RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 CSNK1G2-AS1Q8NCQ2 148 aa8.68□□□□□ -1.02
SHOX2-205ENST00000490689 CRYBG3Q68DQ2 2970 aa8.68□□□□□ -1.02
SHOX2-205ENST00000490689 SETXQ7Z333 2677 aaKnown RBP8.68□□□□□ -1.02
SHOX2-205ENST00000490689 IGSF10Q6WRI0 2623 aa8.67□□□□□ -1.02
SHOX2-205ENST00000490689 A0A096LNT2 108 aa8.67□□□□□ -1.02
SHOX2-205ENST00000490689 OBSCN-AS1Q96MR7 158 aa8.67□□□□□ -1.02
SHOX2-205ENST00000490689 FSHBP01225 129 aa8.66□□□□□ -1.02
SHOX2-205ENST00000490689 ELOF1P60002 83 aaKnown RBP8.66□□□□□ -1.02
SHOX2-205ENST00000490689 IGLV6-57P01721 117 aa8.66□□□□□ -1.02
SHOX2-205ENST00000490689 MAST4O15021 2626 aa8.66□□□□□ -1.02
SHOX2-205ENST00000490689 KLKP1Q107X0 134 aa8.65□□□□□ -1.02
SHOX2-205ENST00000490689 BCE1O60756 84 aa8.65□□□□□ -1.02
SHOX2-205ENST00000490689 NOTCH1P46531 2555 aa8.65□□□□□ -1.02
SHOX2-205ENST00000490689 A0A087WSZ3 146 aa8.65□□□□□ -1.02
SHOX2-205ENST00000490689 PMAIP1Q13794 54 aa8.65□□□□□ -1.02
SHOX2-205ENST00000490689 A6NED7 52 aa8.64□□□□□ -1.03
SHOX2-205ENST00000490689 CELSR1Q9NYQ6 3014 aa8.64□□□□□ -1.03
SHOX2-205ENST00000490689 TEP1Q99973 2627 aaKnown RBP8.64□□□□□ -1.03
SHOX2-205ENST00000490689 C7orf33Q8WU49 177 aa8.64□□□□□ -1.03
SHOX2-205ENST00000490689 OXTP01178 125 aa8.64□□□□□ -1.03
SHOX2-205ENST00000490689 SPENQ96T58 3664 aaKnown RBP8.64□□□□□ -1.03
SHOX2-205ENST00000490689 IGKV4-1P06312 121 aa8.63□□□□□ -1.03
SHOX2-205ENST00000490689 CELSR2Q9HCU4 2923 aa8.63□□□□□ -1.03
SHOX2-205ENST00000490689 ST20-AS1Q8NBB2 130 aa8.62□□□□□ -1.03
SHOX2-205ENST00000490689 C19orf73Q9NVV2 129 aa8.62□□□□□ -1.03
SHOX2-205ENST00000490689 PRR15LQ9BU68 103 aa8.6□□□□□ -1.03
SHOX2-205ENST00000490689 PRLHP81277 87 aa8.6□□□□□ -1.03
SHOX2-205ENST00000490689 C16orf95Q9H693 158 aa8.6□□□□□ -1.03
SHOX2-205ENST00000490689 VPREB1P12018 145 aa8.6□□□□□ -1.03
SHOX2-205ENST00000490689 MRPL55Q7Z7F7 128 aaKnown RBP8.59□□□□□ -1.03
SHOX2-205ENST00000490689 Q8NDZ9 215 aa8.59□□□□□ -1.03
SHOX2-205ENST00000490689 HELZ2Q9BYK8 2649 aaKnown RBP8.59□□□□□ -1.03
SHOX2-205ENST00000490689 Q5XG85 94 aa8.58□□□□□ -1.04
SHOX2-205ENST00000490689 LINC00167Q96N53 147 aa8.58□□□□□ -1.04
SHOX2-205ENST00000490689 BAHCC1Q9P281 2608 aa8.58□□□□□ -1.04
SHOX2-205ENST00000490689 COL6A5A8TX70 2615 aa8.58□□□□□ -1.04
SHOX2-205ENST00000490689 HCG22E2RYF7 251 aa8.58□□□□□ -1.04
SHOX2-205ENST00000490689 Q6ZRP5 223 aa8.58□□□□□ -1.04
SHOX2-205ENST00000490689 NBEAL1Q6ZS30 2694 aa8.58□□□□□ -1.04
SHOX2-205ENST00000490689 PCOTHQ58A44 107 aa8.58□□□□□ -1.04
SHOX2-205ENST00000490689 TRBV7-4A0A0J9YYF1 115 aa8.57□□□□□ -1.04
SHOX2-205ENST00000490689 A0A0G2JQZ4 141 aa8.57□□□□□ -1.04
SHOX2-205ENST00000490689 A0A1W2PNN7 141 aa8.57□□□□□ -1.04
SHOX2-205ENST00000490689 APCP25054 2843 aa8.56□□□□□ -1.04
SHOX2-205ENST00000490689 REG3GQ6UW15 175 aa8.55□□□□□ -1.04
SHOX2-205ENST00000490689 CASC2Q6XLA1 102 aa8.55□□□□□ -1.04
SHOX2-205ENST00000490689 SEC61GP60059 68 aa8.54□□□□□ -1.04
SHOX2-205ENST00000490689 LINC00528Q8N1L1 170 aa8.54□□□□□ -1.04
SHOX2-205ENST00000490689 H0Y9P7 68 aa8.54□□□□□ -1.04
SHOX2-205ENST00000490689 B9D2Q9BPU9 175 aa8.54□□□□□ -1.04
SHOX2-205ENST00000490689 IGLV9-49A0A0B4J1Y8 123 aa8.53□□□□□ -1.04
SHOX2-205ENST00000490689 FAM168BA1KXE4 195 aa8.53□□□□□ -1.04
SHOX2-205ENST00000490689 K7EQZ3 153 aa8.53□□□□□ -1.04
SHOX2-205ENST00000490689 Q8NAQ8 132 aa8.53□□□□□ -1.04
SHOX2-205ENST00000490689 SERTAD4-AS1Q5TG53 156 aa8.53□□□□□ -1.04
SHOX2-205ENST00000490689 SPINK6Q6UWN8 80 aa8.53□□□□□ -1.04
SHOX2-205ENST00000490689 Q8NBF4 154 aa8.53□□□□□ -1.04
SHOX2-205ENST00000490689 RPL37AP61513 92 aaKnown RBP8.52□□□□□ -1.04
SHOX2-205ENST00000490689 MXRA5Q9NR99 2828 aa8.52□□□□□ -1.05
SHOX2-205ENST00000490689 Q9BRP9 147 aa8.52□□□□□ -1.05
SHOX2-205ENST00000490689 GVQW2A0A096LPI5 108 aaPredicted RBP8.5□□□□□ -1.05
SHOX2-205ENST00000490689 Q6ZRX8 168 aa8.5□□□□□ -1.05
SHOX2-205ENST00000490689 A8MUN3 132 aa8.5□□□□□ -1.05
SHOX2-205ENST00000490689 Q8N377 158 aa8.5□□□□□ -1.05
SHOX2-205ENST00000490689 C1orf64Q8NEQ6 169 aa8.49□□□□□ -1.05
SHOX2-205ENST00000490689 LINC00476Q8WZB0 136 aa8.49□□□□□ -1.05
SHOX2-205ENST00000490689 FP248Q71RG6 208 aaPredicted RBP8.48□□□□□ -1.05
SHOX2-205ENST00000490689 PRR34Q9NV39 138 aa8.48□□□□□ -1.05
SHOX2-205ENST00000490689 HIVEP1P15822 2718 aa8.48□□□□□ -1.05
SHOX2-205ENST00000490689 WIPF1O43516 503 aa8.47□□□□□ -1.05
SHOX2-205ENST00000490689 LINC00612Q8N6U2 182 aa8.46□□□□□ -1.05
SHOX2-205ENST00000490689 ERC2-IT1O76042 136 aa8.46□□□□□ -1.06
SHOX2-205ENST00000490689 FAM229BQ4G0N7 80 aa8.45□□□□□ -1.06
SHOX2-205ENST00000490689 ITPR2Q14571 2701 aa8.45□□□□□ -1.06
SHOX2-205ENST00000490689 C15orf56Q8N910 161 aa8.44□□□□□ -1.06
SHOX2-205ENST00000490689 LINC01556Q5JQF7 62 aa8.43□□□□□ -1.06
SHOX2-205ENST00000490689 IGHV6-1A0A0B4J1U7 121 aa8.43□□□□□ -1.06
SHOX2-205ENST00000490689 A0A1W2PNM2 257 aa8.43□□□□□ -1.06
SHOX2-205ENST00000490689 hDV103S1A0JD37 113 aa8.42□□□□□ -1.06
SHOX2-205ENST00000490689 OCR1Q9BZK8 76 aa8.42□□□□□ -1.06
SHOX2-205ENST00000490689 KRTAP10-3P60369 221 aa8.42□□□□□ -1.06
SHOX2-205ENST00000490689 STAB1Q9NY15 2570 aa8.42□□□□□ -1.06
SHOX2-205ENST00000490689 KCNQ1DNQ9H478 68 aa8.42□□□□□ -1.06
SHOX2-205ENST00000490689 SPAG11AQ6PDA7 123 aa8.4□□□□□ -1.07
SHOX2-205ENST00000490689 TRAV22A0A0B4J277 110 aa8.4□□□□□ -1.07
SHOX2-205ENST00000490689 EPM2AB3EWF7 344 aa8.39□□□□□ -1.07
SHOX2-205ENST00000490689 NIPBLQ6KC79 2804 aaeCLIP8.37□□□□□ -1.07
SHOX2-205ENST00000490689 C14orf177Q52M58 125 aa8.37□□□□□ -1.07
SHOX2-205ENST00000490689 IGLV1-50A0A075B6I6 118 aa8.36□□□□□ -1.07
SHOX2-205ENST00000490689 LIMD2Q9BT23 127 aa8.36□□□□□ -1.07
SHOX2-205ENST00000490689 NSD1Q96L73 2696 aaPredicted RBP8.36□□□□□ -1.07
SHOX2-205ENST00000490689 F8WDY8 70 aa8.35□□□□□ -1.07
SHOX2-205ENST00000490689 CHTF8P0CG12 524 aa8.35□□□□□ -1.07
SHOX2-205ENST00000490689 KRTAP1-3Q8IUG1 177 aa8.35□□□□□ -1.07
SHOX2-205ENST00000490689 IGFL1Q6UW32 110 aa8.35□□□□□ -1.07
SHOX2-205ENST00000490689 RETNLBQ9BQ08 111 aa8.35□□□□□ -1.07
SHOX2-205ENST00000490689 CASC10Q5T4H9 136 aa8.34□□□□□ -1.07
SHOX2-205ENST00000490689 PHF5AQ7RTV0 110 aaKnown RBP8.34□□□□□ -1.07
SHOX2-205ENST00000490689 A0A1B0GW54 56 aa8.34□□□□□ -1.07
SHOX2-205ENST00000490689 LINC00588Q9Y4M8 146 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms