 151 aa7.28□□□□□ -1.24
CHMP3-209ENST00000494623 UPK3BQ9BT76 320 aa7.28□□□□□ -1.24
CHMP3-209ENST00000494623 TRBV7-4A0A0J9YYF1 115 aa7.28□□□□□ -1.24
CHMP3-209ENST00000494623 LINC01547P58512 204 aaPredicted RBP7.27□□□□□ -1.25
CHMP3-209ENST00000494623 TLX1NBP0CAT3 122 aa7.27□□□□□ -1.25
CHMP3-209ENST00000494623 SERP2Q8N6R1 65 aa7.26□□□□□ -1.25
CHMP3-209ENST00000494623 RMI2Q96E14 147 aa7.26□□□□□ -1.25
CHMP3-209ENST00000494623 RPS28P62857 69 aaKnown RBP7.25□□□□□ -1.25
CHMP3-209ENST00000494623 MGAM2Q2M2H8 2515 aa7.24□□□□□ -1.25
CHMP3-209ENST00000494623 CRYGAP11844 174 aa7.24□□□□□ -1.25
CHMP3-209ENST00000494623 PLA2G2DQ9UNK4 145 aa7.24□□□□□ -1.25
CHMP3-209ENST00000494623 SCXQ7RTU7 201 aa7.23□□□□□ -1.25
CHMP3-209ENST00000494623 DNAH1Q9P2D7 4330 aa7.23□□□□□ -1.25
CHMP3-209ENST00000494623 IGLV1-50A0A075B6I6 118 aa7.23□□□□□ -1.25
CHMP3-209ENST00000494623 KRTAP7-1Q8IUC3 87 aa7.23□□□□□ -1.25
CHMP3-209ENST00000494623 Q8N377 158 aa7.22□□□□□ -1.25
CHMP3-209ENST00000494623 CYSTM1Q9H1C7 97 aa7.22□□□□□ -1.25
CHMP3-209ENST00000494623 ETDCA0A1B0GVM5 59 aa7.21□□□□□ -1.25
CHMP3-209ENST00000494623 PKIGQ9Y2B9 76 aa7.21□□□□□ -1.26
CHMP3-209ENST00000494623 Q5XG85 94 aa7.21□□□□□ -1.26
CHMP3-209ENST00000494623 Q6ZRX8 168 aa7.21□□□□□ -1.26
CHMP3-209ENST00000494623 Q9BRP9 147 aa7.21□□□□□ -1.26
CHMP3-209ENST00000494623 IGLV5-37A0A075B6J1 123 aa7.2□□□□□ -1.26
CHMP3-209ENST00000494623 CXCL6P80162 114 aa7.2□□□□□ -1.26
CHMP3-209ENST00000494623 MRPL55Q7Z7F7 128 aaKnown RBP7.2□□□□□ -1.26
CHMP3-209ENST00000494623 DHRS4-AS1Q9P1J3 65 aa7.2□□□□□ -1.26
CHMP3-209ENST00000494623 PRYO14603 147 aa7.2□□□□□ -1.26
CHMP3-209ENST00000494623 OXTP01178 125 aa7.2□□□□□ -1.26
CHMP3-209ENST00000494623 ST20-AS1Q8NBB2 130 aa7.2□□□□□ -1.26
CHMP3-209ENST00000494623 KRTAP4-16G5E9R7 235 aaPredicted RBP7.19□□□□□ -1.26
CHMP3-209ENST00000494623 KRTAP3-3Q9BYR6 98 aa7.19□□□□□ -1.26
CHMP3-209ENST00000494623 KRTAP3-2Q9BYR7 98 aa7.19□□□□□ -1.26
CHMP3-209ENST00000494623 KRTAP1-5Q9BYS1 174 aa7.19□□□□□ -1.26
CHMP3-209ENST00000494623 PRO0628Q9UI54 55 aa7.19□□□□□ -1.26
CHMP3-209ENST00000494623 C3orf84H3BNL1 204 aa7.18□□□□□ -1.26
CHMP3-209ENST00000494623 SPRR1AP35321 89 aa7.18□□□□□ -1.26
CHMP3-209ENST00000494623 LYSTQ99698 3801 aa7.18□□□□□ -1.26
CHMP3-209ENST00000494623 DNAH10Q8IVF4 4471 aa7.17□□□□□ -1.26
CHMP3-209ENST00000494623 PSCAO43653 123 aa7.17□□□□□ -1.26
CHMP3-209ENST00000494623 UBE2DNLQ8IWF7 75 aa7.17□□□□□ -1.26
CHMP3-209ENST00000494623 DPH3Q96FX2 82 aa7.17□□□□□ -1.26
CHMP3-209ENST00000494623 IGKV2-24A0A0C4DH68 120 aa7.17□□□□□ -1.26
CHMP3-209ENST00000494623 ERC2-IT1O76042 136 aa7.17□□□□□ -1.26
CHMP3-209ENST00000494623 UBE2BP63146 152 aa7.17□□□□□ -1.26
CHMP3-209ENST00000494623 NREPQ16612 68 aa7.17□□□□□ -1.26
CHMP3-209ENST00000494623 STAB2Q8WWQ8 2551 aa7.17□□□□□ -1.26
CHMP3-209ENST00000494623 COL7A1Q02388 2944 aa7.16□□□□□ -1.26
CHMP3-209ENST00000494623 V9GYY9 64 aa7.16□□□□□ -1.26
CHMP3-209ENST00000494623 IGLV5-48A0A075B6I7 105 aa7.15□□□□□ -1.26
CHMP3-209ENST00000494623 Q8N9L7 120 aa7.15□□□□□ -1.26
CHMP3-209ENST00000494623 A0A096LNI7 61 aa7.14□□□□□ -1.27
CHMP3-209ENST00000494623 REG3GQ6UW15 175 aa7.14□□□□□ -1.27
CHMP3-209ENST00000494623 LINC00336Q6ZUF6 198 aa7.14□□□□□ -1.27
CHMP3-209ENST00000494623 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.14□□□□□ -1.27
CHMP3-209ENST00000494623 C20orf197Q8N268 126 aa7.14□□□□□ -1.27
CHMP3-209ENST00000494623 APLNQ9ULZ1 77 aa7.14□□□□□ -1.27
CHMP3-209ENST00000494623 DNAH9Q9NYC9 4486 aa7.13□□□□□ -1.27
CHMP3-209ENST00000494623 TRAV7A0A075B6U4 112 aa7.13□□□□□ -1.27
CHMP3-209ENST00000494623 A0A1W2PNN7 141 aa7.13□□□□□ -1.27
CHMP3-209ENST00000494623 C1orf137Q5JT78 98 aa7.12□□□□□ -1.27
CHMP3-209ENST00000494623 A0A1W2PNM2 257 aa7.11□□□□□ -1.27
CHMP3-209ENST00000494623 C16orf90A8MZG2 172 aa7.11□□□□□ -1.27
CHMP3-209ENST00000494623 BPY2O14599 106 aa7.11□□□□□ -1.27
CHMP3-209ENST00000494623 BCE1O60756 84 aa7.11□□□□□ -1.27
CHMP3-209ENST00000494623 FUSP35637 526 aaKnown RBP eCLIP7.11□□□□□ -1.27
CHMP3-209ENST00000494623 MDFIQ99750 246 aa7.11□□□□□ -1.27
CHMP3-209ENST00000494623 FAM236DA0A1B0GTK5 79 aa7.11□□□□□ -1.27
CHMP3-209ENST00000494623 FAM236CP0DP71 79 aa7.11□□□□□ -1.27
CHMP3-209ENST00000494623 TENM2Q9NT68 2774 aa7.1□□□□□ -1.27
CHMP3-209ENST00000494623 TMEM258P61165 79 aa7.1□□□□□ -1.27
CHMP3-209ENST00000494623 CNBPP62633 177 aaKnown RBP7.1□□□□□ -1.27
CHMP3-209ENST00000494623 TNP2Q05952 138 aa7.1□□□□□ -1.27
CHMP3-209ENST00000494623 PRLHP81277 87 aa7.09□□□□□ -1.27
CHMP3-209ENST00000494623 IGKV4-1P06312 121 aa7.08□□□□□ -1.28
CHMP3-209ENST00000494623 CHTF8P0CG12 524 aa7.08□□□□□ -1.28
CHMP3-209ENST00000494623 A0A0G2JQZ4 141 aa7.07□□□□□ -1.28
CHMP3-209ENST00000494623 SMIM29Q86T20 159 aa7.07□□□□□ -1.28
CHMP3-209ENST00000494623 Q8NBF4 154 aa7.07□□□□□ -1.28
CHMP3-209ENST00000494623 B9D2Q9BPU9 175 aa7.07□□□□□ -1.28
CHMP3-209ENST00000494623 HIGD2AQ9BW72 106 aa7.07□□□□□ -1.28
CHMP3-209ENST00000494623 SNURFQ9Y675 71 aa7.07□□□□□ -1.28
CHMP3-209ENST00000494623 DNAH7Q8WXX0 4024 aa7.06□□□□□ -1.28
CHMP3-209ENST00000494623 PHF5AQ7RTV0 110 aaKnown RBP7.06□□□□□ -1.28
CHMP3-209ENST00000494623 PLECQ15149 4684 aaKnown RBP7.06□□□□□ -1.28
CHMP3-209ENST00000494623 C14orf177Q52M58 125 aa7.06□□□□□ -1.28
CHMP3-209ENST00000494623 C1orf195Q5TG92 126 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms