RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 IGLV5-39A0A0G2JS06 123 aa6.12□□□□□ -1.43
CSTF1-206ENST00000493039 TMEM223A0PJW6 202 aa6.12□□□□□ -1.43
CSTF1-206ENST00000493039 PLNP26678 52 aa6.12□□□□□ -1.43
CSTF1-206ENST00000493039 PHF5AQ7RTV0 110 aaKnown RBP6.12□□□□□ -1.43
CSTF1-206ENST00000493039 HIGD2BQ4VC39 106 aa6.11□□□□□ -1.43
CSTF1-206ENST00000493039 LCA10Q71F78 164 aa6.11□□□□□ -1.43
CSTF1-206ENST00000493039 GVQW2A0A096LPI5 108 aaPredicted RBP6.11□□□□□ -1.43
CSTF1-206ENST00000493039 TEX49A0A1B0GTD5 131 aa6.11□□□□□ -1.43
CSTF1-206ENST00000493039 FUSP35637 526 aaKnown RBP eCLIP6.11□□□□□ -1.43
CSTF1-206ENST00000493039 Q6ZVQ6 151 aa6.1□□□□□ -1.43
CSTF1-206ENST00000493039 ATP5EP56381 51 aaPredicted RBP6.1□□□□□ -1.43
CSTF1-206ENST00000493039 CIRBPQ14011 172 aaKnown RBP6.1□□□□□ -1.43
CSTF1-206ENST00000493039 Q8N814 137 aa6.1□□□□□ -1.43
CSTF1-206ENST00000493039 DYNC1H1Q14204 4646 aaKnown RBP6.09□□□□□ -1.43
CSTF1-206ENST00000493039 LRP1BQ9NZR2 4599 aa6.09□□□□□ -1.43
CSTF1-206ENST00000493039 RBM3P98179 157 aaKnown RBP6.09□□□□□ -1.43
CSTF1-206ENST00000493039 LINC00337Q8N6G1 96 aa6.09□□□□□ -1.43
CSTF1-206ENST00000493039 EPPK1P58107 5090 aaKnown RBP6.09□□□□□ -1.43
CSTF1-206ENST00000493039 IGKV2D-26A0A0A0MRZ7 120 aa6.09□□□□□ -1.44
CSTF1-206ENST00000493039 A0A1B0GVY2 172 aa6.09□□□□□ -1.44
CSTF1-206ENST00000493039 TSPEAR-AS2P59090 65 aa6.09□□□□□ -1.44
CSTF1-206ENST00000493039 KRTAP10-2P60368 255 aa6.09□□□□□ -1.44
CSTF1-206ENST00000493039 C10orf25Q5T742 122 aa6.09□□□□□ -1.44
CSTF1-206ENST00000493039 C2orf82Q6UX34 121 aa6.09□□□□□ -1.44
CSTF1-206ENST00000493039 SPAG11BQ08648 103 aa6.08□□□□□ -1.44
CSTF1-206ENST00000493039 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.07□□□□□ -1.44
CSTF1-206ENST00000493039 H7BZZ5 65 aa6.07□□□□□ -1.44
CSTF1-206ENST00000493039 Q8IZM0 81 aa6.07□□□□□ -1.44
CSTF1-206ENST00000493039 TOMM7Q9P0U1 55 aa6.07□□□□□ -1.44
CSTF1-206ENST00000493039 H0Y9J4 135 aa6.07□□□□□ -1.44
CSTF1-206ENST00000493039 LINC00313P59037 77 aa6.07□□□□□ -1.44
CSTF1-206ENST00000493039 UNQ6190/PRO20217Q6UXQ8 127 aa6.07□□□□□ -1.44
CSTF1-206ENST00000493039 Q75L30 129 aa6.07□□□□□ -1.44
CSTF1-206ENST00000493039 COX7B2Q8TF08 81 aa6.07□□□□□ -1.44
CSTF1-206ENST00000493039 HIST1H4GQ99525 98 aa6.07□□□□□ -1.44
CSTF1-206ENST00000493039 DNAH8Q96JB1 4490 aa6.06□□□□□ -1.44
CSTF1-206ENST00000493039 TRBV10-2A0A0K0K1G8 114 aa6.06□□□□□ -1.44
CSTF1-206ENST00000493039 CNBPP62633 177 aaKnown RBP6.06□□□□□ -1.44
CSTF1-206ENST00000493039 TTTY13Q9BZ97 58 aa6.06□□□□□ -1.44
CSTF1-206ENST00000493039 LEPROTO15243 131 aa6.05□□□□□ -1.44
CSTF1-206ENST00000493039 C14orf177Q52M58 125 aa6.05□□□□□ -1.44
CSTF1-206ENST00000493039 ZNF625Q96I27 306 aaPredicted RBP6.05□□□□□ -1.44
CSTF1-206ENST00000493039 SMCR5Q8TEV8 140 aa6.05□□□□□ -1.44
CSTF1-206ENST00000493039 MP68P56378 58 aa6.04□□□□□ -1.44
CSTF1-206ENST00000493039 SYCNQ0VAF6 134 aa6.04□□□□□ -1.44
CSTF1-206ENST00000493039 C9orf116Q5BN46 136 aaPredicted RBP6.04□□□□□ -1.44
CSTF1-206ENST00000493039 CAMK2N2Q96S95 79 aa6.04□□□□□ -1.44
CSTF1-206ENST00000493039 C6orf48Q9UBA6 75 aa6.04□□□□□ -1.44
CSTF1-206ENST00000493039 PRSS2P07478 247 aa6.03□□□□□ -1.44
CSTF1-206ENST00000493039 C9orf163Q8N9P6 203 aa6.03□□□□□ -1.44
CSTF1-206ENST00000493039 S100A7L2Q5SY68 101 aa6.03□□□□□ -1.44
CSTF1-206ENST00000493039 NDUFA12Q9UI09 145 aa6.03□□□□□ -1.44
CSTF1-206ENST00000493039 A0A0B4J2C4 111 aa6.02□□□□□ -1.45
CSTF1-206ENST00000493039 NDUFA1O15239 70 aa6.02□□□□□ -1.45
CSTF1-206ENST00000493039 MPLKIPQ8TAP9 179 aa6.02□□□□□ -1.45
CSTF1-206ENST00000493039 PLA2G1BP04054 148 aaKnown RBP6.02□□□□□ -1.45
CSTF1-206ENST00000493039 UBE2BP63146 152 aa6.02□□□□□ -1.45
CSTF1-206ENST00000493039 FAM30AQ9NZY2 134 aa6.02□□□□□ -1.45
CSTF1-206ENST00000493039 IGLV5-52A0A0A0MRZ9 124 aa6.01□□□□□ -1.45
CSTF1-206ENST00000493039 ATXN8Q156A1 80 aa6.01□□□□□ -1.45
CSTF1-206ENST00000493039 C7orf65Q6ZTY9 151 aa6.01□□□□□ -1.45
CSTF1-206ENST00000493039 DIRC1Q969H9 104 aa6.01□□□□□ -1.45
CSTF1-206ENST00000493039 APOBP04114 4563 aaKnown RBP6.01□□□□□ -1.45
CSTF1-206ENST00000493039 NKAPP1Q8N9T2 125 aa6.01□□□□□ -1.45
CSTF1-206ENST00000493039 TRBV30A0A0K0K1B3 111 aa6□□□□□ -1.45
CSTF1-206ENST00000493039 J3QL48 77 aa6□□□□□ -1.45
CSTF1-206ENST00000493039 SFTA2Q6UW10 78 aa6□□□□□ -1.45
CSTF1-206ENST00000493039 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.99□□□□□ -1.45
CSTF1-206ENST00000493039 PANO1I0J062 215 aa5.99□□□□□ -1.45
CSTF1-206ENST00000493039 KRTAP10-1P60331 282 aa5.99□□□□□ -1.45
CSTF1-206ENST00000493039 KLKP1Q107X0 134 aa5.99□□□□□ -1.45
CSTF1-206ENST00000493039 Q6ZRP5 223 aa5.99□□□□□ -1.45
CSTF1-206ENST00000493039 A0A0J9YXY3 114 aa5.98□□□□□ -1.45
CSTF1-206ENST00000493039 ZNF815PA8K554 130 aa5.98□□□□□ -1.45
CSTF1-206ENST00000493039 LITAFQ99732 161 aa5.98□□□□□ -1.45
CSTF1-206ENST00000493039 TRAV13-2A0A0B4J235 113 aa5.98□□□□□ -1.45
CSTF1-206ENST00000493039 NDUFC1O43677 76 aa5.98□□□□□ -1.45
CSTF1-206ENST00000493039 TLX1NBP0CAT3 122 aa5.98□□□□□ -1.45
CSTF1-206ENST00000493039 PRR3P79522 188 aaKnown RBP5.98□□□□□ -1.45
CSTF1-206ENST00000493039 ADAMTSL4-AS1Q5T5F5 129 aa5.98□□□□□ -1.45
CSTF1-206ENST00000493039 C20orf197Q8N268 126 aa5.98□□□□□ -1.45
CSTF1-206ENST00000493039 A0A096LNI7 61 aa5.97□□□□□ -1.45
CSTF1-206ENST00000493039 CHTF8P0CG12 524 aa5.97□□□□□ -1.45
CSTF1-206ENST00000493039 Q1T7F1 81 aa5.97□□□□□ -1.45
CSTF1-206ENST00000493039 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.97□□□□□ -1.45
CSTF1-206ENST00000493039 A6NN06 94 aa5.97□□□□□ -1.45
CSTF1-206ENST00000493039 EIF4EBP3O60516 100 aaPredicted RBP5.97□□□□□ -1.45
CSTF1-206ENST00000493039 FAM229BQ4G0N7 80 aa5.97□□□□□ -1.45
CSTF1-206ENST00000493039 C6orf99Q4VX62 202 aa5.97□□□□□ -1.45
CSTF1-206ENST00000493039 SOSTDC1Q6X4U4 206 aa5.97□□□□□ -1.45
CSTF1-206ENST00000493039 LINC01554Q52M75 96 aa5.96□□□□□ -1.46
CSTF1-206ENST00000493039 DAND5Q8N907 189 aa5.96□□□□□ -1.46
CSTF1-206ENST00000493039 COX17Q14061 63 aa5.95□□□□□ -1.46
CSTF1-206ENST00000493039 C9orf129Q5T035 196 aaKnown RBP5.95□□□□□ -1.46
CSTF1-206ENST00000493039 KRTAP7-1Q8IUC3 87 aa5.95□□□□□ -1.46
CSTF1-206ENST00000493039 KIAA1109Q2LD37 5005 aa5.95□□□□□ -1.46
CSTF1-206ENST00000493039 C16orf90A8MZG2 172 aa5.95□□□□□ -1.46
CSTF1-206ENST00000493039 Q6ZSA8 131 aa5.95□□□□□ -1.46
CSTF1-206ENST00000493039 XAGE1AQ9HD64 81 aa5.95□□□□□ -1.46
CSTF1-206ENST00000493039 IGKV2-24A0A0C4DH68 120 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms