RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 A0A096LNT2 108 aa2.03□□□□□ -2.08
VPS8-224ENST00000488255 GVQW2A0A096LPI5 108 aaPredicted RBP2.02□□□□□ -2.09
VPS8-224ENST00000488255 CRIP1P50238 77 aa2.02□□□□□ -2.09
VPS8-224ENST00000488255 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
VPS8-224ENST00000488255 CDKN2A-AS1Q9UH64 79 aa2.02□□□□□ -2.09
VPS8-224ENST00000488255 OTOGLQ3ZCN5 2332 aa2.02□□□□□ -2.09
VPS8-224ENST00000488255 PIGYQ3MUY2 71 aa2.01□□□□□ -2.09
VPS8-224ENST00000488255 LINC01590Q5TEZ4 76 aa2.01□□□□□ -2.09
VPS8-224ENST00000488255 ZFHX3Q15911 3703 aa2.01□□□□□ -2.09
VPS8-224ENST00000488255 K7EQZ3 153 aa2□□□□□ -2.09
VPS8-224ENST00000488255 MINOS1Q5TGZ0 78 aa2□□□□□ -2.09
VPS8-224ENST00000488255 KNTC1P50748 2209 aa2□□□□□ -2.09
VPS8-224ENST00000488255 LOC730098B7Z3J9 87 aa1.99□□□□□ -2.09
VPS8-224ENST00000488255 SSC5DA1L4H1 1573 aa1.98□□□□□ -2.09
VPS8-224ENST00000488255 G3V318 75 aa1.98□□□□□ -2.09
VPS8-224ENST00000488255 UNQ6190/PRO20217Q6UXQ8 127 aa1.98□□□□□ -2.09
VPS8-224ENST00000488255 RPS27LQ71UM5 84 aaKnown RBP1.98□□□□□ -2.09
VPS8-224ENST00000488255 PRO3102Q9H379 93 aa1.98□□□□□ -2.09
VPS8-224ENST00000488255 C6orf48Q9UBA6 75 aa1.98□□□□□ -2.09
VPS8-224ENST00000488255 CACNA1CQ13936 2221 aa1.98□□□□□ -2.09
VPS8-224ENST00000488255 TNRC6CQ9HCJ0 1690 aaKnown RBP1.97□□□□□ -2.09
VPS8-224ENST00000488255 POLR2KP53803 58 aaKnown RBP1.97□□□□□ -2.09
VPS8-224ENST00000488255 F5P12259 2224 aa1.97□□□□□ -2.09
VPS8-224ENST00000488255 URB1O60287 2271 aaKnown RBP1.96□□□□□ -2.1
VPS8-224ENST00000488255 Q6ZRN7 208 aaPredicted RBP1.96□□□□□ -2.1
VPS8-224ENST00000488255 MRPL34Q9BQ48 92 aaKnown RBP1.96□□□□□ -2.1
VPS8-224ENST00000488255 DEFB131AP59861 70 aa1.95□□□□□ -2.1
VPS8-224ENST00000488255 TTTY10Q9BZA0 68 aa1.95□□□□□ -2.1
VPS8-224ENST00000488255 BPTFQ12830 3046 aa1.94□□□□□ -2.1
VPS8-224ENST00000488255 RPL37P61927 97 aaKnown RBP1.94□□□□□ -2.1
VPS8-224ENST00000488255 PRCDQ00LT1 54 aa1.94□□□□□ -2.1
VPS8-224ENST00000488255 IGLV5-48A0A075B6I7 105 aa1.93□□□□□ -2.1
VPS8-224ENST00000488255 H3BUA1 57 aa1.93□□□□□ -2.1
VPS8-224ENST00000488255 AHCTF1Q8WYP5 2266 aa1.93□□□□□ -2.1
VPS8-224ENST00000488255 FN1P02751 2386 aaKnown RBP1.93□□□□□ -2.1
VPS8-224ENST00000488255 PRB1P04280 392 aa1.91□□□□□ -2.1
VPS8-224ENST00000488255 DEFB123Q8N688 67 aa1.9□□□□□ -2.11
VPS8-224ENST00000488255 PDE4DIPQ5VU43 2346 aa1.89□□□□□ -2.11
VPS8-224ENST00000488255 RPL39P62891 51 aaKnown RBP1.88□□□□□ -2.11
VPS8-224ENST00000488255 DEFB109BQ30KR1 87 aa1.88□□□□□ -2.11
VPS8-224ENST00000488255 WFDC10BQ8IUB3 73 aa1.88□□□□□ -2.11
VPS8-224ENST00000488255 ASCC3Q8N3C0 2202 aaKnown RBP1.88□□□□□ -2.11
VPS8-224ENST00000488255 ABCA1O95477 2261 aa1.88□□□□□ -2.11
VPS8-224ENST00000488255 SORL1Q92673 2214 aa1.87□□□□□ -2.11
VPS8-224ENST00000488255 ANKRD17O75179 2603 aaKnown RBP1.87□□□□□ -2.11
VPS8-224ENST00000488255 TECTAO75443 2155 aa1.87□□□□□ -2.11
VPS8-224ENST00000488255 PRB3Q04118 309 aaPredicted RBP1.87□□□□□ -2.11
VPS8-224ENST00000488255 PCOTHQ58A44 107 aa1.87□□□□□ -2.11
VPS8-224ENST00000488255 CADP27708 2225 aa1.87□□□□□ -2.11
VPS8-224ENST00000488255 MUC6Q6W4X9 2439 aa1.86□□□□□ -2.11
VPS8-224ENST00000488255 H3BSH0 61 aa1.86□□□□□ -2.11
VPS8-224ENST00000488255 RPL39LQ96EH5 51 aaKnown RBP1.86□□□□□ -2.11
VPS8-224ENST00000488255 CACNA1EQ15878 2313 aa1.85□□□□□ -2.11
VPS8-224ENST00000488255 CNOT1A5YKK6 2376 aaKnown RBP1.85□□□□□ -2.11
VPS8-224ENST00000488255 LYNX1P0DP58 116 aa1.85□□□□□ -2.11
VPS8-224ENST00000488255 WFDC13Q8IUB5 93 aa1.85□□□□□ -2.11
VPS8-224ENST00000488255 DEFB119Q8N690 84 aa1.85□□□□□ -2.11
VPS8-224ENST00000488255 ICE1Q9Y2F5 2266 aa1.84□□□□□ -2.12
VPS8-224ENST00000488255 ASXL3Q9C0F0 2248 aa1.83□□□□□ -2.12
VPS8-224ENST00000488255 M0QY20 66 aa1.83□□□□□ -2.12
VPS8-224ENST00000488255 CRCT1Q9UGL9 99 aa1.83□□□□□ -2.12
VPS8-224ENST00000488255 SPINK9Q5DT21 86 aa1.82□□□□□ -2.12
VPS8-224ENST00000488255 WNK2Q9Y3S1 2297 aa1.81□□□□□ -2.12
VPS8-224ENST00000488255 I3L2K1 104 aa1.81□□□□□ -2.12
VPS8-224ENST00000488255 COX6A2Q02221 97 aa1.81□□□□□ -2.12
VPS8-224ENST00000488255 H1FX-AS1Q4G0G2 97 aa1.81□□□□□ -2.12
VPS8-224ENST00000488255 TMEM167AQ8TBQ9 72 aa1.81□□□□□ -2.12
VPS8-224ENST00000488255 K7EIM0 57 aa1.8□□□□□ -2.12
VPS8-224ENST00000488255 RPS27P42677 84 aaKnown RBP1.8□□□□□ -2.12
VPS8-224ENST00000488255 WT1-ASQ06250 92 aa1.8□□□□□ -2.12
VPS8-224ENST00000488255 KAAG1Q9UBP8 84 aa1.8□□□□□ -2.12
VPS8-224ENST00000488255 KNL1Q8NG31 2342 aa1.8□□□□□ -2.12
VPS8-224ENST00000488255 H0YAA0 97 aa1.79□□□□□ -2.12
VPS8-224ENST00000488255 DEFB103AP81534 67 aa1.79□□□□□ -2.12
VPS8-224ENST00000488255 NOP10Q9NPE3 64 aaKnown RBP1.79□□□□□ -2.12
VPS8-224ENST00000488255 PRO0255Q9UI72 69 aa1.79□□□□□ -2.12
VPS8-224ENST00000488255 Q6ZSA8 131 aa1.78□□□□□ -2.12
VPS8-224ENST00000488255 DEFB106AQ8N104 65 aa1.78□□□□□ -2.12
VPS8-224ENST00000488255 NAV3Q8IVL0 2385 aa1.78□□□□□ -2.12
VPS8-224ENST00000488255 CACNA1BQ00975 2339 aa1.78□□□□□ -2.13
VPS8-224ENST00000488255 J3QKU1 62 aa1.77□□□□□ -2.13
VPS8-224ENST00000488255 KRTAP13-4Q3LI77 160 aa1.77□□□□□ -2.13
VPS8-224ENST00000488255 Q5VSD8 79 aa1.77□□□□□ -2.13
VPS8-224ENST00000488255 TOMM7Q9P0U1 55 aa1.77□□□□□ -2.13
VPS8-224ENST00000488255 BAHCC1Q9P281 2608 aa1.77□□□□□ -2.13
VPS8-224ENST00000488255 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.76□□□□□ -2.13
VPS8-224ENST00000488255 K7EIL1 84 aa1.76□□□□□ -2.13
VPS8-224ENST00000488255 DEFB130BP0DP73 79 aa1.76□□□□□ -2.13
VPS8-224ENST00000488255 DEFB130AP0DP74 79 aa1.76□□□□□ -2.13
VPS8-224ENST00000488255 LEAP2Q969E1 77 aa1.76□□□□□ -2.13
VPS8-224ENST00000488255 DOPEY2Q9Y3R5 2298 aa1.76□□□□□ -2.13
VPS8-224ENST00000488255 FAM208BQ5VWN6 2430 aa1.75□□□□□ -2.13
VPS8-224ENST00000488255 TPRP12270 2363 aaKnown RBP1.75□□□□□ -2.13
VPS8-224ENST00000488255 FLG2Q5D862 2391 aaPredicted RBP1.75□□□□□ -2.13
VPS8-224ENST00000488255 MMP24-AS1A0A0U1RRL7 71 aa1.75□□□□□ -2.13
VPS8-224ENST00000488255 PTPRQQ9UMZ3 2332 aa1.74□□□□□ -2.13
VPS8-224ENST00000488255 APLNQ9ULZ1 77 aa1.74□□□□□ -2.13
VPS8-224ENST00000488255 DEFB105AQ8NG35 78 aa1.73□□□□□ -2.13
VPS8-224ENST00000488255 KRTAP4-1Q9BYQ7 146 aa1.73□□□□□ -2.13
VPS8-224ENST00000488255 CACNA1GO43497 2377 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms