RNA–Protein interactions for RNA: ENST00000490222.1

LRRC1-204, Transcript of leucine rich repeat containing 1, humanhuman

TSL 3

Gene LRRC1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-204ENST00000490222 COX8AP10176 69 aa1.35□□□□□ -2.19
LRRC1-204ENST00000490222 GCHFRP30047 84 aa1.35□□□□□ -2.19
LRRC1-204ENST00000490222 RPL37AP61513 92 aaKnown RBP1.35□□□□□ -2.19
LRRC1-204ENST00000490222 DEFB121Q5J5C9 76 aa1.35□□□□□ -2.19
LRRC1-204ENST00000490222 BAGE2Q86Y30 109 aa1.35□□□□□ -2.19
LRRC1-204ENST00000490222 DEFB124Q8NES8 71 aa1.35□□□□□ -2.19
LRRC1-204ENST00000490222 PRR15LQ9BU68 103 aa1.35□□□□□ -2.19
LRRC1-204ENST00000490222 SMG1Q96Q15 3661 aaKnown RBP1.35□□□□□ -2.19
LRRC1-204ENST00000490222 DSPP15924 2871 aaKnown RBP1.35□□□□□ -2.19
LRRC1-204ENST00000490222 ASCC3Q8N3C0 2202 aaKnown RBP1.35□□□□□ -2.19
LRRC1-204ENST00000490222 DMDP11532 3685 aa1.35□□□□□ -2.19
LRRC1-204ENST00000490222 CACNA1EQ15878 2313 aa1.34□□□□□ -2.19
LRRC1-204ENST00000490222 NBASA2RRP1 2371 aa1.34□□□□□ -2.19
LRRC1-204ENST00000490222 F8P00451 2351 aa1.34□□□□□ -2.19
LRRC1-204ENST00000490222 F5P12259 2224 aa1.34□□□□□ -2.19
LRRC1-204ENST00000490222 FRYQ5TBA9 3013 aa1.34□□□□□ -2.19
LRRC1-204ENST00000490222 LOC110117498A0A087WWA1 95 aa1.34□□□□□ -2.19
LRRC1-204ENST00000490222 H3BVH4 76 aa1.34□□□□□ -2.19
LRRC1-204ENST00000490222 IFI27P40305 119 aaPredicted RBP1.34□□□□□ -2.19
LRRC1-204ENST00000490222 SPINT3P49223 89 aa1.34□□□□□ -2.19
LRRC1-204ENST00000490222 COX17Q14061 63 aa1.34□□□□□ -2.19
LRRC1-204ENST00000490222 Q6JHZ5 121 aa1.34□□□□□ -2.19
LRRC1-204ENST00000490222 BAGE3Q86Y29 109 aa1.34□□□□□ -2.19
LRRC1-204ENST00000490222 SMIM4Q8WVI0 70 aa1.34□□□□□ -2.19
LRRC1-204ENST00000490222 TLN1Q9Y490 2541 aaKnown RBP1.34□□□□□ -2.2
LRRC1-204ENST00000490222 TEX15Q9BXT5 2789 aa1.34□□□□□ -2.2
LRRC1-204ENST00000490222 POLQO75417 2590 aa1.34□□□□□ -2.2
LRRC1-204ENST00000490222 NAV3Q8IVL0 2385 aa1.34□□□□□ -2.2
LRRC1-204ENST00000490222 LOC400499M0QZD8 3231 aa1.34□□□□□ -2.2
LRRC1-204ENST00000490222 SPEGQ15772 3267 aa1.34□□□□□ -2.2
LRRC1-204ENST00000490222 TNRC6BQ9UPQ9 1833 aaKnown RBP1.33□□□□□ -2.2
LRRC1-204ENST00000490222 ABCA4P78363 2273 aa1.33□□□□□ -2.2
LRRC1-204ENST00000490222 ITPR1Q14643 2758 aa1.33□□□□□ -2.2
LRRC1-204ENST00000490222 A0A0D9SFI3 127 aa1.33□□□□□ -2.2
LRRC1-204ENST00000490222 M0R135 149 aa1.33□□□□□ -2.2
LRRC1-204ENST00000490222 M0R2N4 97 aa1.33□□□□□ -2.2
LRRC1-204ENST00000490222 CCL18P55774 89 aa1.33□□□□□ -2.2
LRRC1-204ENST00000490222 PSENENQ9NZ42 101 aa1.33□□□□□ -2.2
LRRC1-204ENST00000490222 LINC01558Q9Y6Z2 57 aa1.33□□□□□ -2.2
LRRC1-204ENST00000490222 KALRNO60229 2985 aa1.33□□□□□ -2.2
LRRC1-204ENST00000490222 SDK1Q7Z5N4 2213 aa1.32□□□□□ -2.2
LRRC1-204ENST00000490222 JMJD1CQ15652 2540 aa1.32□□□□□ -2.2
LRRC1-204ENST00000490222 FREM2Q5SZK8 3169 aa1.32□□□□□ -2.2
LRRC1-204ENST00000490222 CLPSL1A2RUU4 121 aa1.32□□□□□ -2.2
LRRC1-204ENST00000490222 INE1O15225 51 aa1.32□□□□□ -2.2
LRRC1-204ENST00000490222 ZZEF1O43149 2961 aa1.32□□□□□ -2.2
LRRC1-204ENST00000490222 HCRTO43612 131 aa1.32□□□□□ -2.2
LRRC1-204ENST00000490222 NDUFB1O75438 58 aa1.32□□□□□ -2.2
LRRC1-204ENST00000490222 CD52P31358 61 aa1.32□□□□□ -2.2
LRRC1-204ENST00000490222 FXYD3Q14802 87 aa1.32□□□□□ -2.2
LRRC1-204ENST00000490222 ATXN8Q156A1 80 aa1.32□□□□□ -2.2
LRRC1-204ENST00000490222 KNTC1P50748 2209 aa1.32□□□□□ -2.2
LRRC1-204ENST00000490222 MED13LQ71F56 2210 aa1.32□□□□□ -2.2
LRRC1-204ENST00000490222 UBR5O95071 2799 aaPredicted RBP1.31□□□□□ -2.2
LRRC1-204ENST00000490222 TENM4Q6N022 2769 aa1.31□□□□□ -2.2
LRRC1-204ENST00000490222 NBEAQ8NFP9 2946 aa1.31□□□□□ -2.2
LRRC1-204ENST00000490222 A0A1B0GUT8 65 aa1.31□□□□□ -2.2
LRRC1-204ENST00000490222 IGKV2-29A2NJV5 120 aaPredicted RBP1.31□□□□□ -2.2
LRRC1-204ENST00000490222 M0R3E3 92 aa1.31□□□□□ -2.2
LRRC1-204ENST00000490222 C3orf79P0CE67 100 aa1.31□□□□□ -2.2
LRRC1-204ENST00000490222 COX6B1P14854 86 aa1.31□□□□□ -2.2
LRRC1-204ENST00000490222 Q6ZQY7 126 aa1.31□□□□□ -2.2
LRRC1-204ENST00000490222 HILPDAQ9Y5L2 63 aa1.31□□□□□ -2.2
LRRC1-204ENST00000490222 FBN2P35556 2912 aa1.31□□□□□ -2.2
LRRC1-204ENST00000490222 USP9YO00507 2555 aaPredicted RBP1.31□□□□□ -2.2
LRRC1-204ENST00000490222 DMXL2Q8TDJ6 3036 aa1.31□□□□□ -2.2
LRRC1-204ENST00000490222 ANKHD1Q8IWZ3 2542 aaKnown RBP1.3□□□□□ -2.2
LRRC1-204ENST00000490222 WDFY3Q8IZQ1 3526 aa1.3□□□□□ -2.2
LRRC1-204ENST00000490222 DNAJC13O75165 2243 aa1.3□□□□□ -2.2
LRRC1-204ENST00000490222 A0A087WVE0 104 aa1.3□□□□□ -2.2
LRRC1-204ENST00000490222 TRAV1-2A0A0B4J238 106 aa1.3□□□□□ -2.2
LRRC1-204ENST00000490222 CAV3P56539 151 aa1.3□□□□□ -2.2
LRRC1-204ENST00000490222 FXYD4P59646 89 aa1.3□□□□□ -2.2
LRRC1-204ENST00000490222 GDF5OSQ5U4N7 250 aa1.3□□□□□ -2.2
LRRC1-204ENST00000490222 WFDC6Q9BQY6 131 aa1.3□□□□□ -2.2
LRRC1-204ENST00000490222 LINC00846Q9NV44 126 aa1.3□□□□□ -2.2
LRRC1-204ENST00000490222 UBE2D4Q9Y2X8 147 aa1.3□□□□□ -2.2
LRRC1-204ENST00000490222 ATRQ13535 2644 aa1.29□□□□□ -2.2
LRRC1-204ENST00000490222 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.29□□□□□ -2.2
LRRC1-204ENST00000490222 NBDYA0A0U1RRE5 68 aa1.29□□□□□ -2.2
LRRC1-204ENST00000490222 H0Y9P7 68 aa1.29□□□□□ -2.2
LRRC1-204ENST00000490222 ACYP2P14621 99 aa1.29□□□□□ -2.2
LRRC1-204ENST00000490222 C5orf56Q8N8D9 126 aa1.29□□□□□ -2.2
LRRC1-204ENST00000490222 CSPG4Q6UVK1 2322 aa1.29□□□□□ -2.2
LRRC1-204ENST00000490222 CCDC168Q8NDH2 2452 aa1.29□□□□□ -2.2
LRRC1-204ENST00000490222 SETD2Q9BYW2 2564 aaPredicted RBP1.29□□□□□ -2.2
LRRC1-204ENST00000490222 NBPF19A0A087WUL8 3843 aa1.29□□□□□ -2.2
LRRC1-204ENST00000490222 LAMA5O15230 3695 aa1.28□□□□□ -2.2
LRRC1-204ENST00000490222 FXYD6-FXYD2A0A087WZ82 144 aa1.28□□□□□ -2.2
LRRC1-204ENST00000490222 SNRPGP15A8MWD9 76 aa1.28□□□□□ -2.2
LRRC1-204ENST00000490222 HMGA1P17096 107 aaKnown RBP1.28□□□□□ -2.2
LRRC1-204ENST00000490222 DEFB107AQ8IZN7 70 aa1.28□□□□□ -2.2
LRRC1-204ENST00000490222 FDCSPQ8NFU4 85 aa1.28□□□□□ -2.2
LRRC1-204ENST00000490222 FAM103A1Q9BTL3 118 aaKnown RBP1.28□□□□□ -2.2
LRRC1-204ENST00000490222 FXYD6Q9H0Q3 95 aa1.28□□□□□ -2.2
LRRC1-204ENST00000490222 COL12A1Q99715 3063 aa1.28□□□□□ -2.2
LRRC1-204ENST00000490222 CELSR3Q9NYQ7 3312 aa1.27□□□□□ -2.21
LRRC1-204ENST00000490222 BOD1L1Q8NFC6 3051 aa1.27□□□□□ -2.21
LRRC1-204ENST00000490222 AKAP13Q12802 2813 aa1.27□□□□□ -2.21
LRRC1-204ENST00000490222 HIVEP3Q5T1R4 2406 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms