RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 SPANXCQ9NY87 97 aa8.69□□□□□ -1.02
SRGAP3-208ENST00000490348 TRBV10-2A0A0K0K1G8 114 aa8.68□□□□□ -1.02
SRGAP3-208ENST00000490348 J3QL48 77 aa8.67□□□□□ -1.02
SRGAP3-208ENST00000490348 LINC01600Q96MT4 127 aa8.67□□□□□ -1.02
SRGAP3-208ENST00000490348 KCNQ1DNQ9H478 68 aa8.67□□□□□ -1.02
SRGAP3-208ENST00000490348 KRTAP1-4P0C5Y4 121 aa8.66□□□□□ -1.02
SRGAP3-208ENST00000490348 BVES-AS1Q5T3Y7 98 aa8.66□□□□□ -1.02
SRGAP3-208ENST00000490348 IGLV6-57P01721 117 aa8.65□□□□□ -1.02
SRGAP3-208ENST00000490348 SPRR1AP35321 89 aa8.65□□□□□ -1.02
SRGAP3-208ENST00000490348 RPL28P46779 137 aaKnown RBP8.65□□□□□ -1.02
SRGAP3-208ENST00000490348 PRLHP81277 87 aa8.65□□□□□ -1.02
SRGAP3-208ENST00000490348 KRTAP4-16G5E9R7 235 aaPredicted RBP8.65□□□□□ -1.03
SRGAP3-208ENST00000490348 PRYO14603 147 aa8.65□□□□□ -1.03
SRGAP3-208ENST00000490348 UBE2AP49459 152 aa8.65□□□□□ -1.03
SRGAP3-208ENST00000490348 UBE2V1Q13404 147 aa8.64□□□□□ -1.03
SRGAP3-208ENST00000490348 FAM19A1Q7Z5A9 133 aa8.64□□□□□ -1.03
SRGAP3-208ENST00000490348 MUSTN1Q8IVN3 82 aa8.63□□□□□ -1.03
SRGAP3-208ENST00000490348 C2orf91Q6ZV80 131 aa8.62□□□□□ -1.03
SRGAP3-208ENST00000490348 Q6ZVH6 145 aa8.62□□□□□ -1.03
SRGAP3-208ENST00000490348 PPDPFQ9H3Y8 114 aa8.62□□□□□ -1.03
SRGAP3-208ENST00000490348 IFITM1P13164 125 aa8.61□□□□□ -1.03
SRGAP3-208ENST00000490348 KRTAP10-8P60410 259 aa8.61□□□□□ -1.03
SRGAP3-208ENST00000490348 HSD52Q0P140 79 aa8.61□□□□□ -1.03
SRGAP3-208ENST00000490348 LINC00337Q8N6G1 96 aa8.61□□□□□ -1.03
SRGAP3-208ENST00000490348 TAX1BP3O14907 124 aa8.61□□□□□ -1.03
SRGAP3-208ENST00000490348 S100A7L2Q5SY68 101 aa8.61□□□□□ -1.03
SRGAP3-208ENST00000490348 A6NDN8 102 aa8.6□□□□□ -1.03
SRGAP3-208ENST00000490348 TRAV23DV6A0A075B6W5 121 aa8.59□□□□□ -1.03
SRGAP3-208ENST00000490348 HIGD1BQ9P298 99 aa8.59□□□□□ -1.03
SRGAP3-208ENST00000490348 HMCN2Q8NDA2 5059 aa8.59□□□□□ -1.03
SRGAP3-208ENST00000490348 B5MCH6 92 aa8.58□□□□□ -1.04
SRGAP3-208ENST00000490348 VAMP3Q15836 100 aa8.58□□□□□ -1.04
SRGAP3-208ENST00000490348 PRR26Q8N8Z3 221 aa8.58□□□□□ -1.04
SRGAP3-208ENST00000490348 COPS9Q8WXC6 57 aa8.57□□□□□ -1.04
SRGAP3-208ENST00000490348 ETDCA0A1B0GVM5 59 aa8.56□□□□□ -1.04
SRGAP3-208ENST00000490348 OR13C6PQ8NH95 151 aa8.56□□□□□ -1.04
SRGAP3-208ENST00000490348 SMCR5Q8TEV8 140 aa8.56□□□□□ -1.04
SRGAP3-208ENST00000490348 HIGD2AQ9BW72 106 aa8.56□□□□□ -1.04
SRGAP3-208ENST00000490348 ANAPC11Q9NYG5 84 aa8.56□□□□□ -1.04
SRGAP3-208ENST00000490348 ZNF73O43830 326 aaPredicted RBP8.56□□□□□ -1.04
SRGAP3-208ENST00000490348 A0A087X002 238 aa8.55□□□□□ -1.04
SRGAP3-208ENST00000490348 Q9BRP9 147 aa8.55□□□□□ -1.04
SRGAP3-208ENST00000490348 Q6ZRX8 168 aa8.54□□□□□ -1.04
SRGAP3-208ENST00000490348 CBY1Q9Y3M2 126 aa8.54□□□□□ -1.04
SRGAP3-208ENST00000490348 A4D1N5 150 aa8.53□□□□□ -1.04
SRGAP3-208ENST00000490348 C9orf118A6NHY6 69 aa8.52□□□□□ -1.04
SRGAP3-208ENST00000490348 ERC2-IT1O76042 136 aa8.52□□□□□ -1.04
SRGAP3-208ENST00000490348 TAL2Q16559 108 aa8.52□□□□□ -1.04
SRGAP3-208ENST00000490348 GTF2H5Q6ZYL4 71 aa8.52□□□□□ -1.04
SRGAP3-208ENST00000490348 HIST1H4GQ99525 98 aa8.52□□□□□ -1.04
SRGAP3-208ENST00000490348 KRTAP13-2Q52LG2 175 aa8.5□□□□□ -1.05
SRGAP3-208ENST00000490348 SPRR4Q96PI1 79 aa8.5□□□□□ -1.05
SRGAP3-208ENST00000490348 C6orf99Q4VX62 202 aa8.49□□□□□ -1.05
SRGAP3-208ENST00000490348 TRAV13-2A0A0B4J235 113 aa8.48□□□□□ -1.05
SRGAP3-208ENST00000490348 CRYGAP11844 174 aa8.48□□□□□ -1.05
SRGAP3-208ENST00000490348 RPL13AP40429 203 aaKnown RBP8.48□□□□□ -1.05
SRGAP3-208ENST00000490348 FAM229BQ4G0N7 80 aa8.48□□□□□ -1.05
SRGAP3-208ENST00000490348 ELOF1P60002 83 aaKnown RBP8.47□□□□□ -1.05
SRGAP3-208ENST00000490348 SMIM11BQ8TCY0 68 aa8.47□□□□□ -1.05
SRGAP3-208ENST00000490348 K7EP34 96 aa8.46□□□□□ -1.06
SRGAP3-208ENST00000490348 CEND1Q8N111 149 aa8.46□□□□□ -1.06
SRGAP3-208ENST00000490348 A0A1W2PPM0 123 aa8.44□□□□□ -1.06
SRGAP3-208ENST00000490348 FABP2P12104 132 aa8.44□□□□□ -1.06
SRGAP3-208ENST00000490348 COX7BP24311 80 aa8.44□□□□□ -1.06
SRGAP3-208ENST00000490348 LINC00483Q53H64 154 aa8.44□□□□□ -1.06
SRGAP3-208ENST00000490348 ZNF706Q9Y5V0 76 aaPredicted RBP8.44□□□□□ -1.06
SRGAP3-208ENST00000490348 TRBV7-6A0A0J9YX20 115 aa8.44□□□□□ -1.06
SRGAP3-208ENST00000490348 H3BUT2 72 aa8.44□□□□□ -1.06
SRGAP3-208ENST00000490348 CFC1BP0CG36 223 aa8.44□□□□□ -1.06
SRGAP3-208ENST00000490348 CFC1P0CG37 223 aa8.44□□□□□ -1.06
SRGAP3-208ENST00000490348 C3orf22Q8N5N4 141 aa8.44□□□□□ -1.06
SRGAP3-208ENST00000490348 ST20-AS1Q8NBB2 130 aa8.44□□□□□ -1.06
SRGAP3-208ENST00000490348 FXYD2P54710 66 aa8.43□□□□□ -1.06
SRGAP3-208ENST00000490348 GAGE2AQ6NT46 116 aa8.43□□□□□ -1.06
SRGAP3-208ENST00000490348 TYMSOSQ8TAI1 123 aa8.43□□□□□ -1.06
SRGAP3-208ENST00000490348 K7ERU9 68 aa8.42□□□□□ -1.06
SRGAP3-208ENST00000490348 OCIAD2Q56VL3 154 aa8.42□□□□□ -1.06
SRGAP3-208ENST00000490348 DHRS4-AS1Q9P1J3 65 aa8.41□□□□□ -1.06
SRGAP3-208ENST00000490348 SPCS1Q9Y6A9 102 aa8.41□□□□□ -1.06
SRGAP3-208ENST00000490348 TMEM238LA0A1B0GVL6 79 aa8.4□□□□□ -1.06
SRGAP3-208ENST00000490348 A0A1B0GWB2 263 aa8.4□□□□□ -1.06
SRGAP3-208ENST00000490348 A6NJY4 79 aa8.4□□□□□ -1.06
SRGAP3-208ENST00000490348 RAB37Q96AX2 223 aa8.39□□□□□ -1.07
SRGAP3-208ENST00000490348 LRP2P98164 4655 aa8.39□□□□□ -1.07
SRGAP3-208ENST00000490348 A0A0B4J2C4 111 aa8.39□□□□□ -1.07
SRGAP3-208ENST00000490348 NHP2Q9NX24 153 aaKnown RBP8.39□□□□□ -1.07
SRGAP3-208ENST00000490348 H7C2G1 150 aa8.36□□□□□ -1.07
SRGAP3-208ENST00000490348 UBR4Q5T4S7 5183 aa8.35□□□□□ -1.07
SRGAP3-208ENST00000490348 SPRR1BP22528 89 aa8.35□□□□□ -1.07
SRGAP3-208ENST00000490348 LINC01547P58512 204 aaPredicted RBP8.35□□□□□ -1.07
SRGAP3-208ENST00000490348 SVIPQ8NHG7 77 aa8.35□□□□□ -1.07
SRGAP3-208ENST00000490348 IGLV9-49A0A0B4J1Y8 123 aa8.34□□□□□ -1.07
SRGAP3-208ENST00000490348 K7ERJ3 54 aa8.34□□□□□ -1.07
SRGAP3-208ENST00000490348 LYRM7Q5U5X0 104 aa8.34□□□□□ -1.07
SRGAP3-208ENST00000490348 LINC00575Q6W349 94 aa8.34□□□□□ -1.07
SRGAP3-208ENST00000490348 LINC00304Q8N9R0 145 aa8.34□□□□□ -1.07
SRGAP3-208ENST00000490348 TSPAN13O95857 204 aa8.33□□□□□ -1.08
SRGAP3-208ENST00000490348 MOBPQ13875 183 aa8.33□□□□□ -1.08
SRGAP3-208ENST00000490348 NAA38Q9BRA0 125 aaKnown RBP8.33□□□□□ -1.08
SRGAP3-208ENST00000490348 PRO1854Q9UHT4 67 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms