RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 COL5A1-AS1Q5SY13 56 aa6.82□□□□□ -1.32
SRSF4-204ENST00000489898 C3orf22Q8N5N4 141 aa6.82□□□□□ -1.32
SRSF4-204ENST00000489898 HIST1H4GQ99525 98 aa6.82□□□□□ -1.32
SRSF4-204ENST00000489898 TMEM238LA0A1B0GVL6 79 aa6.81□□□□□ -1.32
SRSF4-204ENST00000489898 A6NDN8 102 aa6.81□□□□□ -1.32
SRSF4-204ENST00000489898 A6NJY4 79 aa6.81□□□□□ -1.32
SRSF4-204ENST00000489898 C2orf91Q6ZV80 131 aa6.81□□□□□ -1.32
SRSF4-204ENST00000489898 TYMSOSQ8TAI1 123 aa6.81□□□□□ -1.32
SRSF4-204ENST00000489898 TTTY13Q9BZ97 58 aa6.81□□□□□ -1.32
SRSF4-204ENST00000489898 TSPAN13O95857 204 aa6.8□□□□□ -1.32
SRSF4-204ENST00000489898 SMIM13P0DJ93 91 aa6.8□□□□□ -1.32
SRSF4-204ENST00000489898 UBE2AP49459 152 aa6.8□□□□□ -1.32
SRSF4-204ENST00000489898 PRR4Q16378 134 aa6.8□□□□□ -1.32
SRSF4-204ENST00000489898 TAL2Q16559 108 aa6.8□□□□□ -1.32
SRSF4-204ENST00000489898 SFTA2Q6UW10 78 aa6.8□□□□□ -1.32
SRSF4-204ENST00000489898 SNHG12Q9BXW3 62 aa6.8□□□□□ -1.32
SRSF4-204ENST00000489898 NDUFA12Q9UI09 145 aa6.8□□□□□ -1.32
SRSF4-204ENST00000489898 FAM19A1Q7Z5A9 133 aa6.79□□□□□ -1.32
SRSF4-204ENST00000489898 RETNLBQ9BQ08 111 aa6.79□□□□□ -1.32
SRSF4-204ENST00000489898 LOC107984156A0A0G2JMH3 177 aa6.78□□□□□ -1.32
SRSF4-204ENST00000489898 A0A0U1RRA0 63 aa6.78□□□□□ -1.32
SRSF4-204ENST00000489898 EIF4EBP3O60516 100 aaPredicted RBP6.78□□□□□ -1.32
SRSF4-204ENST00000489898 BVES-AS1Q5T3Y7 98 aa6.78□□□□□ -1.32
SRSF4-204ENST00000489898 LCE2AQ5TA79 106 aaPredicted RBP6.78□□□□□ -1.32
SRSF4-204ENST00000489898 ARL17AQ8IVW1 177 aa6.78□□□□□ -1.32
SRSF4-204ENST00000489898 MIR7-3HGQ8N6C7 128 aa6.78□□□□□ -1.32
SRSF4-204ENST00000489898 COPS9Q8WXC6 57 aa6.78□□□□□ -1.32
SRSF4-204ENST00000489898 SPRR4Q96PI1 79 aa6.78□□□□□ -1.32
SRSF4-204ENST00000489898 HERV-K104P63124 156 aa6.77□□□□□ -1.33
SRSF4-204ENST00000489898 RPL24P83731 157 aaKnown RBP6.77□□□□□ -1.33
SRSF4-204ENST00000489898 MEIG1Q5JSS6 88 aa6.77□□□□□ -1.33
SRSF4-204ENST00000489898 LINC00304Q8N9R0 145 aa6.77□□□□□ -1.33
SRSF4-204ENST00000489898 SMCR5Q8TEV8 140 aa6.77□□□□□ -1.33
SRSF4-204ENST00000489898 KCNQ1DNQ9H478 68 aa6.77□□□□□ -1.33
SRSF4-204ENST00000489898 PRYO14603 147 aa6.76□□□□□ -1.33
SRSF4-204ENST00000489898 NCR3O14931 201 aa6.76□□□□□ -1.33
SRSF4-204ENST00000489898 CEND1Q8N111 149 aa6.76□□□□□ -1.33
SRSF4-204ENST00000489898 LINC00158P58513 81 aa6.75□□□□□ -1.33
SRSF4-204ENST00000489898 SOSTDC1Q6X4U4 206 aa6.75□□□□□ -1.33
SRSF4-204ENST00000489898 LINC00337Q8N6G1 96 aa6.75□□□□□ -1.33
SRSF4-204ENST00000489898 DAND5Q8N907 189 aa6.75□□□□□ -1.33
SRSF4-204ENST00000489898 SPANXB1Q9NS25 103 aaPredicted RBP6.75□□□□□ -1.33
SRSF4-204ENST00000489898 A0A0J9YXY3 114 aa6.74□□□□□ -1.33
SRSF4-204ENST00000489898 TRBV10-3A0A0K0K1G6 114 aa6.74□□□□□ -1.33
SRSF4-204ENST00000489898 TIMM17BO60830 172 aa6.74□□□□□ -1.33
SRSF4-204ENST00000489898 TPRXLQ17RH7 258 aa6.74□□□□□ -1.33
SRSF4-204ENST00000489898 LINC00483Q53H64 154 aa6.74□□□□□ -1.33
SRSF4-204ENST00000489898 Q6ZVH6 145 aa6.74□□□□□ -1.33
SRSF4-204ENST00000489898 ERC2-IT1O76042 136 aa6.73□□□□□ -1.33
SRSF4-204ENST00000489898 Q9BRP9 147 aa6.73□□□□□ -1.33
SRSF4-204ENST00000489898 HIGD2AQ9BW72 106 aa6.73□□□□□ -1.33
SRSF4-204ENST00000489898 NHP2Q9NX24 153 aaKnown RBP6.72□□□□□ -1.33
SRSF4-204ENST00000489898 B5MCH6 92 aa6.71□□□□□ -1.34
SRSF4-204ENST00000489898 IFITM1P13164 125 aa6.71□□□□□ -1.34
SRSF4-204ENST00000489898 LITAFQ99732 161 aa6.71□□□□□ -1.34
SRSF4-204ENST00000489898 SPANXDQ9BXN6 97 aa6.71□□□□□ -1.34
SRSF4-204ENST00000489898 SPANXCQ9NY87 97 aa6.71□□□□□ -1.34
SRSF4-204ENST00000489898 FXYD2P54710 66 aa6.7□□□□□ -1.34
SRSF4-204ENST00000489898 ADAMTSL4-AS1Q5T5F5 129 aa6.7□□□□□ -1.34
SRSF4-204ENST00000489898 RAB37Q96AX2 223 aa6.7□□□□□ -1.34
SRSF4-204ENST00000489898 IGLV6-57P01721 117 aa6.69□□□□□ -1.34
SRSF4-204ENST00000489898 TRBV10-2A0A0K0K1G8 114 aa6.68□□□□□ -1.34
SRSF4-204ENST00000489898 LYRM7Q5U5X0 104 aa6.68□□□□□ -1.34
SRSF4-204ENST00000489898 A0A1B0GV90 55 aa6.67□□□□□ -1.34
SRSF4-204ENST00000489898 VAMP3Q15836 100 aa6.67□□□□□ -1.34
SRSF4-204ENST00000489898 KRTAP13-3Q3SY46 172 aa6.67□□□□□ -1.34
SRSF4-204ENST00000489898 Q6ZRX8 168 aa6.67□□□□□ -1.34
SRSF4-204ENST00000489898 MUSTN1Q8IVN3 82 aa6.67□□□□□ -1.34
SRSF4-204ENST00000489898 Q8NBF4 154 aa6.67□□□□□ -1.34
SRSF4-204ENST00000489898 K7ERJ3 54 aa6.66□□□□□ -1.34
SRSF4-204ENST00000489898 NDUFC2O95298 119 aa6.66□□□□□ -1.34
SRSF4-204ENST00000489898 NPC2P61916 151 aa6.66□□□□□ -1.34
SRSF4-204ENST00000489898 Q1RN00 199 aa6.66□□□□□ -1.34
SRSF4-204ENST00000489898 KRTAP4-1Q9BYQ7 146 aa6.66□□□□□ -1.34
SRSF4-204ENST00000489898 IGLV7-46A0A075B6I9 117 aa6.65□□□□□ -1.34
SRSF4-204ENST00000489898 A0A0B4J2C4 111 aa6.65□□□□□ -1.34
SRSF4-204ENST00000489898 A4D1N5 150 aa6.65□□□□□ -1.34
SRSF4-204ENST00000489898 C9orf118A6NHY6 69 aa6.65□□□□□ -1.34
SRSF4-204ENST00000489898 TAX1BP3O14907 124 aa6.65□□□□□ -1.34
SRSF4-204ENST00000489898 FABP2P12104 132 aa6.65□□□□□ -1.34
SRSF4-204ENST00000489898 PPDPFQ9H3Y8 114 aa6.65□□□□□ -1.34
SRSF4-204ENST00000489898 H3BUT2 72 aa6.64□□□□□ -1.35
SRSF4-204ENST00000489898 SMCPP49901 116 aaPredicted RBP6.64□□□□□ -1.35
SRSF4-204ENST00000489898 LINC00308Q8TCZ7 52 aa6.64□□□□□ -1.35
SRSF4-204ENST00000489898 A0A1B0GWB2 263 aa6.63□□□□□ -1.35
SRSF4-204ENST00000489898 GTF2H5Q6ZYL4 71 aa6.63□□□□□ -1.35
SRSF4-204ENST00000489898 PRO1854Q9UHT4 67 aa6.63□□□□□ -1.35
SRSF4-204ENST00000489898 ZNF706Q9Y5V0 76 aaPredicted RBP6.63□□□□□ -1.35
SRSF4-204ENST00000489898 ETDCA0A1B0GVM5 59 aa6.62□□□□□ -1.35
SRSF4-204ENST00000489898 PSMB2P49721 201 aa6.62□□□□□ -1.35
SRSF4-204ENST00000489898 Q8N377 158 aa6.62□□□□□ -1.35
SRSF4-204ENST00000489898 CFC1BP0CG36 223 aa6.61□□□□□ -1.35
SRSF4-204ENST00000489898 CFC1P0CG37 223 aa6.61□□□□□ -1.35
SRSF4-204ENST00000489898 SPAG11AQ6PDA7 123 aa6.61□□□□□ -1.35
SRSF4-204ENST00000489898 FP248Q71RG6 208 aaPredicted RBP6.61□□□□□ -1.35
SRSF4-204ENST00000489898 TRAV23DV6A0A075B6W5 121 aa6.6□□□□□ -1.35
SRSF4-204ENST00000489898 TRAV13-2A0A0B4J235 113 aa6.6□□□□□ -1.35
SRSF4-204ENST00000489898 A0A1W2PPM0 123 aa6.6□□□□□ -1.35
SRSF4-204ENST00000489898 H7C2G1 150 aa6.6□□□□□ -1.35
SRSF4-204ENST00000489898 RPS29P62273 56 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms