RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 SPRR1AP35321 89 aa7.93□□□□□ -1.14
VPS52-220ENST00000493674 VPS25Q9BRG1 176 aa7.93□□□□□ -1.14
VPS52-220ENST00000493674 FAM30AQ9NZY2 134 aa7.93□□□□□ -1.14
VPS52-220ENST00000493674 TRBV7-6A0A0J9YX20 115 aa7.92□□□□□ -1.14
VPS52-220ENST00000493674 GAGE10A6NGK3 116 aa7.92□□□□□ -1.14
VPS52-220ENST00000493674 KRTAP4-16G5E9R7 235 aaPredicted RBP7.92□□□□□ -1.14
VPS52-220ENST00000493674 FABP2P12104 132 aa7.92□□□□□ -1.14
VPS52-220ENST00000493674 PSMB2P49721 201 aa7.92□□□□□ -1.14
VPS52-220ENST00000493674 LYRM7Q5U5X0 104 aa7.92□□□□□ -1.14
VPS52-220ENST00000493674 PHF5AQ7RTV0 110 aaKnown RBP7.92□□□□□ -1.14
VPS52-220ENST00000493674 ZNF73O43830 326 aaPredicted RBP7.91□□□□□ -1.14
VPS52-220ENST00000493674 C6orf99Q4VX62 202 aa7.91□□□□□ -1.14
VPS52-220ENST00000493674 KRTAP11-1Q8IUC1 163 aa7.91□□□□□ -1.14
VPS52-220ENST00000493674 APOBP04114 4563 aaKnown RBP7.91□□□□□ -1.14
VPS52-220ENST00000493674 RPL37AP8A6NKH3 93 aa7.9□□□□□ -1.14
VPS52-220ENST00000493674 COX6CP09669 75 aa7.9□□□□□ -1.14
VPS52-220ENST00000493674 H0YGX0 51 aa7.89□□□□□ -1.15
VPS52-220ENST00000493674 K7EP34 96 aa7.89□□□□□ -1.15
VPS52-220ENST00000493674 TCL1BO95988 128 aa7.89□□□□□ -1.15
VPS52-220ENST00000493674 DIRC1Q969H9 104 aa7.89□□□□□ -1.15
VPS52-220ENST00000493674 ELOF1P60002 83 aaKnown RBP7.88□□□□□ -1.15
VPS52-220ENST00000493674 SCXQ7RTU7 201 aa7.88□□□□□ -1.15
VPS52-220ENST00000493674 CIRBP-AS1Q8TBR5 109 aa7.88□□□□□ -1.15
VPS52-220ENST00000493674 CLEC2BQ92478 149 aa7.88□□□□□ -1.15
VPS52-220ENST00000493674 FAM218AQ96MZ4 157 aa7.88□□□□□ -1.15
VPS52-220ENST00000493674 SPCS1Q9Y6A9 102 aa7.88□□□□□ -1.15
VPS52-220ENST00000493674 TRBV20-1A0A075B6N2 111 aa7.87□□□□□ -1.15
VPS52-220ENST00000493674 LST1O00453 97 aa7.87□□□□□ -1.15
VPS52-220ENST00000493674 REG3GQ6UW15 175 aa7.87□□□□□ -1.15
VPS52-220ENST00000493674 DPH3Q96FX2 82 aa7.87□□□□□ -1.15
VPS52-220ENST00000493674 KIAA1109Q2LD37 5005 aa7.87□□□□□ -1.15
VPS52-220ENST00000493674 SCGB1C2P0DMR2 95 aa7.86□□□□□ -1.15
VPS52-220ENST00000493674 LINC00528Q8N1L1 170 aa7.86□□□□□ -1.15
VPS52-220ENST00000493674 HERC2O95714 4834 aa7.85□□□□□ -1.15
VPS52-220ENST00000493674 B5MCH6 92 aa7.85□□□□□ -1.15
VPS52-220ENST00000493674 CDK2AP2O75956 126 aa7.85□□□□□ -1.15
VPS52-220ENST00000493674 GTF2H5Q6ZYL4 71 aa7.85□□□□□ -1.15
VPS52-220ENST00000493674 RYR1P21817 5038 aa7.85□□□□□ -1.15
VPS52-220ENST00000493674 HSPG2P98160 4391 aa7.85□□□□□ -1.15
VPS52-220ENST00000493674 A0A1B0GX51 115 aa7.84□□□□□ -1.15
VPS52-220ENST00000493674 TRACP01848 142 aa7.84□□□□□ -1.15
VPS52-220ENST00000493674 COX7BP24311 80 aa7.84□□□□□ -1.15
VPS52-220ENST00000493674 UBE2BP63146 152 aa7.84□□□□□ -1.15
VPS52-220ENST00000493674 ATXN8Q156A1 80 aa7.84□□□□□ -1.15
VPS52-220ENST00000493674 LINC00575Q6W349 94 aa7.84□□□□□ -1.15
VPS52-220ENST00000493674 Q6ZRX8 168 aa7.84□□□□□ -1.15
VPS52-220ENST00000493674 H0Y9J4 135 aa7.82□□□□□ -1.16
VPS52-220ENST00000493674 H3BMG7 143 aa7.82□□□□□ -1.16
VPS52-220ENST00000493674 SCGB1A1P11684 91 aa7.82□□□□□ -1.16
VPS52-220ENST00000493674 KRTAP13-1Q8IUC0 172 aa7.82□□□□□ -1.16
