RNA–Protein interactions for RNA: ENST00000488471.1

KIF3A-207, Transcript of kinesin family member 3A, humanhuman

TSL 2

Gene KIF3A, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-207ENST00000488471 Q5VSD8 79 aa1.12□□□□□ -2.23
KIF3A-207ENST00000488471 COL6A6A6NMZ7 2263 aa1.12□□□□□ -2.23
KIF3A-207ENST00000488471 COL14A1Q05707 1796 aaKnown RBP1.11□□□□□ -2.23
KIF3A-207ENST00000488471 ROS1P08922 2347 aa1.11□□□□□ -2.23
KIF3A-207ENST00000488471 CACNA1EQ15878 2313 aa1.11□□□□□ -2.23
KIF3A-207ENST00000488471 IGIPA6NJ69 53 aa1.11□□□□□ -2.23
KIF3A-207ENST00000488471 UGGT1Q9NYU2 1555 aa1.1□□□□□ -2.23
KIF3A-207ENST00000488471 SPRR1AP35321 89 aa1.1□□□□□ -2.23
KIF3A-207ENST00000488471 PRB3Q04118 309 aaPredicted RBP1.1□□□□□ -2.23
KIF3A-207ENST00000488471 CMC2Q9NRP2 79 aa1.1□□□□□ -2.23
KIF3A-207ENST00000488471 TENM1Q9UKZ4 2725 aa1.1□□□□□ -2.23
KIF3A-207ENST00000488471 ITSN2Q9NZM3 1697 aa1.1□□□□□ -2.23
KIF3A-207ENST00000488471 ADCY10Q96PN6 1610 aa1.09□□□□□ -2.23
KIF3A-207ENST00000488471 NDUFA3O95167 84 aa1.09□□□□□ -2.23
KIF3A-207ENST00000488471 CDKN2A-AS1Q9UH64 79 aa1.09□□□□□ -2.23
KIF3A-207ENST00000488471 EFCAB6Q5THR3 1501 aa1.09□□□□□ -2.24
KIF3A-207ENST00000488471 NRAPQ86VF7 1730 aa1.09□□□□□ -2.24
KIF3A-207ENST00000488471 TSC2P49815 1807 aa1.08□□□□□ -2.24
KIF3A-207ENST00000488471 NESP48681 1621 aa1.08□□□□□ -2.24
KIF3A-207ENST00000488471 PRH1P02810 166 aa1.08□□□□□ -2.24
KIF3A-207ENST00000488471 PLNP26678 52 aa1.08□□□□□ -2.24
KIF3A-207ENST00000488471 PRO3102Q9H379 93 aa1.08□□□□□ -2.24
KIF3A-207ENST00000488471 ASH1LQ9NR48 2969 aaKnown RBP1.08□□□□□ -2.24
KIF3A-207ENST00000488471 SPRR1BP22528 89 aa1.07□□□□□ -2.24
KIF3A-207ENST00000488471 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.07□□□□□ -2.24
KIF3A-207ENST00000488471 APLNQ9ULZ1 77 aa1.06□□□□□ -2.24
KIF3A-207ENST00000488471 H0YGX0 51 aa1.05□□□□□ -2.24
KIF3A-207ENST00000488471 TOMM5Q8N4H5 51 aa1.05□□□□□ -2.24
KIF3A-207ENST00000488471 LY75O60449 1722 aa1.04□□□□□ -2.24
KIF3A-207ENST00000488471 LYNX1G3V0Z9 82 aa1.04□□□□□ -2.24
KIF3A-207ENST00000488471 LINC00158P58513 81 aa1.04□□□□□ -2.24
KIF3A-207ENST00000488471 H1FX-AS1Q4G0G2 97 aa1.04□□□□□ -2.24
KIF3A-207ENST00000488471 DEFB105AQ8NG35 78 aa1.04□□□□□ -2.24
KIF3A-207ENST00000488471 LELP1Q5T871 98 aa1.03□□□□□ -2.24
KIF3A-207ENST00000488471 BIVM-ERCC5R4GMW8 1640 aa1.03□□□□□ -2.24
KIF3A-207ENST00000488471 DOPEY2Q9Y3R5 2298 aa1.03□□□□□ -2.25
KIF3A-207ENST00000488471 H0YAA0 97 aa1.02□□□□□ -2.25
KIF3A-207ENST00000488471 CROCC2H7BZ55 1655 aa1.02□□□□□ -2.25
KIF3A-207ENST00000488471 AGLP35573 1532 aa1.02□□□□□ -2.25
KIF3A-207ENST00000488471 CNOT1A5YKK6 2376 aaKnown RBP1.01□□□□□ -2.25
KIF3A-207ENST00000488471 SPTBN2O15020 2390 aa1.01□□□□□ -2.25
KIF3A-207ENST00000488471 C2CD3Q4AC94 2353 aa1.01□□□□□ -2.25
KIF3A-207ENST00000488471 PTPRZ1P23471 2315 aaPredicted RBP1.01□□□□□ -2.25
KIF3A-207ENST00000488471 C3P01024 1663 aa1.01□□□□□ -2.25
KIF3A-207ENST00000488471 TNRC6CQ9HCJ0 1690 aaKnown RBP1.01□□□□□ -2.25
KIF3A-207ENST00000488471 SMIM27A0A1W2PRY6 76 aa1.01□□□□□ -2.25
KIF3A-207ENST00000488471 WFDC13Q8IUB5 93 aa1.01□□□□□ -2.25
KIF3A-207ENST00000488471 ABRACLQ9P1F3 81 aa1.01□□□□□ -2.25
KIF3A-207ENST00000488471 ABCC8Q09428 1581 aa1□□□□□ -2.25
KIF3A-207ENST00000488471 PLCE1Q9P212 2302 aa1□□□□□ -2.25
KIF3A-207ENST00000488471 LINC01546A6NGU7 62 aa1□□□□□ -2.25
KIF3A-207ENST00000488471 SPINK4O60575 86 aa1□□□□□ -2.25
KIF3A-207ENST00000488471 PTPRQQ9UMZ3 2332 aa1□□□□□ -2.25
KIF3A-207ENST00000488471 TJP1Q07157 1748 aa1□□□□□ -2.25
KIF3A-207ENST00000488471 USF3Q68DE3 2245 aa0.99□□□□□ -2.25
KIF3A-207ENST00000488471 DDX60LQ5H9U9 1706 aaKnown RBP0.99□□□□□ -2.25
KIF3A-207ENST00000488471 TMEM167BQ9NRX6 74 aa0.99□□□□□ -2.25
KIF3A-207ENST00000488471 CACNA1HO95180 2353 aa0.99□□□□□ -2.25
KIF3A-207ENST00000488471 PIEZO2Q9H5I5 2752 aa0.98□□□□□ -2.25
KIF3A-207ENST00000488471 ZNF462Q96JM2 2506 aa0.97□□□□□ -2.25
KIF3A-207ENST00000488471 ABCA5Q8WWZ7 1642 aa0.97□□□□□ -2.25
KIF3A-207ENST00000488471 LOC730098B7Z3J9 87 aa0.97□□□□□ -2.25
KIF3A-207ENST00000488471 KLK9Q2XQG4 91 aa0.97□□□□□ -2.25
KIF3A-207ENST00000488471 MINOS1Q5TGZ0 78 aa0.97□□□□□ -2.25
KIF3A-207ENST00000488471 A0A1B0GUL6 1792 aa0.96□□□□□ -2.26
KIF3A-207ENST00000488471 HELZ2Q9BYK8 2649 aaKnown RBP0.96□□□□□ -2.26
KIF3A-207ENST00000488471 KIAA0586Q9BVV6 1533 aa0.96□□□□□ -2.26
KIF3A-207ENST00000488471 DEPDC5O75140 1603 aa0.96□□□□□ -2.26
KIF3A-207ENST00000488471 IAPPP10997 89 aa0.95□□□□□ -2.26
KIF3A-207ENST00000488471 LINC00308Q8TCZ7 52 aa0.95□□□□□ -2.26
KIF3A-207ENST00000488471 DEFB130BP0DP73 79 aa0.94□□□□□ -2.26
KIF3A-207ENST00000488471 DEFB130AP0DP74 79 aa0.94□□□□□ -2.26
KIF3A-207ENST00000488471 C6orf48Q9UBA6 75 aa0.94□□□□□ -2.26
KIF3A-207ENST00000488471 SPTBN1Q01082 2364 aaKnown RBP0.94□□□□□ -2.26
KIF3A-207ENST00000488471 TTC28Q96AY4 2481 aa0.94□□□□□ -2.26
KIF3A-207ENST00000488471 WNK2Q9Y3S1 2297 aa0.92□□□□□ -2.26
KIF3A-207ENST00000488471 MEGF8Q7Z7M0 2845 aa0.92□□□□□ -2.26
KIF3A-207ENST00000488471 DEFB109BQ30KR1 87 aa0.92□□□□□ -2.26
KIF3A-207ENST00000488471 TOP2AP11388 1531 aaKnown RBP0.92□□□□□ -2.26
KIF3A-207ENST00000488471 NRXN3Q9Y4C0 1643 aa0.92□□□□□ -2.26
KIF3A-207ENST00000488471 IQGAP2Q13576 1575 aa0.91□□□□□ -2.26
KIF3A-207ENST00000488471 KRTAP5-10Q6L8G5 202 aa0.91□□□□□ -2.26
KIF3A-207ENST00000488471 TIMM8BQ9Y5J9 83 aaPredicted RBP0.91□□□□□ -2.26
KIF3A-207ENST00000488471 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
KIF3A-207ENST00000488471 RPS27P42677 84 aaKnown RBP0.9□□□□□ -2.27
KIF3A-207ENST00000488471 SPINK6Q6UWN8 80 aa0.9□□□□□ -2.27
KIF3A-207ENST00000488471 RPS27LQ71UM5 84 aaKnown RBP0.9□□□□□ -2.27
KIF3A-207ENST00000488471 BPTFQ12830 3046 aa0.89□□□□□ -2.27
KIF3A-207ENST00000488471 F8P00451 2351 aa0.89□□□□□ -2.27
KIF3A-207ENST00000488471 ANKRD36CQ5JPF3 1778 aa0.88□□□□□ -2.27
KIF3A-207ENST00000488471 ABCA12Q86UK0 2595 aa0.87□□□□□ -2.27
KIF3A-207ENST00000488471 WT1-ASQ06250 92 aa0.87□□□□□ -2.27
KIF3A-207ENST00000488471 PKDREJQ9NTG1 2253 aa0.87□□□□□ -2.27
KIF3A-207ENST00000488471 C4AP0C0L4 1744 aa0.86□□□□□ -2.27
KIF3A-207ENST00000488471 C4BP0C0L5 1744 aa0.86□□□□□ -2.27
KIF3A-207ENST00000488471 POLQO75417 2590 aa0.86□□□□□ -2.27
KIF3A-207ENST00000488471 SMR3AQ99954 134 aa0.86□□□□□ -2.27
KIF3A-207ENST00000488471 SMIM2Q9BVW6 85 aa0.86□□□□□ -2.27
KIF3A-207ENST00000488471 GVINP1Q7Z2Y8 2422 aa0.85□□□□□ -2.27
KIF3A-207ENST00000488471 ZNF292O60281 2723 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms