RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 PRR34Q9NV39 138 aa10.08□□□□□ -0.8
TNFRSF1B-203ENST00000492361 DEFB116Q30KQ4 102 aa10.08□□□□□ -0.8
TNFRSF1B-203ENST00000492361 RMI2Q96E14 147 aa10.08□□□□□ -0.8
TNFRSF1B-203ENST00000492361 SERTAD4-AS1Q5TG53 156 aa10.08□□□□□ -0.8
TNFRSF1B-203ENST00000492361 BPY2O14599 106 aa10.07□□□□□ -0.8
TNFRSF1B-203ENST00000492361 EGFEM1PQ0D2K5 195 aa10.07□□□□□ -0.8
TNFRSF1B-203ENST00000492361 VPREB1P12018 145 aa10.06□□□□□ -0.8
TNFRSF1B-203ENST00000492361 KRTAP24-1Q3LI83 254 aa10.06□□□□□ -0.8
TNFRSF1B-203ENST00000492361 C15orf56Q8N910 161 aa10.06□□□□□ -0.8
TNFRSF1B-203ENST00000492361 OBSCN-AS1Q96MR7 158 aa10.06□□□□□ -0.8
TNFRSF1B-203ENST00000492361 ST20-AS1Q8NBB2 130 aa10.05□□□□□ -0.8
TNFRSF1B-203ENST00000492361 HIGD2AQ9BW72 106 aa10.05□□□□□ -0.8
TNFRSF1B-203ENST00000492361 UBE2DNLQ8IWF7 75 aa10.05□□□□□ -0.8
TNFRSF1B-203ENST00000492361 C7orf33Q8WU49 177 aa10.04□□□□□ -0.8
TNFRSF1B-203ENST00000492361 SVIPQ8NHG7 77 aa10.04□□□□□ -0.8
TNFRSF1B-203ENST00000492361 CSMD3Q7Z407 3707 aa10.03□□□□□ -0.8
TNFRSF1B-203ENST00000492361 TM2D3Q9BRN9 247 aa10.02□□□□□ -0.81
TNFRSF1B-203ENST00000492361 CRYGAP11844 174 aa10.02□□□□□ -0.81
TNFRSF1B-203ENST00000492361 ELOF1P60002 83 aaKnown RBP10□□□□□ -0.81
TNFRSF1B-203ENST00000492361 F8WEM9 126 aa10□□□□□ -0.81
TNFRSF1B-203ENST00000492361 PRR4Q16378 134 aa9.99□□□□□ -0.81
TNFRSF1B-203ENST00000492361 ATP5EP2Q5VTU8 51 aa9.99□□□□□ -0.81
TNFRSF1B-203ENST00000492361 HRCT1Q6UXD1 115 aa9.99□□□□□ -0.81
TNFRSF1B-203ENST00000492361 FAM30AQ9NZY2 134 aa9.98□□□□□ -0.81
TNFRSF1B-203ENST00000492361 FUSP35637 526 aaKnown RBP eCLIP9.98□□□□□ -0.81
TNFRSF1B-203ENST00000492361 PRLHP81277 87 aa9.98□□□□□ -0.81
TNFRSF1B-203ENST00000492361 LINC00167Q96N53 147 aa9.98□□□□□ -0.81
TNFRSF1B-203ENST00000492361 LINC00588Q9Y4M8 146 aa9.96□□□□□ -0.81
TNFRSF1B-203ENST00000492361 SRRM2Q9UQ35 2752 aaKnown RBP9.96□□□□□ -0.81
TNFRSF1B-203ENST00000492361 LRCOL1A6NCL2 159 aa9.96□□□□□ -0.81
TNFRSF1B-203ENST00000492361 FAM236DA0A1B0GTK5 79 aa9.96□□□□□ -0.82
TNFRSF1B-203ENST00000492361 FAM236CP0DP71 79 aa9.96□□□□□ -0.82
TNFRSF1B-203ENST00000492361 TMEM258P61165 79 aa9.95□□□□□ -0.82
TNFRSF1B-203ENST00000492361 C4orf26Q17RF5 130 aa9.95□□□□□ -0.82
TNFRSF1B-203ENST00000492361 PDE6GP18545 87 aa9.95□□□□□ -0.82
TNFRSF1B-203ENST00000492361 LINC00528Q8N1L1 170 aa9.94□□□□□ -0.82
TNFRSF1B-203ENST00000492361 LINC01556Q5JQF7 62 aa9.93□□□□□ -0.82
TNFRSF1B-203ENST00000492361 GVQW2A0A096LPI5 108 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF1B-203ENST00000492361 C1orf137Q5JT78 98 aa9.92□□□□□ -0.82
TNFRSF1B-203ENST00000492361 MPLKIPQ8TAP9 179 aa9.92□□□□□ -0.82
TNFRSF1B-203ENST00000492361 LOC110117498A0A087WWA1 95 aa9.92□□□□□ -0.82
TNFRSF1B-203ENST00000492361 ERC2-IT1O76042 136 aa9.91□□□□□ -0.82
TNFRSF1B-203ENST00000492361 TRAV7A0A075B6U4 112 aa9.91□□□□□ -0.82
TNFRSF1B-203ENST00000492361 CHTF8P0CG12 524 aa9.91□□□□□ -0.82
TNFRSF1B-203ENST00000492361 WFDC13Q8IUB5 93 aa9.9□□□□□ -0.82
TNFRSF1B-203ENST00000492361 Q8N377 158 aa9.9□□□□□ -0.82
TNFRSF1B-203ENST00000492361 TRBV7-4A0A0J9YYF1 115 aa9.87□□□□□ -0.83
TNFRSF1B-203ENST00000492361 KRTAP26-1Q6PEX3 210 aa9.87□□□□□ -0.83
TNFRSF1B-203ENST00000492361 MRPL55Q7Z7F7 128 aaKnown RBP9.87□□□□□ -0.83
TNFRSF1B-203ENST00000492361 OXTP01178 125 aa9.86□□□□□ -0.83
TNFRSF1B-203ENST00000492361 SMIM29Q86T20 159 aa9.85□□□□□ -0.83
TNFRSF1B-203ENST00000492361 COL7A1Q02388 2944 aa9.84□□□□□ -0.83
TNFRSF1B-203ENST00000492361 Q9BRP9 147 aa9.84□□□□□ -0.83
TNFRSF1B-203ENST00000492361 TMEM254Q8TBM7 123 aa9.83□□□□□ -0.84
TNFRSF1B-203ENST00000492361 Q6ZRX8 168 aa9.83□□□□□ -0.84
TNFRSF1B-203ENST00000492361 CXCL6P80162 114 aa9.82□□□□□ -0.84
TNFRSF1B-203ENST00000492361 A0A087WSZ3 146 aa9.82□□□□□ -0.84
TNFRSF1B-203ENST00000492361 DHRS4-AS1Q9P1J3 65 aa9.81□□□□□ -0.84
TNFRSF1B-203ENST00000492361 RPL37AP61513 92 aaKnown RBP9.81□□□□□ -0.84
TNFRSF1B-203ENST00000492361 H7BZZ5 65 aa9.8□□□□□ -0.84
TNFRSF1B-203ENST00000492361 REG3GQ6UW15 175 aa9.8□□□□□ -0.84
TNFRSF1B-203ENST00000492361 H3BQ85 93 aa9.8□□□□□ -0.84
TNFRSF1B-203ENST00000492361 UBE2AP49459 152 aa9.8□□□□□ -0.84
TNFRSF1B-203ENST00000492361 LINC00474Q9P2X8 69 aa9.8□□□□□ -0.84
TNFRSF1B-203ENST00000492361 DNAH10OSP0CZ25 163 aa9.79□□□□□ -0.84
TNFRSF1B-203ENST00000492361 A0A1W2PNM2 257 aa9.79□□□□□ -0.84
TNFRSF1B-203ENST00000492361 H3BNG1 76 aa9.79□□□□□ -0.84
TNFRSF1B-203ENST00000492361 PHF5AQ7RTV0 110 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1B-203ENST00000492361 KCNQ1DNQ9H478 68 aa9.79□□□□□ -0.84
TNFRSF1B-203ENST00000492361 K7EIL1 84 aa9.79□□□□□ -0.84
TNFRSF1B-203ENST00000492361 IGLV1-50A0A075B6I6 118 aa9.77□□□□□ -0.85
TNFRSF1B-203ENST00000492361 IGKV4-1P06312 121 aa9.77□□□□□ -0.85
TNFRSF1B-203ENST00000492361 K7EQZ3 153 aa9.76□□□□□ -0.85
TNFRSF1B-203ENST00000492361 LINC00476Q8WZB0 136 aa9.75□□□□□ -0.85
TNFRSF1B-203ENST00000492361 H0Y9J4 135 aa9.74□□□□□ -0.85
TNFRSF1B-203ENST00000492361 IGLV9-49A0A0B4J1Y8 123 aa9.74□□□□□ -0.85
TNFRSF1B-203ENST00000492361 TRBV7-6A0A0J9YX20 115 aa9.73□□□□□ -0.85
TNFRSF1B-203ENST00000492361 KRTAP1-5Q9BYS1 174 aa9.73□□□□□ -0.85
TNFRSF1B-203ENST00000492361 A0A0U1RQV1 116 aa9.72□□□□□ -0.85
TNFRSF1B-203ENST00000492361 PRYO14603 147 aa9.71□□□□□ -0.85
TNFRSF1B-203ENST00000492361 BRK1Q8WUW1 75 aa9.71□□□□□ -0.85
TNFRSF1B-203ENST00000492361 C5orf47Q569G3 176 aa9.71□□□□□ -0.86
TNFRSF1B-203ENST00000492361 Q8NBF4 154 aa9.7□□□□□ -0.86
TNFRSF1B-203ENST00000492361 KRTAP7-1Q8IUC3 87 aa9.69□□□□□ -0.86
TNFRSF1B-203ENST00000492361 RPS28P62857 69 aaKnown RBP9.68□□□□□ -0.86
TNFRSF1B-203ENST00000492361 SERP1Q9Y6X1 66 aa9.68□□□□□ -0.86
TNFRSF1B-203ENST00000492361 TGP01266 2768 aa9.68□□□□□ -0.86
TNFRSF1B-203ENST00000492361 WIPF1O43516 503 aa9.68□□□□□ -0.86
TNFRSF1B-203ENST00000492361 PKIGQ9Y2B9 76 aa9.67□□□□□ -0.86
TNFRSF1B-203ENST00000492361 NDUFS5O43920 106 aa9.67□□□□□ -0.86
TNFRSF1B-203ENST00000492361 KLKP1Q107X0 134 aa9.65□□□□□ -0.86
TNFRSF1B-203ENST00000492361 IGFL1Q6UW32 110 aa9.65□□□□□ -0.86
TNFRSF1B-203ENST00000492361 LINC00208Q96KT6 92 aa9.65□□□□□ -0.86
TNFRSF1B-203ENST00000492361 EPM2AB3EWF7 344 aa9.65□□□□□ -0.87
TNFRSF1B-203ENST00000492361 ANK2Q01484 3957 aa9.64□□□□□ -0.87
TNFRSF1B-203ENST00000492361 ANAPC11Q9NYG5 84 aa9.64□□□□□ -0.87
TNFRSF1B-203ENST00000492361 IGLV5-48A0A075B6I7 105 aa9.62□□□□□ -0.87
TNFRSF1B-203ENST00000492361 SPINK6Q6UWN8 80 aa9.61□□□□□ -0.87
TNFRSF1B-203ENST00000492361 FAM229BQ4G0N7 80 aa9.6□□□□□ -0.87
TNFRSF1B-203ENST00000492361 Q5XG85 94 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms