RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 SPRR1AP35321 89 aa8.22□□□□□ -1.09
SNX12-205ENST00000490561 VAMP3Q15836 100 aa8.22□□□□□ -1.09
SNX12-205ENST00000490561 SMIM11BQ8TCY0 68 aa8.22□□□□□ -1.09
SNX12-205ENST00000490561 SNHG12Q9BXW3 62 aa8.22□□□□□ -1.09
SNX12-205ENST00000490561 PSORS1C2Q9UIG4 136 aa8.22□□□□□ -1.09
SNX12-205ENST00000490561 ETDCA0A1B0GVM5 59 aa8.21□□□□□ -1.1
SNX12-205ENST00000490561 COL5A1-AS1Q5SY13 56 aa8.21□□□□□ -1.1
SNX12-205ENST00000490561 LINC00528Q8N1L1 170 aa8.21□□□□□ -1.1
SNX12-205ENST00000490561 C6orf99Q4VX62 202 aa8.2□□□□□ -1.1
SNX12-205ENST00000490561 C1orf137Q5JT78 98 aa8.2□□□□□ -1.1
SNX12-205ENST00000490561 TSPAN13O95857 204 aa8.19□□□□□ -1.1
SNX12-205ENST00000490561 COX6CP09669 75 aa8.19□□□□□ -1.1
SNX12-205ENST00000490561 RPL37AP61513 92 aaKnown RBP8.19□□□□□ -1.1
SNX12-205ENST00000490561 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
SNX12-205ENST00000490561 RYR1P21817 5038 aa8.18□□□□□ -1.1
SNX12-205ENST00000490561 KRTAP4-16G5E9R7 235 aaPredicted RBP8.18□□□□□ -1.1
SNX12-205ENST00000490561 H0Y9J4 135 aa8.18□□□□□ -1.1
SNX12-205ENST00000490561 FAM229AH3BQW9 127 aa8.18□□□□□ -1.1
SNX12-205ENST00000490561 COX7BP24311 80 aa8.18□□□□□ -1.1
SNX12-205ENST00000490561 PSMB2P49721 201 aa8.18□□□□□ -1.1
SNX12-205ENST00000490561 FAM19A1Q7Z5A9 133 aa8.18□□□□□ -1.1
SNX12-205ENST00000490561 H0YGX0 51 aa8.17□□□□□ -1.1
SNX12-205ENST00000490561 SMR3BP02814 79 aaPredicted RBP8.17□□□□□ -1.1
SNX12-205ENST00000490561 PLA2G1BP04054 148 aaKnown RBP8.17□□□□□ -1.1
SNX12-205ENST00000490561 UBE2AP49459 152 aa8.17□□□□□ -1.1
SNX12-205ENST00000490561 ELOF1P60002 83 aaKnown RBP8.17□□□□□ -1.1
SNX12-205ENST00000490561 LYRM7Q5U5X0 104 aa8.17□□□□□ -1.1
SNX12-205ENST00000490561 B5MCH6 92 aa8.16□□□□□ -1.1
SNX12-205ENST00000490561 SNCGO76070 127 aa8.16□□□□□ -1.1
SNX12-205ENST00000490561 IGLV7-43P04211 117 aa8.16□□□□□ -1.1
SNX12-205ENST00000490561 INAFM2P0DMQ5 153 aa8.16□□□□□ -1.1
SNX12-205ENST00000490561 Q6ZRX8 168 aa8.16□□□□□ -1.1
SNX12-205ENST00000490561 TRIAP1O43715 76 aa8.15□□□□□ -1.1
SNX12-205ENST00000490561 DHRS4-AS1Q9P1J3 65 aa8.15□□□□□ -1.1
SNX12-205ENST00000490561 C9orf118A6NHY6 69 aa8.14□□□□□ -1.11
SNX12-205ENST00000490561 TAX1BP3O14907 124 aa8.14□□□□□ -1.11
SNX12-205ENST00000490561 ZNF861PO60384 105 aa8.14□□□□□ -1.11
SNX12-205ENST00000490561 HSPG2P98160 4391 aa8.14□□□□□ -1.11
SNX12-205ENST00000490561 SLC25A20O43772 301 aa8.13□□□□□ -1.11
SNX12-205ENST00000490561 SCGB1C2P0DMR2 95 aa8.13□□□□□ -1.11
SNX12-205ENST00000490561 KRTAP13-1Q8IUC0 172 aa8.13□□□□□ -1.11
SNX12-205ENST00000490561 A0A1B0GX51 115 aa8.12□□□□□ -1.11
SNX12-205ENST00000490561 PRLHP81277 87 aa8.12□□□□□ -1.11
SNX12-205ENST00000490561 Q8N1X5 172 aa8.12□□□□□ -1.11
SNX12-205ENST00000490561 H3BUT2 72 aa8.11□□□□□ -1.11
SNX12-205ENST00000490561 VPS13BQ7Z7G8 4022 aa8.11□□□□□ -1.11
SNX12-205ENST00000490561 Q5VSD8 79 aa8.1□□□□□ -1.11
SNX12-205ENST00000490561 LINC00575Q6W349 94 aa8.1□□□□□ -1.11
SNX12-205ENST00000490561 FABP2P12104 132 aa8.09□□□□□ -1.11
SNX12-205ENST00000490561 SPINK6Q6UWN8 80 aa8.09□□□□□ -1.11
SNX12-205ENST00000490561 HIGD2AQ9BW72 106 aa8.09□□□□□ -1.11
SNX12-205ENST00000490561 TRBV20-1A0A075B6N2 111 aa8.08□□□□□ -1.12
SNX12-205ENST00000490561 A0A1W2PPM0 123 aa8.08□□□□□ -1.12
SNX12-205ENST00000490561 hADV29S1A0JD25 119 aa8.08□□□□□ -1.12
SNX12-205ENST00000490561 SMCR5Q8TEV8 140 aa8.08□□□□□ -1.12
SNX12-205ENST00000490561 Q9BRP9 147 aa8.08□□□□□ -1.12
SNX12-205ENST00000490561 ZNF706Q9Y5V0 76 aaPredicted RBP8.08□□□□□ -1.12
SNX12-205ENST00000490561 GHRHP01286 108 aa8.07□□□□□ -1.12
SNX12-205ENST00000490561 KRTAP10-4P60372 401 aaPredicted RBP8.07□□□□□ -1.12
SNX12-205ENST00000490561 NAA38Q9BRA0 125 aaKnown RBP8.07□□□□□ -1.12
SNX12-205ENST00000490561 LST1O00453 97 aa8.06□□□□□ -1.12
SNX12-205ENST00000490561 ATXN8Q156A1 80 aa8.06□□□□□ -1.12
SNX12-205ENST00000490561 KIAA1109Q2LD37 5005 aa8.06□□□□□ -1.12
SNX12-205ENST00000490561 DNAL4O96015 105 aa8.05□□□□□ -1.12
SNX12-205ENST00000490561 TRACP01848 142 aa8.05□□□□□ -1.12
SNX12-205ENST00000490561 OCIAD2Q56VL3 154 aa8.05□□□□□ -1.12
SNX12-205ENST00000490561 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.05□□□□□ -1.12
SNX12-205ENST00000490561 CLEC2BQ92478 149 aa8.05□□□□□ -1.12
SNX12-205ENST00000490561 FAT1Q14517 4588 aa8.05□□□□□ -1.12
SNX12-205ENST00000490561 H3BQ85 93 aa8.04□□□□□ -1.12
SNX12-205ENST00000490561 FAM218AQ96MZ4 157 aa8.04□□□□□ -1.12
SNX12-205ENST00000490561 PKHD1L1Q86WI1 4243 aa8.02□□□□□ -1.13
SNX12-205ENST00000490561 ERC2-IT1O76042 136 aa8.02□□□□□ -1.13
SNX12-205ENST00000490561 TCL1BO95988 128 aa8.02□□□□□ -1.13
SNX12-205ENST00000490561 PPDPFLQ8WWR9 84 aa8.02□□□□□ -1.13
SNX12-205ENST00000490561 HERC2O95714 4834 aa8.02□□□□□ -1.13
SNX12-205ENST00000490561 Q6ZQY7 126 aa8.01□□□□□ -1.13
SNX12-205ENST00000490561 SPCS1Q9Y6A9 102 aa8.01□□□□□ -1.13
SNX12-205ENST00000490561 SPRR4Q96PI1 79 aa8□□□□□ -1.13
SNX12-205ENST00000490561 IGLV5-48A0A075B6I7 105 aa7.99□□□□□ -1.13
SNX12-205ENST00000490561 TEX49A0A1B0GTD5 131 aa7.99□□□□□ -1.13
SNX12-205ENST00000490561 GTF2H5Q6ZYL4 71 aa7.99□□□□□ -1.13
SNX12-205ENST00000490561 ORMDL1Q9P0S3 153 aa7.99□□□□□ -1.13
SNX12-205ENST00000490561 K7EP34 96 aa7.98□□□□□ -1.13
SNX12-205ENST00000490561 SPRR1BP22528 89 aa7.98□□□□□ -1.13
SNX12-205ENST00000490561 FAM229BQ4G0N7 80 aa7.97□□□□□ -1.13
SNX12-205ENST00000490561 LINC00483Q53H64 154 aa7.97□□□□□ -1.13
SNX12-205ENST00000490561 GAGE2AQ6NT46 116 aa7.97□□□□□ -1.13
SNX12-205ENST00000490561 ST20-AS1Q8NBB2 130 aa7.97□□□□□ -1.13
SNX12-205ENST00000490561 TMEM256-PLSCR3K7ERE1 68 aa7.95□□□□□ -1.14
SNX12-205ENST00000490561 DEFB105AQ8NG35 78 aa7.95□□□□□ -1.14
SNX12-205ENST00000490561 LINC01547P58512 204 aaPredicted RBP7.94□□□□□ -1.14
SNX12-205ENST00000490561 KRTAP17-1Q9BYP8 105 aa7.94□□□□□ -1.14
SNX12-205ENST00000490561 LAMTOR3Q9UHA4 124 aa7.94□□□□□ -1.14
SNX12-205ENST00000490561 H3BMG7 143 aa7.93□□□□□ -1.14
SNX12-205ENST00000490561 Q8N377 158 aa7.93□□□□□ -1.14
SNX12-205ENST00000490561 C9JAW5 83 aa7.92□□□□□ -1.14
SNX12-205ENST00000490561 H3BT86 120 aa7.92□□□□□ -1.14
SNX12-205ENST00000490561 KRTAP1-4P0C5Y4 121 aa7.92□□□□□ -1.14
SNX12-205ENST00000490561 BAALC-AS2P0C853 105 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms