RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 COX19Q49B96 90 aa8.45□□□□□ -1.06
USP48-210ENST00000489108 C1orf195Q5TG92 126 aa8.45□□□□□ -1.06
USP48-210ENST00000489108 CD164Q04900 197 aa8.44□□□□□ -1.06
USP48-210ENST00000489108 SLC25A34Q6PIV7 304 aa8.44□□□□□ -1.06
USP48-210ENST00000489108 SEC11CQ9BY50 192 aa8.44□□□□□ -1.06
USP48-210ENST00000489108 LAMTOR3Q9UHA4 124 aa8.44□□□□□ -1.06
USP48-210ENST00000489108 TRAV12-1A0A0B4J245 112 aa8.42□□□□□ -1.06
USP48-210ENST00000489108 KRTAP19-1Q8IUB9 90 aa8.42□□□□□ -1.06
USP48-210ENST00000489108 NDUFC2O95298 119 aa8.4□□□□□ -1.06
USP48-210ENST00000489108 TSPEAR-AS2P59090 65 aa8.4□□□□□ -1.06
USP48-210ENST00000489108 Q5XG85 94 aa8.4□□□□□ -1.06
USP48-210ENST00000489108 MIEN1Q9BRT3 115 aa8.4□□□□□ -1.06
USP48-210ENST00000489108 RPS10P5Q9NQ39 176 aa8.4□□□□□ -1.06
USP48-210ENST00000489108 HINT1P49773 126 aaPredicted RBP8.39□□□□□ -1.07
USP48-210ENST00000489108 IFI27L1Q96BM0 104 aa8.39□□□□□ -1.07
USP48-210ENST00000489108 PRO1933Q9H354 126 aa8.39□□□□□ -1.07
USP48-210ENST00000489108 Q1RN00 199 aa8.38□□□□□ -1.07
USP48-210ENST00000489108 SMIM29Q86T20 159 aa8.37□□□□□ -1.07
USP48-210ENST00000489108 EIF4EBP3O60516 100 aaPredicted RBP8.36□□□□□ -1.07
USP48-210ENST00000489108 TRAPPC1Q9Y5R8 145 aa8.36□□□□□ -1.07
USP48-210ENST00000489108 A0A0G2JQZ4 141 aa8.35□□□□□ -1.07
USP48-210ENST00000489108 LEPROTO15243 131 aa8.35□□□□□ -1.07
USP48-210ENST00000489108 NPC2P61916 151 aa8.35□□□□□ -1.07
USP48-210ENST00000489108 SOSTDC1Q6X4U4 206 aa8.35□□□□□ -1.07
USP48-210ENST00000489108 COMMD7Q86VX2 200 aa8.35□□□□□ -1.07
USP48-210ENST00000489108 DEFB105AQ8NG35 78 aa8.35□□□□□ -1.07
USP48-210ENST00000489108 DHRS4-AS1Q9P1J3 65 aa8.35□□□□□ -1.07
USP48-210ENST00000489108 SYNE2Q8WXH0 6885 aaKnown RBP8.35□□□□□ -1.07
USP48-210ENST00000489108 MACF1Q9UPN3 7388 aaKnown RBP8.34□□□□□ -1.07
USP48-210ENST00000489108 TMEM218A2RU14 115 aa8.34□□□□□ -1.07
USP48-210ENST00000489108 AKR1D1P51857 326 aa8.34□□□□□ -1.07
USP48-210ENST00000489108 TAL2Q16559 108 aa8.34□□□□□ -1.07
USP48-210ENST00000489108 LCE2BO14633 110 aa8.33□□□□□ -1.08
USP48-210ENST00000489108 IFITM2Q01629 132 aa8.33□□□□□ -1.08
USP48-210ENST00000489108 J3QQQ9 107 aa8.31□□□□□ -1.08
USP48-210ENST00000489108 CBY1Q9Y3M2 126 aa8.31□□□□□ -1.08
USP48-210ENST00000489108 RHEBQ15382 184 aa8.3□□□□□ -1.08
USP48-210ENST00000489108 ADAMTSL4-AS1Q5T5F5 129 aa8.3□□□□□ -1.08
USP48-210ENST00000489108 ATP11AUNQ6ZP68 121 aa8.3□□□□□ -1.08
USP48-210ENST00000489108 TEX49A0A1B0GTD5 131 aa8.29□□□□□ -1.08
USP48-210ENST00000489108 MT2AP02795 61 aa8.29□□□□□ -1.08
USP48-210ENST00000489108 OR13C6PQ8NH95 151 aa8.29□□□□□ -1.08
USP48-210ENST00000489108 H0Y8G0 127 aa8.28□□□□□ -1.08
USP48-210ENST00000489108 C20orf202A1L168 122 aa8.27□□□□□ -1.09
USP48-210ENST00000489108 NMUP48645 174 aa8.27□□□□□ -1.09
USP48-210ENST00000489108 CHCHD1Q96BP2 118 aaKnown RBP8.27□□□□□ -1.09
USP48-210ENST00000489108 COX7BP24311 80 aa8.26□□□□□ -1.09
USP48-210ENST00000489108 ELOF1P60002 83 aaKnown RBP8.26□□□□□ -1.09
USP48-210ENST00000489108 UQCC3Q6UW78 93 aa8.26□□□□□ -1.09
USP48-210ENST00000489108 TCL1BO95988 128 aa8.25□□□□□ -1.09
USP48-210ENST00000489108 LGALS3P17931 250 aaKnown RBP8.25□□□□□ -1.09
USP48-210ENST00000489108 CLLU1Q5K131 121 aa8.25□□□□□ -1.09
USP48-210ENST00000489108 A0A0J9YXY3 114 aa8.24□□□□□ -1.09
USP48-210ENST00000489108 Q75L30 129 aa8.24□□□□□ -1.09
USP48-210ENST00000489108 MT1FP04733 61 aa8.23□□□□□ -1.09
USP48-210ENST00000489108 PCP2Q8IVA1 136 aa8.23□□□□□ -1.09
USP48-210ENST00000489108 KRTAP9-3Q9BYQ3 159 aa8.23□□□□□ -1.09
USP48-210ENST00000489108 C6orf99Q4VX62 202 aa8.22□□□□□ -1.09
USP48-210ENST00000489108 C10orf91Q5T1B1 145 aa8.22□□□□□ -1.09
USP48-210ENST00000489108 OBSCN-AS1Q96MR7 158 aa8.22□□□□□ -1.09
USP48-210ENST00000489108 HERVK_113P61574 105 aa8.21□□□□□ -1.1
USP48-210ENST00000489108 SPANXCQ9NY87 97 aa8.21□□□□□ -1.1
USP48-210ENST00000489108 PLNP26678 52 aa8.2□□□□□ -1.1
USP48-210ENST00000489108 LINC00308Q8TCZ7 52 aa8.19□□□□□ -1.1
USP48-210ENST00000489108 SPANXDQ9BXN6 97 aa8.19□□□□□ -1.1
USP48-210ENST00000489108 IGLV5-48A0A075B6I7 105 aa8.18□□□□□ -1.1
USP48-210ENST00000489108 HSBP1O75506 76 aa8.18□□□□□ -1.1
USP48-210ENST00000489108 PMCHL2Q9BQD1 86 aa8.18□□□□□ -1.1
USP48-210ENST00000489108 DPM2O94777 84 aa8.17□□□□□ -1.1
USP48-210ENST00000489108 KRTAP10-10P60014 251 aa8.17□□□□□ -1.1
USP48-210ENST00000489108 TRBV20-1A0A075B6N2 111 aa8.16□□□□□ -1.1
USP48-210ENST00000489108 LITAFQ99732 161 aa8.15□□□□□ -1.1
USP48-210ENST00000489108 LEPROTL1O95214 131 aa8.14□□□□□ -1.11
USP48-210ENST00000489108 IGKCP01834 107 aa8.14□□□□□ -1.11
USP48-210ENST00000489108 LINC00846Q9NV44 126 aa8.13□□□□□ -1.11
USP48-210ENST00000489108 TRBV7-6A0A0J9YX20 115 aa8.12□□□□□ -1.11
USP48-210ENST00000489108 Q96NJ1 140 aa8.12□□□□□ -1.11
USP48-210ENST00000489108 KRTAP19-6Q3LI70 58 aa8.11□□□□□ -1.11
USP48-210ENST00000489108 LINC00518Q8N0U6 118 aa8.11□□□□□ -1.11
USP48-210ENST00000489108 A0A1B0GWB2 263 aa8.1□□□□□ -1.11
USP48-210ENST00000489108 E9PLD3 99 aa8.1□□□□□ -1.11
USP48-210ENST00000489108 KRTAP6-3Q3LI67 103 aa8.09□□□□□ -1.11
USP48-210ENST00000489108 TIMM17BO60830 172 aa8.08□□□□□ -1.12
USP48-210ENST00000489108 FABP4P15090 132 aa8.08□□□□□ -1.12
USP48-210ENST00000489108 TRBV7-7A0A0K0K1E9 115 aa8.07□□□□□ -1.12
USP48-210ENST00000489108 HSPB8Q9UJY1 196 aa8.06□□□□□ -1.12
USP48-210ENST00000489108 FAM236DA0A1B0GTK5 79 aa8.05□□□□□ -1.12
USP48-210ENST00000489108 FAM236CP0DP71 79 aa8.05□□□□□ -1.12
USP48-210ENST00000489108 LINC00310P59036 64 aa8.05□□□□□ -1.12
USP48-210ENST00000489108 C20orf166-AS1Q96NR2 134 aa8.05□□□□□ -1.12
USP48-210ENST00000489108 F8WEM9 126 aa8.04□□□□□ -1.12
USP48-210ENST00000489108 SERF1AO75920 110 aa8.04□□□□□ -1.12
USP48-210ENST00000489108 IGFL1Q6UW32 110 aa8.04□□□□□ -1.12
USP48-210ENST00000489108 YPEL4Q96NS1 127 aa8.04□□□□□ -1.12
USP48-210ENST00000489108 A8MUU9 505 aa8.03□□□□□ -1.12
USP48-210ENST00000489108 A4D1N5 150 aa8.01□□□□□ -1.13
USP48-210ENST00000489108 A6NDN8 102 aa8.01□□□□□ -1.13
USP48-210ENST00000489108 Q6JHZ5 121 aa8.01□□□□□ -1.13
USP48-210ENST00000489108 APOC3P02656 99 aa8□□□□□ -1.13
USP48-210ENST00000489108 CLEC2BQ92478 149 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms