RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 HSBP1L1C9JCN9 74 aa7.24□□□□□ -1.25
SMARCD3-213ENST00000489503 CRYGAP11844 174 aa7.24□□□□□ -1.25
SMARCD3-213ENST00000489503 SMCR5Q8TEV8 140 aa7.24□□□□□ -1.25
SMARCD3-213ENST00000489503 S100A12P80511 92 aa7.23□□□□□ -1.25
SMARCD3-213ENST00000489503 OR13C6PQ8NH95 151 aa7.23□□□□□ -1.25
SMARCD3-213ENST00000489503 ERC2-IT1O76042 136 aa7.22□□□□□ -1.25
SMARCD3-213ENST00000489503 TYMSOSQ8TAI1 123 aa7.22□□□□□ -1.25
SMARCD3-213ENST00000489503 SPRR4Q96PI1 79 aa7.22□□□□□ -1.25
SMARCD3-213ENST00000489503 Q9BRP9 147 aa7.22□□□□□ -1.25
SMARCD3-213ENST00000489503 ZNF73O43830 326 aaPredicted RBP7.21□□□□□ -1.26
SMARCD3-213ENST00000489503 FAM229BQ4G0N7 80 aa7.21□□□□□ -1.26
SMARCD3-213ENST00000489503 Q6ZRX8 168 aa7.21□□□□□ -1.26
SMARCD3-213ENST00000489503 MUSTN1Q8IVN3 82 aa7.21□□□□□ -1.26
SMARCD3-213ENST00000489503 C3orf22Q8N5N4 141 aa7.21□□□□□ -1.26
SMARCD3-213ENST00000489503 PPDPFQ9H3Y8 114 aa7.21□□□□□ -1.26
SMARCD3-213ENST00000489503 TMA7Q9Y2S6 64 aaKnown RBP7.21□□□□□ -1.26
SMARCD3-213ENST00000489503 TSPAN13O95857 204 aa7.19□□□□□ -1.26
SMARCD3-213ENST00000489503 IFITM1P13164 125 aa7.18□□□□□ -1.26
SMARCD3-213ENST00000489503 ZNF706Q9Y5V0 76 aaPredicted RBP7.18□□□□□ -1.26
SMARCD3-213ENST00000489503 GAGE2AQ6NT46 116 aa7.17□□□□□ -1.26
SMARCD3-213ENST00000489503 PAM16Q9Y3D7 125 aa7.17□□□□□ -1.26
SMARCD3-213ENST00000489503 Q6ZVH6 145 aa7.16□□□□□ -1.26
SMARCD3-213ENST00000489503 LINC00518Q8N0U6 118 aa7.16□□□□□ -1.26
SMARCD3-213ENST00000489503 LRP2P98164 4655 aa7.15□□□□□ -1.26
SMARCD3-213ENST00000489503 A6NDN8 102 aa7.15□□□□□ -1.26
SMARCD3-213ENST00000489503 COX8AP10176 69 aa7.15□□□□□ -1.26
SMARCD3-213ENST00000489503 C6orf99Q4VX62 202 aa7.15□□□□□ -1.26
SMARCD3-213ENST00000489503 SPATA45Q537H7 98 aa7.15□□□□□ -1.26
SMARCD3-213ENST00000489503 ST20-AS1Q8NBB2 130 aa7.15□□□□□ -1.26
SMARCD3-213ENST00000489503 COPS9Q8WXC6 57 aa7.15□□□□□ -1.26
SMARCD3-213ENST00000489503 LINC00304Q8N9R0 145 aa7.14□□□□□ -1.27
SMARCD3-213ENST00000489503 C14orf144Q96I85 54 aa7.14□□□□□ -1.27
SMARCD3-213ENST00000489503 JOSD1Q15040 202 aaPredicted RBP7.13□□□□□ -1.27
SMARCD3-213ENST00000489503 LINC00483Q53H64 154 aa7.13□□□□□ -1.27
SMARCD3-213ENST00000489503 C12orf57Q99622 126 aa7.13□□□□□ -1.27
SMARCD3-213ENST00000489503 VAMP8Q9BV40 100 aa7.13□□□□□ -1.27
SMARCD3-213ENST00000489503 CBY1Q9Y3M2 126 aa7.13□□□□□ -1.27
SMARCD3-213ENST00000489503 A4D1N5 150 aa7.12□□□□□ -1.27
SMARCD3-213ENST00000489503 COX7BP24311 80 aa7.12□□□□□ -1.27
SMARCD3-213ENST00000489503 HINT1P49773 126 aaPredicted RBP7.12□□□□□ -1.27
SMARCD3-213ENST00000489503 ELOF1P60002 83 aaKnown RBP7.12□□□□□ -1.27
SMARCD3-213ENST00000489503 UBR4Q5T4S7 5183 aa7.11□□□□□ -1.27
SMARCD3-213ENST00000489503 IGLV9-49A0A0B4J1Y8 123 aa7.11□□□□□ -1.27
SMARCD3-213ENST00000489503 RETNLBQ9BQ08 111 aa7.11□□□□□ -1.27
SMARCD3-213ENST00000489503 LPAP08519 4548 aa7.11□□□□□ -1.27
SMARCD3-213ENST00000489503 MOBPQ13875 183 aa7.1□□□□□ -1.27
SMARCD3-213ENST00000489503 PRR4Q16378 134 aa7.1□□□□□ -1.27
SMARCD3-213ENST00000489503 PYY3Q5JQD4 70 aa7.1□□□□□ -1.27
SMARCD3-213ENST00000489503 Q8NBF4 154 aa7.1□□□□□ -1.27
SMARCD3-213ENST00000489503 SMIM11BQ8TCY0 68 aa7.1□□□□□ -1.27
SMARCD3-213ENST00000489503 HIST1H4GQ99525 98 aa7.1□□□□□ -1.27
SMARCD3-213ENST00000489503 TRAV13-2A0A0B4J235 113 aa7.09□□□□□ -1.27
SMARCD3-213ENST00000489503 DLEU1O43261 78 aa7.09□□□□□ -1.27
SMARCD3-213ENST00000489503 C2orf91Q6ZV80 131 aa7.09□□□□□ -1.27
SMARCD3-213ENST00000489503 SLC25A34Q6PIV7 304 aa7.08□□□□□ -1.28
SMARCD3-213ENST00000489503 DHRS4-AS1Q9P1J3 65 aa7.08□□□□□ -1.28
SMARCD3-213ENST00000489503 A0A1B0GWB2 263 aa7.06□□□□□ -1.28
SMARCD3-213ENST00000489503 C9orf153Q5TBE3 101 aa7.06□□□□□ -1.28
SMARCD3-213ENST00000489503 TRBV7-6A0A0J9YX20 115 aa7.05□□□□□ -1.28
SMARCD3-213ENST00000489503 DEFB105AQ8NG35 78 aa7.05□□□□□ -1.28
SMARCD3-213ENST00000489503 HIGD1BQ9P298 99 aa7.05□□□□□ -1.28
SMARCD3-213ENST00000489503 H7C2G1 150 aa7.03□□□□□ -1.28
SMARCD3-213ENST00000489503 SPRR1BP22528 89 aa7.03□□□□□ -1.28
SMARCD3-213ENST00000489503 Q1RN00 199 aa7.02□□□□□ -1.29
SMARCD3-213ENST00000489503 C4orf48Q5BLP8 95 aa7.02□□□□□ -1.29
SMARCD3-213ENST00000489503 CFC1BP0CG36 223 aa7.01□□□□□ -1.29
SMARCD3-213ENST00000489503 CFC1P0CG37 223 aa7.01□□□□□ -1.29
SMARCD3-213ENST00000489503 LINC01547P58512 204 aaPredicted RBP7.01□□□□□ -1.29
SMARCD3-213ENST00000489503 TAL2Q16559 108 aa7.01□□□□□ -1.29
SMARCD3-213ENST00000489503 SPAG11AQ6PDA7 123 aa7.01□□□□□ -1.29
SMARCD3-213ENST00000489503 FXYD2P54710 66 aa7□□□□□ -1.29
SMARCD3-213ENST00000489503 SSBP3-AS1Q7Z2R9 100 aa7□□□□□ -1.29
SMARCD3-213ENST00000489503 CEND1Q8N111 149 aa6.99□□□□□ -1.29
SMARCD3-213ENST00000489503 RAB37Q96AX2 223 aa6.99□□□□□ -1.29
SMARCD3-213ENST00000489503 IGLV5-48A0A075B6I7 105 aa6.98□□□□□ -1.29
SMARCD3-213ENST00000489503 TEX49A0A1B0GTD5 131 aa6.98□□□□□ -1.29
SMARCD3-213ENST00000489503 VAMP3Q15836 100 aa6.98□□□□□ -1.29
SMARCD3-213ENST00000489503 LINC00575Q6W349 94 aa6.98□□□□□ -1.29
SMARCD3-213ENST00000489503 SMIM29Q86T20 159 aa6.98□□□□□ -1.29
SMARCD3-213ENST00000489503 LAMTOR3Q9UHA4 124 aa6.98□□□□□ -1.29
SMARCD3-213ENST00000489503 A0A0B4J2C4 111 aa6.97□□□□□ -1.29
SMARCD3-213ENST00000489503 SPINK1P00995 79 aa6.97□□□□□ -1.29
SMARCD3-213ENST00000489503 HRCT1Q6UXD1 115 aa6.97□□□□□ -1.29
SMARCD3-213ENST00000489503 NHP2Q9NX24 153 aaKnown RBP6.97□□□□□ -1.29
SMARCD3-213ENST00000489503 IGLV7-46A0A075B6I9 117 aa6.96□□□□□ -1.3
SMARCD3-213ENST00000489503 A0A0G2JQZ4 141 aa6.96□□□□□ -1.3
SMARCD3-213ENST00000489503 SLC25A20O43772 301 aa6.96□□□□□ -1.3
SMARCD3-213ENST00000489503 Q6ZQY7 126 aa6.96□□□□□ -1.3
SMARCD3-213ENST00000489503 Q8N377 158 aa6.96□□□□□ -1.3
SMARCD3-213ENST00000489503 RNF213Q63HN8 5207 aa6.95□□□□□ -1.3
SMARCD3-213ENST00000489503 hADV29S1A0JD25 119 aa6.94□□□□□ -1.3
SMARCD3-213ENST00000489503 K7ERJ3 54 aa6.94□□□□□ -1.3
SMARCD3-213ENST00000489503 CTAG1AP78358 180 aa6.94□□□□□ -1.3
SMARCD3-213ENST00000489503 HSD52Q0P140 79 aa6.94□□□□□ -1.3
SMARCD3-213ENST00000489503 TMEM238LA0A1B0GVL6 79 aa6.93□□□□□ -1.3
SMARCD3-213ENST00000489503 A6NJY4 79 aa6.93□□□□□ -1.3
SMARCD3-213ENST00000489503 BVES-AS1Q5T3Y7 98 aa6.93□□□□□ -1.3
SMARCD3-213ENST00000489503 PRO1933Q9H354 126 aa6.93□□□□□ -1.3
SMARCD3-213ENST00000489503 UQCR10Q9UDW1 63 aa6.93□□□□□ -1.3
SMARCD3-213ENST00000489503 FAM218AQ96MZ4 157 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms