RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 ERC2-IT1O76042 136 aa3.81□□□□□ -1.8
CAB39-206ENST00000493540 HBDP02042 147 aa3.81□□□□□ -1.8
CAB39-206ENST00000493540 CFC1BP0CG36 223 aa3.81□□□□□ -1.8
CAB39-206ENST00000493540 CFC1P0CG37 223 aa3.81□□□□□ -1.8
CAB39-206ENST00000493540 CLLU1Q5K131 121 aa3.81□□□□□ -1.8
CAB39-206ENST00000493540 C10orf91Q5T1B1 145 aa3.81□□□□□ -1.8
CAB39-206ENST00000493540 Q6ZRX8 168 aa3.81□□□□□ -1.8
CAB39-206ENST00000493540 SSBP3-AS1Q7Z2R9 100 aa3.81□□□□□ -1.8
CAB39-206ENST00000493540 TRBV10-3A0A0K0K1G6 114 aa3.8□□□□□ -1.8
CAB39-206ENST00000493540 TRBV10-2A0A0K0K1G8 114 aa3.8□□□□□ -1.8
CAB39-206ENST00000493540 MOBPQ13875 183 aa3.8□□□□□ -1.8
CAB39-206ENST00000493540 UQCC3Q6UW78 93 aa3.8□□□□□ -1.8
CAB39-206ENST00000493540 TRAV12-1A0A0B4J245 112 aa3.79□□□□□ -1.8
CAB39-206ENST00000493540 TMEM218A2RU14 115 aa3.79□□□□□ -1.8
CAB39-206ENST00000493540 SEC11CQ9BY50 192 aa3.79□□□□□ -1.8
CAB39-206ENST00000493540 NDUFA12Q9UI09 145 aa3.79□□□□□ -1.8
CAB39-206ENST00000493540 NCR3O14931 201 aa3.78□□□□□ -1.8
CAB39-206ENST00000493540 IGLV6-57P01721 117 aa3.78□□□□□ -1.8
CAB39-206ENST00000493540 SMIM13P0DJ93 91 aa3.78□□□□□ -1.8
CAB39-206ENST00000493540 SPRR1BP22528 89 aa3.78□□□□□ -1.8
CAB39-206ENST00000493540 HERV-K104P63124 156 aa3.78□□□□□ -1.8
CAB39-206ENST00000493540 BOD1L2Q8IYS8 172 aa3.78□□□□□ -1.8
CAB39-206ENST00000493540 MIR7-3HGQ8N6C7 128 aa3.78□□□□□ -1.8
CAB39-206ENST00000493540 LITAFQ99732 161 aa3.78□□□□□ -1.8
CAB39-206ENST00000493540 SMCO4Q9NRQ5 59 aa3.78□□□□□ -1.8
CAB39-206ENST00000493540 ETDCA0A1B0GVM5 59 aa3.77□□□□□ -1.81
CAB39-206ENST00000493540 C5orf52A6NGY3 159 aa3.77□□□□□ -1.81
CAB39-206ENST00000493540 LINC00614P0C842 121 aa3.77□□□□□ -1.81
CAB39-206ENST00000493540 LINC00158P58513 81 aa3.77□□□□□ -1.81
CAB39-206ENST00000493540 TSPEAR-AS2P59090 65 aa3.77□□□□□ -1.81
CAB39-206ENST00000493540 TMEM170BQ5T4T1 132 aa3.77□□□□□ -1.81
CAB39-206ENST00000493540 NDUFC2O95298 119 aa3.76□□□□□ -1.81
CAB39-206ENST00000493540 RHEBQ15382 184 aa3.76□□□□□ -1.81
CAB39-206ENST00000493540 PMCHL1Q16048 86 aa3.76□□□□□ -1.81
CAB39-206ENST00000493540 BAGE3Q86Y29 109 aa3.76□□□□□ -1.81
CAB39-206ENST00000493540 CHTOPQ9Y3Y2 248 aaKnown RBP3.76□□□□□ -1.81
CAB39-206ENST00000493540 S100PP25815 95 aa3.75□□□□□ -1.81
CAB39-206ENST00000493540 IFITM2Q01629 132 aa3.75□□□□□ -1.81
CAB39-206ENST00000493540 FABP9Q0Z7S8 132 aa3.75□□□□□ -1.81
CAB39-206ENST00000493540 Q5XG85 94 aa3.75□□□□□ -1.81
CAB39-206ENST00000493540 YPEL4Q96NS1 127 aa3.75□□□□□ -1.81
CAB39-206ENST00000493540 SPANXB1Q9NS25 103 aaPredicted RBP3.75□□□□□ -1.81
CAB39-206ENST00000493540 DDTP30046 118 aa3.74□□□□□ -1.81
CAB39-206ENST00000493540 PCOTHQ58A44 107 aa3.74□□□□□ -1.81
CAB39-206ENST00000493540 NOTCH2NLQ7Z3S9 236 aa3.74□□□□□ -1.81
CAB39-206ENST00000493540 IFI27L1Q96BM0 104 aa3.74□□□□□ -1.81
CAB39-206ENST00000493540 A0A0U1RRA0 63 aa3.73□□□□□ -1.81
CAB39-206ENST00000493540 LINC00587B1AMM8 73 aa3.73□□□□□ -1.81
CAB39-206ENST00000493540 NDUFA6P56556 154 aa3.73□□□□□ -1.81
CAB39-206ENST00000493540 SOSTDC1Q6X4U4 206 aa3.73□□□□□ -1.81
CAB39-206ENST00000493540 CHCHD1Q96BP2 118 aaKnown RBP3.73□□□□□ -1.81
CAB39-206ENST00000493540 RPS10P5Q9NQ39 176 aa3.73□□□□□ -1.81
CAB39-206ENST00000493540 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
CAB39-206ENST00000493540 IGLV8-61A0A075B6I0 122 aa3.72□□□□□ -1.81
CAB39-206ENST00000493540 MYMXA0A1B0GTQ4 84 aa3.72□□□□□ -1.81
CAB39-206ENST00000493540 CD164Q04900 197 aa3.72□□□□□ -1.81
CAB39-206ENST00000493540 MEIG1Q5JSS6 88 aa3.72□□□□□ -1.81
CAB39-206ENST00000493540 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
CAB39-206ENST00000493540 TRAV23DV6A0A075B6W5 121 aa3.71□□□□□ -1.82
CAB39-206ENST00000493540 ZNF73O43830 326 aaPredicted RBP3.71□□□□□ -1.82
CAB39-206ENST00000493540 ST20-AS1Q8NBB2 130 aa3.71□□□□□ -1.82
CAB39-206ENST00000493540 LIMD2Q9BT23 127 aa3.71□□□□□ -1.82
CAB39-206ENST00000493540 MAP1LC3CQ9BXW4 147 aa3.71□□□□□ -1.82
CAB39-206ENST00000493540 TRAPPC1Q9Y5R8 145 aa3.71□□□□□ -1.82
CAB39-206ENST00000493540 LEPROTO15243 131 aa3.7□□□□□ -1.82
CAB39-206ENST00000493540 NMUP48645 174 aa3.7□□□□□ -1.82
CAB39-206ENST00000493540 RPL37P61927 97 aaKnown RBP3.7□□□□□ -1.82
CAB39-206ENST00000493540 JOSD1Q15040 202 aaPredicted RBP3.7□□□□□ -1.82
CAB39-206ENST00000493540 ADAMTSL4-AS1Q5T5F5 129 aa3.7□□□□□ -1.82
CAB39-206ENST00000493540 J3QQQ9 107 aa3.69□□□□□ -1.82
CAB39-206ENST00000493540 S100A12P80511 92 aa3.69□□□□□ -1.82
CAB39-206ENST00000493540 C9orf153Q5TBE3 101 aa3.69□□□□□ -1.82
CAB39-206ENST00000493540 PLNP26678 52 aa3.68□□□□□ -1.82
CAB39-206ENST00000493540 COMMD7Q86VX2 200 aa3.68□□□□□ -1.82
CAB39-206ENST00000493540 MACF1Q9UPN3 7388 aaKnown RBP3.68□□□□□ -1.82
CAB39-206ENST00000493540 IGLV5-48A0A075B6I7 105 aa3.67□□□□□ -1.82
CAB39-206ENST00000493540 A0A0J9YXY3 114 aa3.67□□□□□ -1.82
CAB39-206ENST00000493540 C9orf92A6NGG3 77 aa3.67□□□□□ -1.82
CAB39-206ENST00000493540 ATP6V1G1O75348 118 aa3.67□□□□□ -1.82
CAB39-206ENST00000493540 ELOF1P60002 83 aaKnown RBP3.67□□□□□ -1.82
CAB39-206ENST00000493540 C1orf195Q5TG92 126 aa3.67□□□□□ -1.82
CAB39-206ENST00000493540 DHRS4-AS1Q9P1J3 65 aa3.67□□□□□ -1.82
CAB39-206ENST00000493540 SLC25A34Q6PIV7 304 aa3.66□□□□□ -1.82
CAB39-206ENST00000493540 SPANXCQ9NY87 97 aa3.66□□□□□ -1.82
CAB39-206ENST00000493540 E9PLD3 99 aa3.65□□□□□ -1.83
CAB39-206ENST00000493540 S100A7L2Q5SY68 101 aa3.65□□□□□ -1.83
CAB39-206ENST00000493540 MIEN1Q9BRT3 115 aa3.65□□□□□ -1.83
CAB39-206ENST00000493540 TRBV7-6A0A0J9YX20 115 aa3.64□□□□□ -1.83
CAB39-206ENST00000493540 TIMM17BO60830 172 aa3.64□□□□□ -1.83
CAB39-206ENST00000493540 HSBP1O75506 76 aa3.64□□□□□ -1.83
CAB39-206ENST00000493540 DPM2O94777 84 aa3.64□□□□□ -1.83
CAB39-206ENST00000493540 SPANXDQ9BXN6 97 aa3.64□□□□□ -1.83
CAB39-206ENST00000493540 CBY1Q9Y3M2 126 aa3.64□□□□□ -1.83
CAB39-206ENST00000493540 SERF1AO75920 110 aa3.63□□□□□ -1.83
CAB39-206ENST00000493540 LEPROTL1O95214 131 aa3.63□□□□□ -1.83
CAB39-206ENST00000493540 SNAPINO95295 136 aa3.63□□□□□ -1.83
CAB39-206ENST00000493540 IGKCP01834 107 aa3.63□□□□□ -1.83
CAB39-206ENST00000493540 SVBPQ8N300 66 aa3.63□□□□□ -1.83
CAB39-206ENST00000493540 LINC00308Q8TCZ7 52 aa3.63□□□□□ -1.83
CAB39-206ENST00000493540 LGALS3P17931 250 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms