RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 M0R378 163 aa14□□□□□ -0.17
NSMCE4A-211ENST00000489266 C16orf90A8MZG2 172 aa13.99□□□□□ -0.17
NSMCE4A-211ENST00000489266 SETXQ7Z333 2677 aaKnown RBP13.99□□□□□ -0.17
NSMCE4A-211ENST00000489266 NDUFB1O75438 58 aa13.98□□□□□ -0.17
NSMCE4A-211ENST00000489266 DEFB113Q30KQ7 82 aa13.98□□□□□ -0.17
NSMCE4A-211ENST00000489266 TEX15Q9BXT5 2789 aa13.98□□□□□ -0.17
NSMCE4A-211ENST00000489266 PRB2P02812 416 aaPredicted RBP13.97□□□□□ -0.17
NSMCE4A-211ENST00000489266 DSCR10P59022 87 aa13.96□□□□□ -0.17
NSMCE4A-211ENST00000489266 A0A1W2PNM2 257 aa13.96□□□□□ -0.18
NSMCE4A-211ENST00000489266 CHKB-CPT1BH3BT56 60 aa13.96□□□□□ -0.18
NSMCE4A-211ENST00000489266 Q8N377 158 aa13.96□□□□□ -0.18
NSMCE4A-211ENST00000489266 EPG5Q9HCE0 2579 aa13.95□□□□□ -0.18
NSMCE4A-211ENST00000489266 DEFB105AQ8NG35 78 aa13.94□□□□□ -0.18
NSMCE4A-211ENST00000489266 K7EQZ3 153 aa13.93□□□□□ -0.18
NSMCE4A-211ENST00000489266 Q8N9P0 234 aaPredicted RBP13.93□□□□□ -0.18
NSMCE4A-211ENST00000489266 B9D2Q9BPU9 175 aa13.93□□□□□ -0.18
NSMCE4A-211ENST00000489266 LIMD2Q9BT23 127 aa13.93□□□□□ -0.18
NSMCE4A-211ENST00000489266 PRR34Q9NV39 138 aa13.93□□□□□ -0.18
NSMCE4A-211ENST00000489266 X6R8D5 127 aa13.93□□□□□ -0.18
NSMCE4A-211ENST00000489266 ZNF469Q96JG9 3925 aaPredicted RBP13.9□□□□□ -0.18
NSMCE4A-211ENST00000489266 ATP11AUNQ6ZP68 121 aa13.89□□□□□ -0.19
NSMCE4A-211ENST00000489266 HCG22E2RYF7 251 aa13.88□□□□□ -0.19
NSMCE4A-211ENST00000489266 SPTSSBQ8NFR3 76 aa13.88□□□□□ -0.19
NSMCE4A-211ENST00000489266 APCP25054 2843 aa13.88□□□□□ -0.19
NSMCE4A-211ENST00000489266 NDUFS5O43920 106 aa13.87□□□□□ -0.19
NSMCE4A-211ENST00000489266 Q8NBF4 154 aa13.87□□□□□ -0.19
NSMCE4A-211ENST00000489266 KRTAP1-3Q8IUG1 177 aa13.87□□□□□ -0.19
NSMCE4A-211ENST00000489266 PRR15LQ9BU68 103 aa13.87□□□□□ -0.19
NSMCE4A-211ENST00000489266 C1orf137Q5JT78 98 aa13.85□□□□□ -0.19
NSMCE4A-211ENST00000489266 LELP1Q5T871 98 aa13.85□□□□□ -0.19
NSMCE4A-211ENST00000489266 LCA10Q71F78 164 aa13.85□□□□□ -0.19
NSMCE4A-211ENST00000489266 PHF5AQ7RTV0 110 aaKnown RBP13.85□□□□□ -0.19
NSMCE4A-211ENST00000489266 SPRR4Q96PI1 79 aa13.85□□□□□ -0.19
NSMCE4A-211ENST00000489266 KCNQ1DNQ9H478 68 aa13.85□□□□□ -0.19
NSMCE4A-211ENST00000489266 A6NN06 94 aa13.84□□□□□ -0.19
NSMCE4A-211ENST00000489266 TNP2Q05952 138 aa13.84□□□□□ -0.19
NSMCE4A-211ENST00000489266 EGFEM1PQ0D2K5 195 aa13.84□□□□□ -0.19
NSMCE4A-211ENST00000489266 LINC00208Q96KT6 92 aa13.84□□□□□ -0.19
NSMCE4A-211ENST00000489266 FN1P02751 2386 aaKnown RBP13.84□□□□□ -0.19
NSMCE4A-211ENST00000489266 MP68P56378 58 aa13.83□□□□□ -0.2
NSMCE4A-211ENST00000489266 SPANXA2-OT1Q8N9U9 137 aa13.82□□□□□ -0.2
NSMCE4A-211ENST00000489266 CAMK2N2Q96S95 79 aa13.82□□□□□ -0.2
NSMCE4A-211ENST00000489266 SONP18583 2426 aaKnown RBP13.82□□□□□ -0.2
NSMCE4A-211ENST00000489266 DNAJC9-AS1A6NH13 148 aa13.82□□□□□ -0.2
NSMCE4A-211ENST00000489266 Q9BRP9 147 aa13.82□□□□□ -0.2
NSMCE4A-211ENST00000489266 ITPR3Q14573 2671 aa13.81□□□□□ -0.2
NSMCE4A-211ENST00000489266 Q75L30 129 aa13.81□□□□□ -0.2
NSMCE4A-211ENST00000489266 NIPBLQ6KC79 2804 aaeCLIP13.8□□□□□ -0.2
NSMCE4A-211ENST00000489266 CCDC168Q8NDH2 2452 aa13.77□□□□□ -0.21
NSMCE4A-211ENST00000489266 LOC101927531A0A1B0GV80 90 aa13.75□□□□□ -0.21
NSMCE4A-211ENST00000489266 A6NED7 52 aa13.75□□□□□ -0.21
NSMCE4A-211ENST00000489266 DHRS4-AS1Q9P1J3 65 aa13.73□□□□□ -0.21
NSMCE4A-211ENST00000489266 FLNAP21333 2647 aaKnown RBP13.72□□□□□ -0.21
NSMCE4A-211ENST00000489266 DEFB4AO15263 64 aa13.72□□□□□ -0.21
NSMCE4A-211ENST00000489266 WFDC13Q8IUB5 93 aa13.71□□□□□ -0.21
NSMCE4A-211ENST00000489266 NF1P21359 2839 aa13.71□□□□□ -0.22
NSMCE4A-211ENST00000489266 DEFB116Q30KQ4 102 aa13.71□□□□□ -0.22
NSMCE4A-211ENST00000489266 CDC42SE1Q9NRR8 79 aa13.7□□□□□ -0.22
NSMCE4A-211ENST00000489266 TENM4Q6N022 2769 aa13.69□□□□□ -0.22
NSMCE4A-211ENST00000489266 NBEAL2Q6ZNJ1 2754 aa13.69□□□□□ -0.22
NSMCE4A-211ENST00000489266 Q6ZRX8 168 aa13.69□□□□□ -0.22
NSMCE4A-211ENST00000489266 C7orf65Q6ZTY9 151 aa13.68□□□□□ -0.22
NSMCE4A-211ENST00000489266 C7orf33Q8WU49 177 aa13.68□□□□□ -0.22
NSMCE4A-211ENST00000489266 H3BPC8 53 aa13.68□□□□□ -0.22
NSMCE4A-211ENST00000489266 IGKV2D-24A0A075B6R9 120 aa13.67□□□□□ -0.22
NSMCE4A-211ENST00000489266 KRTAP26-1Q6PEX3 210 aa13.67□□□□□ -0.22
NSMCE4A-211ENST00000489266 NKAPP1Q8N9T2 125 aa13.67□□□□□ -0.22
NSMCE4A-211ENST00000489266 APOC4P55056 127 aa13.66□□□□□ -0.22
NSMCE4A-211ENST00000489266 H0Y9P7 68 aa13.66□□□□□ -0.22
NSMCE4A-211ENST00000489266 C15orf56Q8N910 161 aa13.65□□□□□ -0.22
NSMCE4A-211ENST00000489266 GCN1Q92616 2671 aaKnown RBP13.65□□□□□ -0.22
NSMCE4A-211ENST00000489266 ACANP16112 2415 aa13.64□□□□□ -0.23
NSMCE4A-211ENST00000489266 SERTAD4-AS1Q5TG53 156 aa13.64□□□□□ -0.23
NSMCE4A-211ENST00000489266 WFDC10BQ8IUB3 73 aa13.64□□□□□ -0.23
NSMCE4A-211ENST00000489266 KRTAP4-16G5E9R7 235 aaPredicted RBP13.63□□□□□ -0.23
NSMCE4A-211ENST00000489266 C9orf163Q8N9P6 203 aa13.63□□□□□ -0.23
NSMCE4A-211ENST00000489266 KRTAP29-1A8MX34 341 aaPredicted RBP13.63□□□□□ -0.23
NSMCE4A-211ENST00000489266 DEFB135Q30KP9 77 aa13.63□□□□□ -0.23
NSMCE4A-211ENST00000489266 SETD2Q9BYW2 2564 aaPredicted RBP13.62□□□□□ -0.23
NSMCE4A-211ENST00000489266 C11orf45Q8TAV5 145 aa13.62□□□□□ -0.23
NSMCE4A-211ENST00000489266 PDZD2O15018 2839 aa13.61□□□□□ -0.23
NSMCE4A-211ENST00000489266 HTN3P15516 51 aa13.61□□□□□ -0.23
NSMCE4A-211ENST00000489266 COA5Q86WW8 74 aa13.61□□□□□ -0.23
NSMCE4A-211ENST00000489266 KRTAP1-1Q07627 177 aa13.6□□□□□ -0.23
NSMCE4A-211ENST00000489266 MOBPQ13875 183 aa13.6□□□□□ -0.23
NSMCE4A-211ENST00000489266 MTORP42345 2549 aa13.58□□□□□ -0.24
NSMCE4A-211ENST00000489266 C4orf48Q5BLP8 95 aa13.58□□□□□ -0.24
NSMCE4A-211ENST00000489266 ITPR2Q14571 2701 aa13.58□□□□□ -0.24
NSMCE4A-211ENST00000489266 SPART-AS1P0CW21 52 aa13.57□□□□□ -0.24
NSMCE4A-211ENST00000489266 Q8NAQ8 132 aa13.57□□□□□ -0.24
NSMCE4A-211ENST00000489266 SPRR1AP35321 89 aa13.56□□□□□ -0.24
NSMCE4A-211ENST00000489266 LINC00476Q8WZB0 136 aa13.56□□□□□ -0.24
NSMCE4A-211ENST00000489266 ANK3Q12955 4377 aaKnown RBP13.56□□□□□ -0.24
NSMCE4A-211ENST00000489266 RPL37AP8A6NKH3 93 aa13.54□□□□□ -0.24
NSMCE4A-211ENST00000489266 J3QKU1 62 aa13.54□□□□□ -0.24
NSMCE4A-211ENST00000489266 HELZ2Q9BYK8 2649 aaKnown RBP13.53□□□□□ -0.24
NSMCE4A-211ENST00000489266 PLA2G2DQ9UNK4 145 aa13.52□□□□□ -0.24
NSMCE4A-211ENST00000489266 A0A0G2JQZ4 141 aa13.52□□□□□ -0.25
NSMCE4A-211ENST00000489266 A0A1W2PNN7 141 aa13.52□□□□□ -0.25
NSMCE4A-211ENST00000489266 PLAC8Q9NZF1 115 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms