RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 C10orf25Q5T742 122 aa8.24□□□□□ -1.09
ERCC3-209ENST00000494464 UNQ6190/PRO20217Q6UXQ8 127 aa8.24□□□□□ -1.09
ERCC3-209ENST00000494464 IGKV2-28A0A075B6P5 120 aa8.23□□□□□ -1.09
ERCC3-209ENST00000494464 H3BMG7 143 aa8.23□□□□□ -1.09
ERCC3-209ENST00000494464 TCL1BO95988 128 aa8.23□□□□□ -1.09
ERCC3-209ENST00000494464 IGKV2D-28P01615 120 aa8.23□□□□□ -1.09
ERCC3-209ENST00000494464 COX6CP09669 75 aa8.23□□□□□ -1.09
ERCC3-209ENST00000494464 SCGB1C2P0DMR2 95 aa8.23□□□□□ -1.09
ERCC3-209ENST00000494464 RPL18AQ02543 176 aaKnown RBP8.22□□□□□ -1.09
ERCC3-209ENST00000494464 C6orf48Q9UBA6 75 aa8.22□□□□□ -1.09
ERCC3-209ENST00000494464 PRO0461Q9UI25 63 aa8.22□□□□□ -1.09
ERCC3-209ENST00000494464 TLX1NBP0CAT3 122 aa8.22□□□□□ -1.09
ERCC3-209ENST00000494464 LINC00337Q8N6G1 96 aa8.22□□□□□ -1.09
ERCC3-209ENST00000494464 ATXN8Q156A1 80 aa8.21□□□□□ -1.1
ERCC3-209ENST00000494464 C9orf116Q5BN46 136 aaPredicted RBP8.21□□□□□ -1.1
ERCC3-209ENST00000494464 A0A1W2PNN7 141 aa8.2□□□□□ -1.1
ERCC3-209ENST00000494464 RPL28P46779 137 aaKnown RBP8.2□□□□□ -1.1
ERCC3-209ENST00000494464 Q6ZRP5 223 aa8.19□□□□□ -1.1
ERCC3-209ENST00000494464 M0QXV9 152 aa8.18□□□□□ -1.1
ERCC3-209ENST00000494464 LST1O00453 97 aa8.18□□□□□ -1.1
ERCC3-209ENST00000494464 MT1HL1P0DM35 61 aa8.18□□□□□ -1.1
ERCC3-209ENST00000494464 SERTAD4-AS1Q5TG53 156 aa8.18□□□□□ -1.1
ERCC3-209ENST00000494464 LINC01600Q96MT4 127 aa8.17□□□□□ -1.1
ERCC3-209ENST00000494464 TNXBP22105 4242 aa8.15□□□□□ -1.1
ERCC3-209ENST00000494464 TRBV10-2A0A0K0K1G8 114 aa8.15□□□□□ -1.1
ERCC3-209ENST00000494464 NDUFC2-KCTD14E9PQ53 114 aa8.15□□□□□ -1.1
ERCC3-209ENST00000494464 SPINK6Q6UWN8 80 aa8.15□□□□□ -1.1
ERCC3-209ENST00000494464 HMCN2Q8NDA2 5059 aa8.15□□□□□ -1.1
ERCC3-209ENST00000494464 SMCPP49901 116 aaPredicted RBP8.14□□□□□ -1.11
ERCC3-209ENST00000494464 SMIM11BQ8TCY0 68 aa8.14□□□□□ -1.11
ERCC3-209ENST00000494464 TMEM126AQ9H061 195 aa8.14□□□□□ -1.11
ERCC3-209ENST00000494464 SLC25A20O43772 301 aa8.13□□□□□ -1.11
ERCC3-209ENST00000494464 OCIAD2Q56VL3 154 aa8.13□□□□□ -1.11
ERCC3-209ENST00000494464 PHF5AQ7RTV0 110 aaKnown RBP8.13□□□□□ -1.11
ERCC3-209ENST00000494464 MTURNQ8N3F0 131 aa8.13□□□□□ -1.11
ERCC3-209ENST00000494464 Q8NDZ9 215 aa8.13□□□□□ -1.11
ERCC3-209ENST00000494464 OR13C6PQ8NH95 151 aa8.13□□□□□ -1.11
ERCC3-209ENST00000494464 CLEC2BQ92478 149 aa8.13□□□□□ -1.11
ERCC3-209ENST00000494464 PSORS1C2Q9UIG4 136 aa8.13□□□□□ -1.11
ERCC3-209ENST00000494464 C9JAW5 83 aa8.12□□□□□ -1.11
ERCC3-209ENST00000494464 H0YGX0 51 aa8.12□□□□□ -1.11
ERCC3-209ENST00000494464 TRACP01848 142 aa8.12□□□□□ -1.11
ERCC3-209ENST00000494464 GAGE2EQ4V326 116 aa8.12□□□□□ -1.11
ERCC3-209ENST00000494464 GAGE2DQ9UEU5 116 aa8.12□□□□□ -1.11
ERCC3-209ENST00000494464 FAM168BA1KXE4 195 aa8.11□□□□□ -1.11
ERCC3-209ENST00000494464 H3BT86 120 aa8.11□□□□□ -1.11
ERCC3-209ENST00000494464 K7ERU9 68 aa8.11□□□□□ -1.11
ERCC3-209ENST00000494464 NCR3O14931 201 aa8.11□□□□□ -1.11
ERCC3-209ENST00000494464 REG3GQ6UW15 175 aa8.11□□□□□ -1.11
ERCC3-209ENST00000494464 FAM19A5Q7Z5A7 132 aaPredicted RBP8.1□□□□□ -1.11
ERCC3-209ENST00000494464 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
ERCC3-209ENST00000494464 VPREB1P12018 145 aa8.1□□□□□ -1.11
ERCC3-209ENST00000494464 ETDBQ3ZM63 59 aa8.1□□□□□ -1.11
ERCC3-209ENST00000494464 C9orf129Q5T035 196 aaKnown RBP8.1□□□□□ -1.11
ERCC3-209ENST00000494464 TEN1Q86WV5 123 aa8.1□□□□□ -1.11
ERCC3-209ENST00000494464 KRTAP7-1Q8IUC3 87 aa8.1□□□□□ -1.11
ERCC3-209ENST00000494464 ANKRD29Q8N6D5 301 aa8.1□□□□□ -1.11
ERCC3-209ENST00000494464 XAGE1AQ9HD64 81 aa8.1□□□□□ -1.11
ERCC3-209ENST00000494464 C1orf137Q5JT78 98 aa8.09□□□□□ -1.12
ERCC3-209ENST00000494464 S100A7L2Q5SY68 101 aa8.09□□□□□ -1.12
ERCC3-209ENST00000494464 FAM218AQ96MZ4 157 aa8.08□□□□□ -1.12
ERCC3-209ENST00000494464 PLA2G2DQ9UNK4 145 aa8.08□□□□□ -1.12
ERCC3-209ENST00000494464 A0A1B0GX51 115 aa8.07□□□□□ -1.12
ERCC3-209ENST00000494464 CBY1Q9Y3M2 126 aa8.07□□□□□ -1.12
ERCC3-209ENST00000494464 J3QR89 54 aa8.06□□□□□ -1.12
ERCC3-209ENST00000494464 M0R378 163 aa8.06□□□□□ -1.12
ERCC3-209ENST00000494464 IGLV7-43P04211 117 aa8.06□□□□□ -1.12
ERCC3-209ENST00000494464 KRTAP11-1Q8IUC1 163 aa8.06□□□□□ -1.12
ERCC3-209ENST00000494464 PPDPFLQ8WWR9 84 aa8.05□□□□□ -1.12
ERCC3-209ENST00000494464 IGLV5-37A0A075B6J1 123 aa8.04□□□□□ -1.12
ERCC3-209ENST00000494464 KRTAP10-8P60410 259 aa8.04□□□□□ -1.12
ERCC3-209ENST00000494464 UBE2BP63146 152 aa8.04□□□□□ -1.12
ERCC3-209ENST00000494464 TRAV23DV6A0A075B6W5 121 aa8.03□□□□□ -1.12
ERCC3-209ENST00000494464 TRBV10-3A0A0K0K1G6 114 aa8.03□□□□□ -1.12
ERCC3-209ENST00000494464 DNAL4O96015 105 aa8.03□□□□□ -1.12
ERCC3-209ENST00000494464 C6orf99Q4VX62 202 aa8.03□□□□□ -1.12
ERCC3-209ENST00000494464 DIRC1Q969H9 104 aa8.03□□□□□ -1.12
ERCC3-209ENST00000494464 LINC00167Q96N53 147 aa8.03□□□□□ -1.12
ERCC3-209ENST00000494464 TRBV7-6A0A0J9YX20 115 aa8.02□□□□□ -1.13
ERCC3-209ENST00000494464 H0Y9J4 135 aa8□□□□□ -1.13
ERCC3-209ENST00000494464 C22orf24Q9Y442 160 aa8□□□□□ -1.13
ERCC3-209ENST00000494464 ZNF73O43830 326 aaPredicted RBP7.99□□□□□ -1.13
ERCC3-209ENST00000494464 SNCGO76070 127 aa7.99□□□□□ -1.13
ERCC3-209ENST00000494464 NKAPP1Q8N9T2 125 aa7.99□□□□□ -1.13
ERCC3-209ENST00000494464 BAALC-AS2P0C853 105 aa7.98□□□□□ -1.13
ERCC3-209ENST00000494464 LINC00575Q6W349 94 aa7.98□□□□□ -1.13
ERCC3-209ENST00000494464 MRPL55Q7Z7F7 128 aaKnown RBP7.98□□□□□ -1.13
ERCC3-209ENST00000494464 ORMDL1Q9P0S3 153 aa7.97□□□□□ -1.13
ERCC3-209ENST00000494464 ELOF1P60002 83 aaKnown RBP7.97□□□□□ -1.13
ERCC3-209ENST00000494464 KCNQ1DNQ9H478 68 aa7.97□□□□□ -1.13
ERCC3-209ENST00000494464 TEX49A0A1B0GTD5 131 aa7.96□□□□□ -1.14
ERCC3-209ENST00000494464 COX7BP24311 80 aa7.96□□□□□ -1.14
ERCC3-209ENST00000494464 hADV29S1A0JD25 119 aa7.95□□□□□ -1.14
ERCC3-209ENST00000494464 PRYO14603 147 aa7.95□□□□□ -1.14
ERCC3-209ENST00000494464 ZNF861PO60384 105 aa7.95□□□□□ -1.14
ERCC3-209ENST00000494464 KRTAP1-4P0C5Y4 121 aa7.95□□□□□ -1.14
ERCC3-209ENST00000494464 IGLV1-50A0A075B6I6 118 aa7.94□□□□□ -1.14
ERCC3-209ENST00000494464 H3BQ85 93 aa7.94□□□□□ -1.14
ERCC3-209ENST00000494464 VPS25Q9BRG1 176 aa7.94□□□□□ -1.14
ERCC3-209ENST00000494464 KRTAP3-3Q9BYR6 98 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms