RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 S100A3P33764 101 aa1.16□□□□□ -2.22
PRPF4-203ENST00000488937 UBE2DNLQ8IWF7 75 aa1.16□□□□□ -2.22
PRPF4-203ENST00000488937 C10orf95Q9H7T3 257 aa1.16□□□□□ -2.22
PRPF4-203ENST00000488937 FBN3Q75N90 2809 aa1.16□□□□□ -2.22
PRPF4-203ENST00000488937 SPTBN4Q9H254 2564 aa1.16□□□□□ -2.22
PRPF4-203ENST00000488937 BRCA2P51587 3418 aa1.16□□□□□ -2.22
PRPF4-203ENST00000488937 FAM208BQ5VWN6 2430 aa1.16□□□□□ -2.22
PRPF4-203ENST00000488937 MKI67P46013 3256 aaKnown RBP1.16□□□□□ -2.22
PRPF4-203ENST00000488937 BPTFQ12830 3046 aa1.15□□□□□ -2.22
PRPF4-203ENST00000488937 LAMA2P24043 3122 aaKnown RBP1.15□□□□□ -2.22
PRPF4-203ENST00000488937 TPRP12270 2363 aaKnown RBP1.15□□□□□ -2.22
PRPF4-203ENST00000488937 ANKRD50Q9ULJ7 1429 aa1.15□□□□□ -2.22
PRPF4-203ENST00000488937 NRXN3Q9Y4C0 1643 aa1.15□□□□□ -2.22
PRPF4-203ENST00000488937 NDUFB1O75438 58 aa1.15□□□□□ -2.23
PRPF4-203ENST00000488937 URB1O60287 2271 aaKnown RBP1.15□□□□□ -2.23
PRPF4-203ENST00000488937 GCN1Q92616 2671 aaKnown RBP1.15□□□□□ -2.23
PRPF4-203ENST00000488937 OTOGLQ3ZCN5 2332 aa1.15□□□□□ -2.23
PRPF4-203ENST00000488937 REV3LO60673 3130 aa1.14□□□□□ -2.23
PRPF4-203ENST00000488937 LMO7Q8WWI1 1683 aa1.14□□□□□ -2.23
PRPF4-203ENST00000488937 HELZ2Q9BYK8 2649 aaKnown RBP1.14□□□□□ -2.23
PRPF4-203ENST00000488937 A0A087WXM4 84 aa1.14□□□□□ -2.23
PRPF4-203ENST00000488937 SSBP3-AS1Q7Z2R9 100 aa1.14□□□□□ -2.23
PRPF4-203ENST00000488937 MYO18BQ8IUG5 2567 aa1.13□□□□□ -2.23
PRPF4-203ENST00000488937 CNOT1A5YKK6 2376 aaKnown RBP1.13□□□□□ -2.23
PRPF4-203ENST00000488937 CDC42BPAQ5VT25 1732 aa1.13□□□□□ -2.23
PRPF4-203ENST00000488937 FMN2Q9NZ56 1722 aa1.13□□□□□ -2.23
PRPF4-203ENST00000488937 ZFHX4Q86UP3 3567 aa1.13□□□□□ -2.23
PRPF4-203ENST00000488937 SPTA1P02549 2419 aa1.13□□□□□ -2.23
PRPF4-203ENST00000488937 DEFB112Q30KQ8 113 aa1.13□□□□□ -2.23
PRPF4-203ENST00000488937 SPINK9Q5DT21 86 aa1.13□□□□□ -2.23
PRPF4-203ENST00000488937 HILPDAQ9Y5L2 63 aa1.13□□□□□ -2.23
PRPF4-203ENST00000488937 ABCC6O95255 1503 aa1.13□□□□□ -2.23
PRPF4-203ENST00000488937 CACNA1HO95180 2353 aa1.13□□□□□ -2.23
PRPF4-203ENST00000488937 NCOR2Q9Y618 2525 aa1.13□□□□□ -2.23
PRPF4-203ENST00000488937 GVINP1Q7Z2Y8 2422 aa1.13□□□□□ -2.23
PRPF4-203ENST00000488937 RIF1Q5UIP0 2472 aaKnown RBP1.12□□□□□ -2.23
PRPF4-203ENST00000488937 HTTP42858 3142 aa1.12□□□□□ -2.23
PRPF4-203ENST00000488937 I3L2K1 104 aa1.12□□□□□ -2.23
PRPF4-203ENST00000488937 DEFB123Q8N688 67 aa1.12□□□□□ -2.23
PRPF4-203ENST00000488937 PTPRZ1P23471 2315 aaPredicted RBP1.12□□□□□ -2.23
PRPF4-203ENST00000488937 CFAP47Q6ZTR5 3102 aa1.12□□□□□ -2.23
PRPF4-203ENST00000488937 CFAP54Q96N23 3096 aa1.12□□□□□ -2.23
PRPF4-203ENST00000488937 WDR87Q6ZQQ6 2873 aa1.11□□□□□ -2.23
PRPF4-203ENST00000488937 USP24Q9UPU5 2620 aa1.11□□□□□ -2.23
PRPF4-203ENST00000488937 ALS2Q96Q42 1657 aa1.11□□□□□ -2.23
PRPF4-203ENST00000488937 PRUNE2Q8WUY3 3088 aa1.11□□□□□ -2.23
PRPF4-203ENST00000488937 C3orf79P0CE67 100 aa1.11□□□□□ -2.23
PRPF4-203ENST00000488937 GAFA1Q96PS6 74 aa1.11□□□□□ -2.23
PRPF4-203ENST00000488937 ITPR1Q14643 2758 aa1.11□□□□□ -2.23
PRPF4-203ENST00000488937 GOLGA4Q13439 2230 aaKnown RBP1.11□□□□□ -2.23
PRPF4-203ENST00000488937 MYO9AB2RTY4 2548 aa1.11□□□□□ -2.23
PRPF4-203ENST00000488937 ZFYVE26Q68DK2 2539 aa1.11□□□□□ -2.23
PRPF4-203ENST00000488937 C5orf42Q9H799 3197 aa1.1□□□□□ -2.23
PRPF4-203ENST00000488937 FXYD6-FXYD2A0A087WZ82 144 aa1.1□□□□□ -2.23
PRPF4-203ENST00000488937 A0A0D9SG42 100 aa1.1□□□□□ -2.23
PRPF4-203ENST00000488937 H3BVH4 76 aa1.1□□□□□ -2.23
PRPF4-203ENST00000488937 ARL14EPLP0DKL9 152 aa1.1□□□□□ -2.23
PRPF4-203ENST00000488937 NREPQ16612 68 aa1.1□□□□□ -2.23
PRPF4-203ENST00000488937 CLTCL1P53675 1640 aa1.1□□□□□ -2.23
PRPF4-203ENST00000488937 FAM186AA6NE01 2351 aa1.1□□□□□ -2.23
PRPF4-203ENST00000488937 DCHS1Q96JQ0 3298 aa1.09□□□□□ -2.23
PRPF4-203ENST00000488937 TJP1Q07157 1748 aa1.09□□□□□ -2.23
PRPF4-203ENST00000488937 SFTA3P0C7M3 94 aa1.09□□□□□ -2.23
PRPF4-203ENST00000488937 COX7BP24311 80 aa1.09□□□□□ -2.23
PRPF4-203ENST00000488937 WFDC9Q8NEX5 89 aa1.09□□□□□ -2.23
PRPF4-203ENST00000488937 ABCA12Q86UK0 2595 aa1.09□□□□□ -2.24
PRPF4-203ENST00000488937 USP34Q70CQ2 3546 aa1.09□□□□□ -2.24
PRPF4-203ENST00000488937 SPTAN1Q13813 2472 aaKnown RBP1.09□□□□□ -2.24
PRPF4-203ENST00000488937 CEP295Q9C0D2 2601 aa1.08□□□□□ -2.24
PRPF4-203ENST00000488937 DOPEY1Q5JWR5 2465 aa1.08□□□□□ -2.24
PRPF4-203ENST00000488937 ATXN8Q156A1 80 aa1.08□□□□□ -2.24
PRPF4-203ENST00000488937 TEX15Q9BXT5 2789 aa1.08□□□□□ -2.24
PRPF4-203ENST00000488937 LY75O60449 1722 aa1.08□□□□□ -2.24
PRPF4-203ENST00000488937 TEP1Q99973 2627 aaKnown RBP1.08□□□□□ -2.24
PRPF4-203ENST00000488937 UBR5O95071 2799 aaPredicted RBP1.08□□□□□ -2.24
PRPF4-203ENST00000488937 ABCA2Q9BZC7 2435 aa1.07□□□□□ -2.24
PRPF4-203ENST00000488937 PIEZO2Q9H5I5 2752 aa1.07□□□□□ -2.24
PRPF4-203ENST00000488937 CNFNQ9BYD5 112 aa1.07□□□□□ -2.24
PRPF4-203ENST00000488937 TP53AIP1Q9HCN2 124 aa1.07□□□□□ -2.24
PRPF4-203ENST00000488937 ITPR3Q14573 2671 aa1.07□□□□□ -2.24
PRPF4-203ENST00000488937 CEP250Q9BV73 2442 aa1.07□□□□□ -2.24
PRPF4-203ENST00000488937 GCC2Q8IWJ2 1684 aa1.07□□□□□ -2.24
PRPF4-203ENST00000488937 SETD2Q9BYW2 2564 aaPredicted RBP1.06□□□□□ -2.24
PRPF4-203ENST00000488937 C4AP0C0L4 1744 aa1.06□□□□□ -2.24
PRPF4-203ENST00000488937 ZZEF1O43149 2961 aa1.06□□□□□ -2.24
PRPF4-203ENST00000488937 EP300Q09472 2414 aaPredicted RBP1.06□□□□□ -2.24
PRPF4-203ENST00000488937 CDH23Q9H251 3354 aa1.06□□□□□ -2.24
PRPF4-203ENST00000488937 MAP1BP46821 2468 aaKnown RBP1.06□□□□□ -2.24
PRPF4-203ENST00000488937 MEGF8Q7Z7M0 2845 aa1.06□□□□□ -2.24
PRPF4-203ENST00000488937 A0A0D9SFI3 127 aa1.06□□□□□ -2.24
PRPF4-203ENST00000488937 HECTD1Q9ULT8 2610 aa1.06□□□□□ -2.24
PRPF4-203ENST00000488937 PLCE1Q9P212 2302 aa1.06□□□□□ -2.24
PRPF4-203ENST00000488937 DDX60LQ5H9U9 1706 aaKnown RBP1.06□□□□□ -2.24
PRPF4-203ENST00000488937 DOPEY2Q9Y3R5 2298 aa1.05□□□□□ -2.24
PRPF4-203ENST00000488937 DNAH12Q6ZR08 3092 aa1.05□□□□□ -2.24
PRPF4-203ENST00000488937 ASPMQ8IZT6 3477 aa1.05□□□□□ -2.24
PRPF4-203ENST00000488937 MTORP42345 2549 aa1.05□□□□□ -2.24
PRPF4-203ENST00000488937 CPSF4LA6NMK7 179 aaKnown RBP1.05□□□□□ -2.24
PRPF4-203ENST00000488937 PRB3Q04118 309 aaPredicted RBP1.05□□□□□ -2.24
PRPF4-203ENST00000488937 FAM103A1Q9BTL3 118 aaKnown RBP1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms