RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 KRTAP4-16G5E9R7 235 aaPredicted RBP9.93□□□□□ -0.82
CLDN11-208ENST00000488989 ZNF73O43830 326 aaPredicted RBP9.93□□□□□ -0.82
CLDN11-208ENST00000488989 CDK2AP2O75956 126 aa9.93□□□□□ -0.82
CLDN11-208ENST00000488989 Q1RN00 199 aa9.93□□□□□ -0.82
CLDN11-208ENST00000488989 REG3GQ6UW15 175 aa9.93□□□□□ -0.82
CLDN11-208ENST00000488989 C6orf99Q4VX62 202 aa9.92□□□□□ -0.82
CLDN11-208ENST00000488989 DIRC1Q969H9 104 aa9.92□□□□□ -0.82
CLDN11-208ENST00000488989 TRBV7-6A0A0J9YX20 115 aa9.91□□□□□ -0.82
CLDN11-208ENST00000488989 C9orf118A6NHY6 69 aa9.91□□□□□ -0.82
CLDN11-208ENST00000488989 HSPG2P98160 4391 aa9.91□□□□□ -0.82
CLDN11-208ENST00000488989 TRIAP1O43715 76 aa9.9□□□□□ -0.82
CLDN11-208ENST00000488989 PSORS1C2Q9UIG4 136 aa9.9□□□□□ -0.82
CLDN11-208ENST00000488989 VPS13BQ7Z7G8 4022 aa9.9□□□□□ -0.82
CLDN11-208ENST00000488989 BCE1O60756 84 aa9.88□□□□□ -0.83
CLDN11-208ENST00000488989 FAT1Q14517 4588 aa9.87□□□□□ -0.83
CLDN11-208ENST00000488989 B5MCH6 92 aa9.87□□□□□ -0.83
CLDN11-208ENST00000488989 PSMB2P49721 201 aa9.87□□□□□ -0.83
CLDN11-208ENST00000488989 ELOF1P60002 83 aaKnown RBP9.87□□□□□ -0.83
CLDN11-208ENST00000488989 ETDCA0A1B0GVM5 59 aa9.86□□□□□ -0.83
CLDN11-208ENST00000488989 H0YGX0 51 aa9.86□□□□□ -0.83
CLDN11-208ENST00000488989 H3BUT2 72 aa9.86□□□□□ -0.83
CLDN11-208ENST00000488989 VAMP3Q15836 100 aa9.86□□□□□ -0.83
CLDN11-208ENST00000488989 NAA38Q9BRA0 125 aaKnown RBP9.86□□□□□ -0.83
CLDN11-208ENST00000488989 H0Y9J4 135 aa9.85□□□□□ -0.83
CLDN11-208ENST00000488989 COX6CP09669 75 aa9.85□□□□□ -0.83
CLDN11-208ENST00000488989 COX7BP24311 80 aa9.85□□□□□ -0.83
CLDN11-208ENST00000488989 KRTAP13-1Q8IUC0 172 aa9.85□□□□□ -0.83
CLDN11-208ENST00000488989 LINC00528Q8N1L1 170 aa9.85□□□□□ -0.83
CLDN11-208ENST00000488989 C1orf137Q5JT78 98 aa9.84□□□□□ -0.83
CLDN11-208ENST00000488989 Q6ZRX8 168 aa9.84□□□□□ -0.83
CLDN11-208ENST00000488989 BIRC6Q9NR09 4857 aa9.83□□□□□ -0.84
CLDN11-208ENST00000488989 KIAA1109Q2LD37 5005 aa9.83□□□□□ -0.84
CLDN11-208ENST00000488989 A0A1W2PPM0 123 aa9.83□□□□□ -0.84
CLDN11-208ENST00000488989 FAM19A1Q7Z5A9 133 aa9.83□□□□□ -0.84
CLDN11-208ENST00000488989 SMR3BP02814 79 aaPredicted RBP9.82□□□□□ -0.84
CLDN11-208ENST00000488989 INAFM2P0DMQ5 153 aa9.82□□□□□ -0.84
CLDN11-208ENST00000488989 LYRM7Q5U5X0 104 aa9.82□□□□□ -0.84
CLDN11-208ENST00000488989 SCGB1C2P0DMR2 95 aa9.81□□□□□ -0.84
CLDN11-208ENST00000488989 LINC00575Q6W349 94 aa9.81□□□□□ -0.84
CLDN11-208ENST00000488989 A0A1B0GX51 115 aa9.8□□□□□ -0.84
CLDN11-208ENST00000488989 IGLV7-43P04211 117 aa9.8□□□□□ -0.84
CLDN11-208ENST00000488989 PRLHP81277 87 aa9.8□□□□□ -0.84
CLDN11-208ENST00000488989 FAM218AQ96MZ4 157 aa9.8□□□□□ -0.84
CLDN11-208ENST00000488989 Q9BRP9 147 aa9.8□□□□□ -0.84
CLDN11-208ENST00000488989 FABP2P12104 132 aa9.79□□□□□ -0.84
CLDN11-208ENST00000488989 UBE2AP49459 152 aa9.79□□□□□ -0.84
CLDN11-208ENST00000488989 RPL37AP61513 92 aaKnown RBP9.79□□□□□ -0.84
CLDN11-208ENST00000488989 CLEC2BQ92478 149 aa9.79□□□□□ -0.84
CLDN11-208ENST00000488989 DHRS4-AS1Q9P1J3 65 aa9.79□□□□□ -0.84
CLDN11-208ENST00000488989 ZNF861PO60384 105 aa9.78□□□□□ -0.84
CLDN11-208ENST00000488989 KRTAP10-4P60372 401 aaPredicted RBP9.78□□□□□ -0.84
CLDN11-208ENST00000488989 SMCR5Q8TEV8 140 aa9.78□□□□□ -0.84
CLDN11-208ENST00000488989 PKHD1L1Q86WI1 4243 aa9.78□□□□□ -0.84
CLDN11-208ENST00000488989 TRBV20-1A0A075B6N2 111 aa9.77□□□□□ -0.85
CLDN11-208ENST00000488989 LST1O00453 97 aa9.77□□□□□ -0.85
CLDN11-208ENST00000488989 TCL1BO95988 128 aa9.76□□□□□ -0.85
CLDN11-208ENST00000488989 hADV29S1A0JD25 119 aa9.75□□□□□ -0.85
CLDN11-208ENST00000488989 SLC25A20O43772 301 aa9.75□□□□□ -0.85
CLDN11-208ENST00000488989 ERC2-IT1O76042 136 aa9.74□□□□□ -0.85
CLDN11-208ENST00000488989 TRACP01848 142 aa9.74□□□□□ -0.85
CLDN11-208ENST00000488989 HIGD2AQ9BW72 106 aa9.74□□□□□ -0.85
CLDN11-208ENST00000488989 FAM229AH3BQW9 127 aa9.73□□□□□ -0.85
CLDN11-208ENST00000488989 ATXN8Q156A1 80 aa9.73□□□□□ -0.85
CLDN11-208ENST00000488989 SPCS1Q9Y6A9 102 aa9.73□□□□□ -0.85
CLDN11-208ENST00000488989 SNCGO76070 127 aa9.72□□□□□ -0.85
CLDN11-208ENST00000488989 PLA2G1BP04054 148 aaKnown RBP9.71□□□□□ -0.86
CLDN11-208ENST00000488989 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.71□□□□□ -0.86
CLDN11-208ENST00000488989 Q8N1X5 172 aa9.71□□□□□ -0.86
CLDN11-208ENST00000488989 KRTAP17-1Q9BYP8 105 aa9.71□□□□□ -0.86
CLDN11-208ENST00000488989 K7EP34 96 aa9.7□□□□□ -0.86
CLDN11-208ENST00000488989 Q5VSD8 79 aa9.69□□□□□ -0.86
CLDN11-208ENST00000488989 DNAL4O96015 105 aa9.68□□□□□ -0.86
CLDN11-208ENST00000488989 SPINK6Q6UWN8 80 aa9.68□□□□□ -0.86
CLDN11-208ENST00000488989 Q6ZQY7 126 aa9.68□□□□□ -0.86
CLDN11-208ENST00000488989 SRRM2Q9UQ35 2752 aaKnown RBP9.68□□□□□ -0.86
CLDN11-208ENST00000488989 IGLV5-48A0A075B6I7 105 aa9.67□□□□□ -0.86
CLDN11-208ENST00000488989 A0A1B0GV90 55 aa9.67□□□□□ -0.86
CLDN11-208ENST00000488989 LINC01547P58512 204 aaPredicted RBP9.67□□□□□ -0.86
CLDN11-208ENST00000488989 OCIAD2Q56VL3 154 aa9.67□□□□□ -0.86
CLDN11-208ENST00000488989 H3BMG7 143 aa9.66□□□□□ -0.86
CLDN11-208ENST00000488989 GTF2H5Q6ZYL4 71 aa9.66□□□□□ -0.86
CLDN11-208ENST00000488989 ST20-AS1Q8NBB2 130 aa9.66□□□□□ -0.86
CLDN11-208ENST00000488989 SPRR4Q96PI1 79 aa9.65□□□□□ -0.86
CLDN11-208ENST00000488989 ZNF706Q9Y5V0 76 aaPredicted RBP9.65□□□□□ -0.86
CLDN11-208ENST00000488989 HERC2O95714 4834 aa9.64□□□□□ -0.87
CLDN11-208ENST00000488989 SPRR1BP22528 89 aa9.64□□□□□ -0.87
CLDN11-208ENST00000488989 PPDPFLQ8WWR9 84 aa9.64□□□□□ -0.87
CLDN11-208ENST00000488989 H3BQ85 93 aa9.63□□□□□ -0.87
CLDN11-208ENST00000488989 GHRHP01286 108 aa9.63□□□□□ -0.87
CLDN11-208ENST00000488989 ORMDL1Q9P0S3 153 aa9.63□□□□□ -0.87
CLDN11-208ENST00000488989 LINC00483Q53H64 154 aa9.62□□□□□ -0.87
CLDN11-208ENST00000488989 Q8N377 158 aa9.62□□□□□ -0.87
CLDN11-208ENST00000488989 TEX49A0A1B0GTD5 131 aa9.61□□□□□ -0.87
CLDN11-208ENST00000488989 C9JAW5 83 aa9.61□□□□□ -0.87
CLDN11-208ENST00000488989 LINC01600Q96MT4 127 aa9.6□□□□□ -0.87
CLDN11-208ENST00000488989 H3BT86 120 aa9.59□□□□□ -0.87
CLDN11-208ENST00000488989 TMEM256-PLSCR3K7ERE1 68 aa9.59□□□□□ -0.87
CLDN11-208ENST00000488989 KRTAP1-4P0C5Y4 121 aa9.59□□□□□ -0.87
CLDN11-208ENST00000488989 BAALC-AS2P0C853 105 aa9.59□□□□□ -0.87
CLDN11-208ENST00000488989 UBE2V1Q13404 147 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms