RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 SSBP3-AS1Q7Z2R9 100 aa0.67□□□□□ -2.3
LMNB1-207ENST00000494185 PRO3102Q9H379 93 aa0.67□□□□□ -2.3
LMNB1-207ENST00000494185 ATP7AQ04656 1500 aa0.67□□□□□ -2.3
LMNB1-207ENST00000494185 DEPDC5O75140 1603 aa0.67□□□□□ -2.3
LMNB1-207ENST00000494185 NRXN3Q9Y4C0 1643 aa0.67□□□□□ -2.3
LMNB1-207ENST00000494185 CNTRLQ7Z7A1 2325 aa0.66□□□□□ -2.3
LMNB1-207ENST00000494185 C5P01031 1676 aa0.66□□□□□ -2.3
LMNB1-207ENST00000494185 LINC00158P58513 81 aa0.66□□□□□ -2.3
LMNB1-207ENST00000494185 COX17Q14061 63 aa0.66□□□□□ -2.3
LMNB1-207ENST00000494185 CDKN2A-AS1Q9UH64 79 aa0.66□□□□□ -2.3
LMNB1-207ENST00000494185 TENM1Q9UKZ4 2725 aa0.66□□□□□ -2.3
LMNB1-207ENST00000494185 KMT2BQ9UMN6 2715 aaPredicted RBP0.66□□□□□ -2.3
LMNB1-207ENST00000494185 TIAM2Q8IVF5 1701 aa0.66□□□□□ -2.3
LMNB1-207ENST00000494185 PARP4Q9UKK3 1724 aaKnown RBP0.66□□□□□ -2.3
LMNB1-207ENST00000494185 MROH2BQ7Z745 1585 aa0.66□□□□□ -2.3
LMNB1-207ENST00000494185 PLCH1Q4KWH8 1693 aa0.65□□□□□ -2.3
LMNB1-207ENST00000494185 URB1O60287 2271 aaKnown RBP0.65□□□□□ -2.31
LMNB1-207ENST00000494185 RPS27LQ71UM5 84 aaKnown RBP0.65□□□□□ -2.31
LMNB1-207ENST00000494185 TMEM167BQ9NRX6 74 aa0.65□□□□□ -2.31
LMNB1-207ENST00000494185 C3P01024 1663 aa0.65□□□□□ -2.31
LMNB1-207ENST00000494185 QSER1Q2KHR3 1735 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 ROS1P08922 2347 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 DEFB131BA0A096LNP1 70 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 LY6G6CO95867 125 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 RPL37P61927 97 aaKnown RBP0.64□□□□□ -2.31
LMNB1-207ENST00000494185 SPINK9Q5DT21 86 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 SMIM11BQ8TCY0 68 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 LINC00308Q8TCZ7 52 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 SSC5DA1L4H1 1573 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 SAMD9LQ8IVG5 1584 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 IQGAP1P46940 1657 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 BCORQ6W2J9 1755 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 REV3LO60673 3130 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 BPTFQ12830 3046 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 CACNA1EQ15878 2313 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 PLXNB2O15031 1838 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 LY75O60449 1722 aa0.64□□□□□ -2.31
LMNB1-207ENST00000494185 CNOT1A5YKK6 2376 aaKnown RBP0.63□□□□□ -2.31
LMNB1-207ENST00000494185 FAM208AQ9UK61 1670 aaKnown RBP0.63□□□□□ -2.31
LMNB1-207ENST00000494185 PDE4DIPQ5VU43 2346 aa0.63□□□□□ -2.31
LMNB1-207ENST00000494185 IAPPP10997 89 aa0.63□□□□□ -2.31
LMNB1-207ENST00000494185 PRB3Q04118 309 aaPredicted RBP0.63□□□□□ -2.31
LMNB1-207ENST00000494185 LELP1Q5T871 98 aa0.63□□□□□ -2.31
LMNB1-207ENST00000494185 Q8IZM0 81 aa0.63□□□□□ -2.31
LMNB1-207ENST00000494185 SMIM2Q9BVW6 85 aa0.63□□□□□ -2.31
LMNB1-207ENST00000494185 CNFNQ9BYD5 112 aa0.63□□□□□ -2.31
LMNB1-207ENST00000494185 PIEZO2Q9H5I5 2752 aa0.63□□□□□ -2.31
LMNB1-207ENST00000494185 CELSR2Q9HCU4 2923 aa0.63□□□□□ -2.31
LMNB1-207ENST00000494185 JMJD1CQ15652 2540 aa0.63□□□□□ -2.31
LMNB1-207ENST00000494185 DSPP15924 2871 aaKnown RBP0.63□□□□□ -2.31
LMNB1-207ENST00000494185 LRRC37A2A6NM11 1700 aa0.62□□□□□ -2.31
LMNB1-207ENST00000494185 C4AP0C0L4 1744 aa0.62□□□□□ -2.31
LMNB1-207ENST00000494185 NRAPQ86VF7 1730 aa0.62□□□□□ -2.31
LMNB1-207ENST00000494185 DDX60Q8IY21 1712 aaKnown RBP0.62□□□□□ -2.31
LMNB1-207ENST00000494185 TOGARAM1Q9Y4F4 1720 aa0.62□□□□□ -2.31
LMNB1-207ENST00000494185 I3L2K1 104 aa0.62□□□□□ -2.31
LMNB1-207ENST00000494185 LINC01590Q5TEZ4 76 aa0.62□□□□□ -2.31
LMNB1-207ENST00000494185 ARHGAP5-AS1Q96IT6 56 aa0.62□□□□□ -2.31
LMNB1-207ENST00000494185 C10orf95Q9H7T3 257 aa0.62□□□□□ -2.31
LMNB1-207ENST00000494185 PLCE1Q9P212 2302 aa0.62□□□□□ -2.31
LMNB1-207ENST00000494185 AHNAKQ09666 5890 aaKnown RBP0.62□□□□□ -2.31
LMNB1-207ENST00000494185 LYNX1G3V0Z9 82 aa0.61□□□□□ -2.31
LMNB1-207ENST00000494185 H0YAA0 97 aa0.61□□□□□ -2.31
LMNB1-207ENST00000494185 NDUFA1O15239 70 aa0.61□□□□□ -2.31
LMNB1-207ENST00000494185 POLR2KP53803 58 aaKnown RBP0.61□□□□□ -2.31
LMNB1-207ENST00000494185 DUOX1Q9NRD9 1551 aa0.61□□□□□ -2.31
LMNB1-207ENST00000494185 DDX60LQ5H9U9 1706 aaKnown RBP0.61□□□□□ -2.31
LMNB1-207ENST00000494185 DOPEY2Q9Y3R5 2298 aa0.61□□□□□ -2.31
LMNB1-207ENST00000494185 ASH1LQ9NR48 2969 aaKnown RBP0.6□□□□□ -2.31
LMNB1-207ENST00000494185 SPTY2D1-AS1A0A0U1RR47 76 aa0.6□□□□□ -2.31
LMNB1-207ENST00000494185 TTTY10Q9BZA0 68 aa0.6□□□□□ -2.31
LMNB1-207ENST00000494185 ANK2Q01484 3957 aa0.6□□□□□ -2.31
LMNB1-207ENST00000494185 FAM208BQ5VWN6 2430 aa0.59□□□□□ -2.31
LMNB1-207ENST00000494185 WNK2Q9Y3S1 2297 aa0.59□□□□□ -2.31
LMNB1-207ENST00000494185 C4BP0C0L5 1744 aa0.59□□□□□ -2.31
LMNB1-207ENST00000494185 K7EQZ3 153 aa0.59□□□□□ -2.31
LMNB1-207ENST00000494185 MRPL33O75394 65 aaKnown RBP0.59□□□□□ -2.31
LMNB1-207ENST00000494185 RPL38P63173 70 aaKnown RBP0.59□□□□□ -2.31
LMNB1-207ENST00000494185 COX6A2Q02221 97 aa0.59□□□□□ -2.31
LMNB1-207ENST00000494185 DEFB123Q8N688 67 aa0.59□□□□□ -2.31
LMNB1-207ENST00000494185 MRPL34Q9BQ48 92 aaKnown RBP0.59□□□□□ -2.31
LMNB1-207ENST00000494185 IGF2RP11717 2491 aa0.59□□□□□ -2.32
LMNB1-207ENST00000494185 PTPRQQ9UMZ3 2332 aa0.59□□□□□ -2.32
LMNB1-207ENST00000494185 VPS13DQ5THJ4 4388 aa0.58□□□□□ -2.32
LMNB1-207ENST00000494185 MUC5BQ9HC84 5762 aaPredicted RBP0.58□□□□□ -2.32
LMNB1-207ENST00000494185 A0A0D9SG42 100 aa0.58□□□□□ -2.32
LMNB1-207ENST00000494185 H3BSH0 61 aa0.58□□□□□ -2.32
LMNB1-207ENST00000494185 RPS27P42677 84 aaKnown RBP0.58□□□□□ -2.32
LMNB1-207ENST00000494185 RPL39P62891 51 aaKnown RBP0.58□□□□□ -2.32
LMNB1-207ENST00000494185 UBE2DNLQ8IWF7 75 aa0.58□□□□□ -2.32
LMNB1-207ENST00000494185 A0A0G2JMZ2 1700 aa0.58□□□□□ -2.32
LMNB1-207ENST00000494185 KNL1Q8NG31 2342 aa0.58□□□□□ -2.32
LMNB1-207ENST00000494185 PCNX1Q96RV3 2341 aa0.58□□□□□ -2.32
LMNB1-207ENST00000494185 DNAH11Q96DT5 4516 aa0.57□□□□□ -2.32
LMNB1-207ENST00000494185 PTPRZ1P23471 2315 aaPredicted RBP0.57□□□□□ -2.32
LMNB1-207ENST00000494185 IGLV5-48A0A075B6I7 105 aa0.57□□□□□ -2.32
LMNB1-207ENST00000494185 DEFB130BP0DP73 79 aa0.57□□□□□ -2.32
LMNB1-207ENST00000494185 DEFB130AP0DP74 79 aa0.57□□□□□ -2.32
LMNB1-207ENST00000494185 COX6B2Q6YFQ2 88 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms