RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 TIMM17BO60830 172 aa12.91□□□□□ -0.34
HPS3-207ENST00000494327 DDTP30046 118 aa12.91□□□□□ -0.34
HPS3-207ENST00000494327 SOSTDC1Q6X4U4 206 aa12.91□□□□□ -0.34
HPS3-207ENST00000494327 UBR4Q5T4S7 5183 aa12.9□□□□□ -0.34
HPS3-207ENST00000494327 TRBV10-2A0A0K0K1G8 114 aa12.9□□□□□ -0.34
HPS3-207ENST00000494327 TSPAN13O95857 204 aa12.9□□□□□ -0.34
HPS3-207ENST00000494327 FAM229BQ4G0N7 80 aa12.9□□□□□ -0.34
HPS3-207ENST00000494327 KRTAP13-2Q52LG2 175 aa12.9□□□□□ -0.34
HPS3-207ENST00000494327 LINC00337Q8N6G1 96 aa12.9□□□□□ -0.34
HPS3-207ENST00000494327 PRO1933Q9H354 126 aa12.9□□□□□ -0.34
HPS3-207ENST00000494327 SPANXB1Q9NS25 103 aaPredicted RBP12.9□□□□□ -0.34
HPS3-207ENST00000494327 UQCR10Q9UDW1 63 aa12.9□□□□□ -0.34
HPS3-207ENST00000494327 EIF4EBP3O60516 100 aaPredicted RBP12.89□□□□□ -0.35
HPS3-207ENST00000494327 NDUFC2O95298 119 aa12.89□□□□□ -0.35
HPS3-207ENST00000494327 SPRR1AP35321 89 aa12.89□□□□□ -0.35
HPS3-207ENST00000494327 S100A7L2Q5SY68 101 aa12.89□□□□□ -0.35
HPS3-207ENST00000494327 LITAFQ99732 161 aa12.86□□□□□ -0.35
HPS3-207ENST00000494327 KRTAP4-16G5E9R7 235 aaPredicted RBP12.85□□□□□ -0.35
HPS3-207ENST00000494327 SMCR5Q8TEV8 140 aa12.85□□□□□ -0.35
HPS3-207ENST00000494327 HIGD1BQ9P298 99 aa12.85□□□□□ -0.35
HPS3-207ENST00000494327 TSTD3H0UI37 97 aa12.84□□□□□ -0.35
HPS3-207ENST00000494327 LINC00308Q8TCZ7 52 aa12.84□□□□□ -0.35
HPS3-207ENST00000494327 SPRR4Q96PI1 79 aa12.84□□□□□ -0.35
HPS3-207ENST00000494327 Q6ZVH6 145 aa12.83□□□□□ -0.36
HPS3-207ENST00000494327 SPANXDQ9BXN6 97 aa12.83□□□□□ -0.36
HPS3-207ENST00000494327 SPANXCQ9NY87 97 aa12.83□□□□□ -0.36
HPS3-207ENST00000494327 B5MCH6 92 aa12.82□□□□□ -0.36
HPS3-207ENST00000494327 IGLV6-57P01721 117 aa12.82□□□□□ -0.36
HPS3-207ENST00000494327 PRR4Q16378 134 aa12.82□□□□□ -0.36
HPS3-207ENST00000494327 C2orf91Q6ZV80 131 aa12.82□□□□□ -0.36
HPS3-207ENST00000494327 ZNF706Q9Y5V0 76 aaPredicted RBP12.82□□□□□ -0.36
HPS3-207ENST00000494327 LRP2P98164 4655 aa12.81□□□□□ -0.36
HPS3-207ENST00000494327 C3orf22Q8N5N4 141 aa12.8□□□□□ -0.36
HPS3-207ENST00000494327 TRAV23DV6A0A075B6W5 121 aa12.79□□□□□ -0.36
HPS3-207ENST00000494327 IFITM1P13164 125 aa12.79□□□□□ -0.36
HPS3-207ENST00000494327 LINC00304Q8N9R0 145 aa12.79□□□□□ -0.36
HPS3-207ENST00000494327 COPS9Q8WXC6 57 aa12.79□□□□□ -0.36
HPS3-207ENST00000494327 HIST1H4GQ99525 98 aa12.79□□□□□ -0.36
HPS3-207ENST00000494327 PPDPFQ9H3Y8 114 aa12.79□□□□□ -0.36
HPS3-207ENST00000494327 OR13C6PQ8NH95 151 aa12.78□□□□□ -0.36
HPS3-207ENST00000494327 MUSTN1Q8IVN3 82 aa12.76□□□□□ -0.37
HPS3-207ENST00000494327 ZNF73O43830 326 aaPredicted RBP12.75□□□□□ -0.37
HPS3-207ENST00000494327 ERC2-IT1O76042 136 aa12.75□□□□□ -0.37
HPS3-207ENST00000494327 TAL2Q16559 108 aa12.75□□□□□ -0.37
HPS3-207ENST00000494327 Q6ZRX8 168 aa12.75□□□□□ -0.37
HPS3-207ENST00000494327 Q9BRP9 147 aa12.75□□□□□ -0.37
HPS3-207ENST00000494327 GAGE2AQ6NT46 116 aa12.74□□□□□ -0.37
HPS3-207ENST00000494327 CBY1Q9Y3M2 126 aa12.72□□□□□ -0.37
HPS3-207ENST00000494327 HINT1P49773 126 aaPredicted RBP12.71□□□□□ -0.37
HPS3-207ENST00000494327 HSD52Q0P140 79 aa12.71□□□□□ -0.37
HPS3-207ENST00000494327 CEND1Q8N111 149 aa12.69□□□□□ -0.38
HPS3-207ENST00000494327 KRTAP3-3Q9BYR6 98 aa12.69□□□□□ -0.38
HPS3-207ENST00000494327 KRTAP3-2Q9BYR7 98 aa12.69□□□□□ -0.38
HPS3-207ENST00000494327 CTAG1AP78358 180 aa12.68□□□□□ -0.38
HPS3-207ENST00000494327 RETNLBQ9BQ08 111 aa12.68□□□□□ -0.38
HPS3-207ENST00000494327 LPAP08519 4548 aa12.67□□□□□ -0.38
HPS3-207ENST00000494327 LINC00483Q53H64 154 aa12.67□□□□□ -0.38
HPS3-207ENST00000494327 IGLV9-49A0A0B4J1Y8 123 aa12.65□□□□□ -0.38
HPS3-207ENST00000494327 A4D1N5 150 aa12.65□□□□□ -0.38
HPS3-207ENST00000494327 C4orf48Q5BLP8 95 aa12.65□□□□□ -0.38
HPS3-207ENST00000494327 Q8NBF4 154 aa12.65□□□□□ -0.38
HPS3-207ENST00000494327 TMEM238LA0A1B0GVL6 79 aa12.63□□□□□ -0.39
HPS3-207ENST00000494327 A6NJY4 79 aa12.63□□□□□ -0.39
HPS3-207ENST00000494327 SPAG11AQ6PDA7 123 aa12.63□□□□□ -0.39
HPS3-207ENST00000494327 ST20-AS1Q8NBB2 130 aa12.62□□□□□ -0.39
HPS3-207ENST00000494327 MOBPQ13875 183 aa12.61□□□□□ -0.39
HPS3-207ENST00000494327 C6orf99Q4VX62 202 aa12.61□□□□□ -0.39
HPS3-207ENST00000494327 A6NDN8 102 aa12.6□□□□□ -0.39
HPS3-207ENST00000494327 M0R143 59 aa12.6□□□□□ -0.39
HPS3-207ENST00000494327 FXYD2P54710 66 aa12.6□□□□□ -0.39
HPS3-207ENST00000494327 PCP4L1A6NKN8 68 aa12.59□□□□□ -0.39
HPS3-207ENST00000494327 COX7BP24311 80 aa12.59□□□□□ -0.39
HPS3-207ENST00000494327 BVES-AS1Q5T3Y7 98 aa12.59□□□□□ -0.39
HPS3-207ENST00000494327 TRAV13-2A0A0B4J235 113 aa12.57□□□□□ -0.4
HPS3-207ENST00000494327 DHRS4-AS1Q9P1J3 65 aa12.57□□□□□ -0.4
HPS3-207ENST00000494327 RNF213Q63HN8 5207 aa12.57□□□□□ -0.4
HPS3-207ENST00000494327 CFC1BP0CG36 223 aa12.56□□□□□ -0.4
HPS3-207ENST00000494327 CFC1P0CG37 223 aa12.56□□□□□ -0.4
HPS3-207ENST00000494327 ELOF1P60002 83 aaKnown RBP12.56□□□□□ -0.4
HPS3-207ENST00000494327 C9orf153Q5TBE3 101 aa12.55□□□□□ -0.4
HPS3-207ENST00000494327 SSBP3-AS1Q7Z2R9 100 aa12.55□□□□□ -0.4
HPS3-207ENST00000494327 RAB37Q96AX2 223 aa12.55□□□□□ -0.4
HPS3-207ENST00000494327 NHP2Q9NX24 153 aaKnown RBP12.54□□□□□ -0.4
HPS3-207ENST00000494327 A0A0B4J2C4 111 aa12.53□□□□□ -0.4
HPS3-207ENST00000494327 IGLV7-46A0A075B6I9 117 aa12.52□□□□□ -0.41
HPS3-207ENST00000494327 SPINK1P00995 79 aa12.52□□□□□ -0.41
HPS3-207ENST00000494327 BATFQ16520 125 aa12.5□□□□□ -0.41
HPS3-207ENST00000494327 PRO1854Q9UHT4 67 aa12.5□□□□□ -0.41
HPS3-207ENST00000494327 TRBV7-6A0A0J9YX20 115 aa12.49□□□□□ -0.41
HPS3-207ENST00000494327 A0A1B0GWB2 263 aa12.48□□□□□ -0.41
HPS3-207ENST00000494327 DEFB105AQ8NG35 78 aa12.48□□□□□ -0.41
HPS3-207ENST00000494327 SMIM11BQ8TCY0 68 aa12.47□□□□□ -0.41
HPS3-207ENST00000494327 SPRR1BP22528 89 aa12.46□□□□□ -0.41
HPS3-207ENST00000494327 K7ERJ3 54 aa12.45□□□□□ -0.42
HPS3-207ENST00000494327 LAMTOR3Q9UHA4 124 aa12.45□□□□□ -0.42
HPS3-207ENST00000494327 CDIP1Q9H305 208 aa12.44□□□□□ -0.42
HPS3-207ENST00000494327 H7C2G1 150 aa12.43□□□□□ -0.42
HPS3-207ENST00000494327 SNHG12Q9BXW3 62 aa12.43□□□□□ -0.42
HPS3-207ENST00000494327 TPRXLQ17RH7 258 aa12.42□□□□□ -0.42
HPS3-207ENST00000494327 Q1RN00 199 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms