RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 ATXN8Q156A1 80 aa4.47□□□□□ -1.69
FNDC3B-212ENST00000494000 UBE2DNLQ8IWF7 75 aa4.47□□□□□ -1.69
FNDC3B-212ENST00000494000 IGLV10-54A0A075B6I4 117 aa4.47□□□□□ -1.69
FNDC3B-212ENST00000494000 CFC1BP0CG36 223 aa4.47□□□□□ -1.69
FNDC3B-212ENST00000494000 CFC1P0CG37 223 aa4.47□□□□□ -1.69
FNDC3B-212ENST00000494000 C2orf82Q6UX34 121 aa4.47□□□□□ -1.69
FNDC3B-212ENST00000494000 MUSTN1Q8IVN3 82 aa4.47□□□□□ -1.69
FNDC3B-212ENST00000494000 SMCR5Q8TEV8 140 aa4.47□□□□□ -1.69
FNDC3B-212ENST00000494000 PRO1854Q9UHT4 67 aa4.47□□□□□ -1.69
FNDC3B-212ENST00000494000 GVQW2A0A096LPI5 108 aaPredicted RBP4.46□□□□□ -1.69
FNDC3B-212ENST00000494000 SPAG11BQ08648 103 aa4.46□□□□□ -1.69
FNDC3B-212ENST00000494000 Q8N3U1 123 aa4.46□□□□□ -1.69
FNDC3B-212ENST00000494000 NKAPP1Q8N9T2 125 aa4.46□□□□□ -1.7
FNDC3B-212ENST00000494000 TRBV30A0A0K0K1B3 111 aa4.45□□□□□ -1.7
FNDC3B-212ENST00000494000 KRTAP26-1Q6PEX3 210 aa4.45□□□□□ -1.7
FNDC3B-212ENST00000494000 LINC00308Q8TCZ7 52 aa4.45□□□□□ -1.7
FNDC3B-212ENST00000494000 IGKV2D-24A0A075B6R9 120 aa4.45□□□□□ -1.7
FNDC3B-212ENST00000494000 LINC00158P58513 81 aa4.45□□□□□ -1.7
FNDC3B-212ENST00000494000 PSPHP1O15172 72 aa4.44□□□□□ -1.7
FNDC3B-212ENST00000494000 ADAMTSL4-AS1Q5T5F5 129 aa4.44□□□□□ -1.7
FNDC3B-212ENST00000494000 SDIM1Q6ZPB5 146 aa4.44□□□□□ -1.7
FNDC3B-212ENST00000494000 LAMTOR3Q9UHA4 124 aa4.44□□□□□ -1.7
FNDC3B-212ENST00000494000 PHF5AQ7RTV0 110 aaKnown RBP4.43□□□□□ -1.7
FNDC3B-212ENST00000494000 MGAM2Q2M2H8 2515 aa4.43□□□□□ -1.7
FNDC3B-212ENST00000494000 TRAV13-2A0A0B4J235 113 aa4.43□□□□□ -1.7
FNDC3B-212ENST00000494000 C14orf177Q52M58 125 aa4.43□□□□□ -1.7
FNDC3B-212ENST00000494000 LCE2AQ5TA79 106 aaPredicted RBP4.43□□□□□ -1.7
FNDC3B-212ENST00000494000 Q6ZRP5 223 aa4.43□□□□□ -1.7
FNDC3B-212ENST00000494000 MIR7-3HGQ8N6C7 128 aa4.43□□□□□ -1.7
FNDC3B-212ENST00000494000 NOTCH1P46531 2555 aa4.43□□□□□ -1.7
FNDC3B-212ENST00000494000 NBEAL1Q6ZS30 2694 aa4.43□□□□□ -1.7
FNDC3B-212ENST00000494000 FUSP35637 526 aaKnown RBP eCLIP4.42□□□□□ -1.7
FNDC3B-212ENST00000494000 COX6CP09669 75 aa4.42□□□□□ -1.7
FNDC3B-212ENST00000494000 CAMK2N2Q96S95 79 aa4.42□□□□□ -1.7
FNDC3B-212ENST00000494000 HUWE1Q7Z6Z7 4374 aaKnown RBP4.42□□□□□ -1.7
FNDC3B-212ENST00000494000 C15orf56Q8N910 161 aa4.41□□□□□ -1.7
FNDC3B-212ENST00000494000 WWC2-AS2Q96NR7 200 aa4.41□□□□□ -1.7
FNDC3B-212ENST00000494000 RPL37AP8A6NKH3 93 aa4.41□□□□□ -1.7
FNDC3B-212ENST00000494000 H7C2G1 150 aa4.41□□□□□ -1.7
FNDC3B-212ENST00000494000 FAM229BQ4G0N7 80 aa4.41□□□□□ -1.7
FNDC3B-212ENST00000494000 TENM3Q9P273 2699 aa4.4□□□□□ -1.7
FNDC3B-212ENST00000494000 CCKP06307 115 aa4.4□□□□□ -1.7
FNDC3B-212ENST00000494000 SYCNQ0VAF6 134 aa4.4□□□□□ -1.7
FNDC3B-212ENST00000494000 Q1RN00 199 aa4.4□□□□□ -1.7
FNDC3B-212ENST00000494000 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.7
FNDC3B-212ENST00000494000 UNQ6190/PRO20217Q6UXQ8 127 aa4.4□□□□□ -1.7
FNDC3B-212ENST00000494000 CLEC2BQ92478 149 aa4.4□□□□□ -1.7
FNDC3B-212ENST00000494000 DIRC1Q969H9 104 aa4.4□□□□□ -1.7
FNDC3B-212ENST00000494000 NBDYA0A0U1RRE5 68 aa4.4□□□□□ -1.71
FNDC3B-212ENST00000494000 TLX1NBP0CAT3 122 aa4.4□□□□□ -1.71
FNDC3B-212ENST00000494000 C3orf84H3BNL1 204 aa4.39□□□□□ -1.71
FNDC3B-212ENST00000494000 PSCAO43653 123 aa4.39□□□□□ -1.71
FNDC3B-212ENST00000494000 UBE2BP63146 152 aa4.39□□□□□ -1.71
FNDC3B-212ENST00000494000 C7orf65Q6ZTY9 151 aa4.39□□□□□ -1.71
FNDC3B-212ENST00000494000 C6orf48Q9UBA6 75 aa4.39□□□□□ -1.71
FNDC3B-212ENST00000494000 DNAH9Q9NYC9 4486 aa4.38□□□□□ -1.71
FNDC3B-212ENST00000494000 HIGD2BQ4VC39 106 aa4.38□□□□□ -1.71
FNDC3B-212ENST00000494000 C10orf25Q5T742 122 aa4.38□□□□□ -1.71
FNDC3B-212ENST00000494000 A6NN06 94 aa4.37□□□□□ -1.71
FNDC3B-212ENST00000494000 H7BZZ5 65 aa4.37□□□□□ -1.71
FNDC3B-212ENST00000494000 RPL28P46779 137 aaKnown RBP4.37□□□□□ -1.71
FNDC3B-212ENST00000494000 LINC01547P58512 204 aaPredicted RBP4.37□□□□□ -1.71
FNDC3B-212ENST00000494000 H0YGX0 51 aa4.36□□□□□ -1.71
FNDC3B-212ENST00000494000 CNBPP62633 177 aaKnown RBP4.36□□□□□ -1.71
FNDC3B-212ENST00000494000 C9orf116Q5BN46 136 aaPredicted RBP4.36□□□□□ -1.71
FNDC3B-212ENST00000494000 C20orf197Q8N268 126 aa4.36□□□□□ -1.71
FNDC3B-212ENST00000494000 SPTSSBQ8NFR3 76 aa4.36□□□□□ -1.71
FNDC3B-212ENST00000494000 IGKV2-28A0A075B6P5 120 aa4.35□□□□□ -1.71
FNDC3B-212ENST00000494000 A0A087WVE0 104 aa4.35□□□□□ -1.71
FNDC3B-212ENST00000494000 IGKV2D-28P01615 120 aa4.35□□□□□ -1.71
FNDC3B-212ENST00000494000 CHTF8P0CG12 524 aa4.35□□□□□ -1.71
FNDC3B-212ENST00000494000 KRTAP16-1A8MUX0 517 aa4.35□□□□□ -1.71
FNDC3B-212ENST00000494000 KRTAP1-5Q9BYS1 174 aa4.35□□□□□ -1.71
FNDC3B-212ENST00000494000 DYNC2H1Q8NCM8 4307 aaKnown RBP4.34□□□□□ -1.71
FNDC3B-212ENST00000494000 IGKV3D-7A0A0C4DH55 119 aa4.34□□□□□ -1.72
FNDC3B-212ENST00000494000 Q6JHZ5 121 aa4.33□□□□□ -1.72
FNDC3B-212ENST00000494000 Q6ZR54 194 aa4.33□□□□□ -1.72
FNDC3B-212ENST00000494000 COL7A1Q02388 2944 aa4.33□□□□□ -1.72
FNDC3B-212ENST00000494000 IGLV5-37A0A075B6J1 123 aa4.33□□□□□ -1.72
FNDC3B-212ENST00000494000 CASC10Q5T4H9 136 aa4.33□□□□□ -1.72
FNDC3B-212ENST00000494000 Q6ZRN7 208 aaPredicted RBP4.33□□□□□ -1.72
FNDC3B-212ENST00000494000 SCXQ7RTU7 201 aa4.33□□□□□ -1.72
FNDC3B-212ENST00000494000 SMIM11BQ8TCY0 68 aa4.32□□□□□ -1.72
FNDC3B-212ENST00000494000 LRCOL1A6NCL2 159 aa4.32□□□□□ -1.72
FNDC3B-212ENST00000494000 H3BQ85 93 aa4.32□□□□□ -1.72
FNDC3B-212ENST00000494000 IGLV6-57P01721 117 aa4.32□□□□□ -1.72
FNDC3B-212ENST00000494000 C1orf134Q5TEV5 83 aa4.31□□□□□ -1.72
FNDC3B-212ENST00000494000 LINC00476Q8WZB0 136 aa4.31□□□□□ -1.72
FNDC3B-212ENST00000494000 C16orf90A8MZG2 172 aa4.31□□□□□ -1.72
FNDC3B-212ENST00000494000 SLPIP03973 132 aa4.31□□□□□ -1.72
FNDC3B-212ENST00000494000 XAGE1AQ9HD64 81 aa4.31□□□□□ -1.72
FNDC3B-212ENST00000494000 DHRS4-AS1Q9P1J3 65 aa4.31□□□□□ -1.72
FNDC3B-212ENST00000494000 NCR3O14931 201 aa4.3□□□□□ -1.72
FNDC3B-212ENST00000494000 C9orf163Q8N9P6 203 aa4.3□□□□□ -1.72
FNDC3B-212ENST00000494000 MEGF8Q7Z7M0 2845 aa4.3□□□□□ -1.72
FNDC3B-212ENST00000494000 IGLV5-52A0A0A0MRZ9 124 aa4.3□□□□□ -1.72
FNDC3B-212ENST00000494000 LY6G6CO95867 125 aa4.3□□□□□ -1.72
FNDC3B-212ENST00000494000 KLKP1Q107X0 134 aa4.3□□□□□ -1.72
FNDC3B-212ENST00000494000 STAB2Q8WWQ8 2551 aa4.3□□□□□ -1.72
FNDC3B-212ENST00000494000 DNHD1Q96M86 4753 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 360.8 ms