VPS52-220ENST00000493674 ETDCA0A1B0GVM5 59 aa7.81□□□□□ -1.16
VPS52-220ENST00000493674 BCE1O60756 84 aa7.81□□□□□ -1.16
VPS52-220ENST00000493674 INAFM2P0DMQ5 153 aa7.81□□□□□ -1.16
VPS52-220ENST00000493674 Q9BRP9 147 aa7.81□□□□□ -1.16
VPS52-220ENST00000493674 PRO0461Q9UI25 63 aa7.81□□□□□ -1.16
VPS52-220ENST00000493674 PSORS1C2Q9UIG4 136 aa7.81□□□□□ -1.16
VPS52-220ENST00000493674 XGP55808 180 aa7.8□□□□□ -1.16
VPS52-220ENST00000493674 SVIPQ8NHG7 77 aa7.8□□□□□ -1.16
VPS52-220ENST00000493674 LINC01600Q96MT4 127 aa7.8□□□□□ -1.16
VPS52-220ENST00000493674 HAMPP81172 84 aa7.79□□□□□ -1.16
VPS52-220ENST00000493674 SRRM2Q9UQ35 2752 aaKnown RBP7.79□□□□□ -1.16
VPS52-220ENST00000493674 hADV29S1A0JD25 119 aa7.78□□□□□ -1.16
VPS52-220ENST00000493674 SMCR5Q8TEV8 140 aa7.78□□□□□ -1.16
VPS52-220ENST00000493674 DHRS4-AS1Q9P1J3 65 aa7.78□□□□□ -1.16
VPS52-220ENST00000493674 FAM19A1Q7Z5A9 133 aa7.77□□□□□ -1.17
VPS52-220ENST00000493674 VPS13BQ7Z7G8 4022 aa7.76□□□□□ -1.17
VPS52-220ENST00000493674 C9JAW5 83 aa7.76□□□□□ -1.17
VPS52-220ENST00000493674 SLC25A20O43772 301 aa7.76□□□□□ -1.17
VPS52-220ENST00000493674 SMCPP49901 116 aaPredicted RBP7.76□□□□□ -1.17
VPS52-220ENST00000493674 PRLHP81277 87 aa7.76□□□□□ -1.17
VPS52-220ENST00000493674 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.75□□□□□ -1.17
VPS52-220ENST00000493674 H3BT86 120 aa7.74□□□□□ -1.17
VPS52-220ENST00000493674 ERC2-IT1O76042 136 aa7.74□□□□□ -1.17
VPS52-220ENST00000493674 SNCGO76070 127 aa7.74□□□□□ -1.17
VPS52-220ENST00000493674 DNAL4O96015 105 aa7.74□□□□□ -1.17
VPS52-220ENST00000493674 C1orf137Q5JT78 98 aa7.74□□□□□ -1.17
VPS52-220ENST00000493674 F8W1H4 67 aa7.73□□□□□ -1.17
VPS52-220ENST00000493674 Q6ZQY7 126 aa7.73□□□□□ -1.17
VPS52-220ENST00000493674 MTURNQ8N3F0 131 aa7.73□□□□□ -1.17
VPS52-220ENST00000493674 PKHD1L1Q86WI1 4243 aa7.72□□□□□ -1.17
VPS52-220ENST00000493674 IGLV5-48A0A075B6I7 105 aa7.72□□□□□ -1.17
VPS52-220ENST00000493674 IGLV7-43P04211 117 aa7.72□□□□□ -1.17
VPS52-220ENST00000493674 UBE2AP49459 152 aa7.72□□□□□ -1.17
VPS52-220ENST00000493674 LINC01547P58512 204 aaPredicted RBP7.72□□□□□ -1.17
VPS52-220ENST00000493674 ORMDL1Q9P0S3 153 aa7.72□□□□□ -1.17
VPS52-220ENST00000493674 FAT1Q14517 4588 aa7.72□□□□□ -1.17
VPS52-220ENST00000493674 ZNF861PO60384 105 aa7.71□□□□□ -1.18
VPS52-220ENST00000493674 ANKRD29Q8N6D5 301 aa7.71□□□□□ -1.18
VPS52-220ENST00000493674 A0A1B0GV72 72 aa7.7□□□□□ -1.18
VPS52-220ENST00000493674 BAALC-AS2P0C853 105 aa7.7□□□□□ -1.18
VPS52-220ENST00000493674 HIGD2AQ9BW72 106 aa7.7□□□□□ -1.18
VPS52-220ENST00000493674 H3BQ85 93 aa7.69□□□□□ -1.18
VPS52-220ENST00000493674 J3QR89 54 aa7.69□□□□□ -1.18
VPS52-220ENST00000493674 KRTAP10-4P60372 401 aaPredicted RBP7.69□□□□□ -1.18
VPS52-220ENST00000493674 Q8N1X5 172 aa7.69□□□□□ -1.18
VPS52-220ENST00000493674 PPDPFLQ8WWR9 84 aa7.69□□□□□ -1.18
VPS52-220ENST00000493674 ST20-AS1Q8NBB2 130 aa7.68□□□□□ -1.18
VPS52-220ENST00000493674 SIGMAR1Q99720 223 aa7.68□□□□□ -1.18
VPS52-220ENST00000493674 TMEM256-PLSCR3K7ERE1 68 aa7.67□□□□□ -1.18
VPS52-220ENST00000493674 SPRR1BP22528 89 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms