RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 TMEM167BQ9NRX6 74 aa1.33□□□□□ -2.2
RBM28-207ENST00000488249 DUOX1Q9NRD9 1551 aa1.33□□□□□ -2.2
RBM28-207ENST00000488249 SPTY2D1-AS1A0A0U1RR47 76 aa1.32□□□□□ -2.2
RBM28-207ENST00000488249 ANGP03950 147 aaKnown RBP1.32□□□□□ -2.2
RBM28-207ENST00000488249 RPS27LQ71UM5 84 aaKnown RBP1.32□□□□□ -2.2
RBM28-207ENST00000488249 URB1O60287 2271 aaKnown RBP1.31□□□□□ -2.2
RBM28-207ENST00000488249 NDUFA3O95167 84 aa1.31□□□□□ -2.2
RBM28-207ENST00000488249 DEFB103AP81534 67 aa1.31□□□□□ -2.2
RBM28-207ENST00000488249 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
RBM28-207ENST00000488249 DEFB131BA0A096LNP1 70 aa1.3□□□□□ -2.2
RBM28-207ENST00000488249 H0YGX0 51 aa1.3□□□□□ -2.2
RBM28-207ENST00000488249 CRIP1P50238 77 aa1.3□□□□□ -2.2
RBM28-207ENST00000488249 UBE2DNLQ8IWF7 75 aa1.3□□□□□ -2.2
RBM28-207ENST00000488249 CACNA1BQ00975 2339 aa1.29□□□□□ -2.2
RBM28-207ENST00000488249 MRPL33O75394 65 aaKnown RBP1.29□□□□□ -2.2
RBM28-207ENST00000488249 LINC01590Q5TEZ4 76 aa1.29□□□□□ -2.2
RBM28-207ENST00000488249 ARHGAP5-AS1Q96IT6 56 aa1.29□□□□□ -2.2
RBM28-207ENST00000488249 CRIPTQ9P021 101 aa1.29□□□□□ -2.2
RBM28-207ENST00000488249 PKD1L2Q7Z442 2459 aa1.29□□□□□ -2.2
RBM28-207ENST00000488249 TNRC6CQ9HCJ0 1690 aaKnown RBP1.29□□□□□ -2.2
RBM28-207ENST00000488249 KNTC1P50748 2209 aa1.28□□□□□ -2.2
RBM28-207ENST00000488249 PCOTHQ58A44 107 aa1.28□□□□□ -2.2
RBM28-207ENST00000488249 CACNA1AO00555 2505 aa1.28□□□□□ -2.2
RBM28-207ENST00000488249 AHCTF1Q8WYP5 2266 aa1.27□□□□□ -2.21
RBM28-207ENST00000488249 CCL22O00626 93 aa1.27□□□□□ -2.21
RBM28-207ENST00000488249 CDKN2A-AS1Q9UH64 79 aa1.27□□□□□ -2.21
RBM28-207ENST00000488249 GOLGA4Q13439 2230 aaKnown RBP1.27□□□□□ -2.21
RBM28-207ENST00000488249 ZDBF2Q9HCK1 2354 aa1.26□□□□□ -2.21
RBM28-207ENST00000488249 I3L2K1 104 aa1.26□□□□□ -2.21
RBM28-207ENST00000488249 LINC00158P58513 81 aa1.26□□□□□ -2.21
RBM28-207ENST00000488249 PRO3102Q9H379 93 aa1.26□□□□□ -2.21
RBM28-207ENST00000488249 CACNA1EQ15878 2313 aa1.26□□□□□ -2.21
RBM28-207ENST00000488249 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.26□□□□□ -2.211e-12■■■■□ 20.8
RBM28-207ENST00000488249 IAPPP10997 89 aa1.25□□□□□ -2.21
RBM28-207ENST00000488249 Q8IZM0 81 aa1.25□□□□□ -2.21
RBM28-207ENST00000488249 Q9Y3F1 56 aa1.25□□□□□ -2.21
RBM28-207ENST00000488249 CNOT1A5YKK6 2376 aaKnown RBP1.25□□□□□ -2.21
RBM28-207ENST00000488249 LYNX1P0DP58 116 aa1.24□□□□□ -2.21
RBM28-207ENST00000488249 MRPL34Q9BQ48 92 aaKnown RBP1.24□□□□□ -2.21
RBM28-207ENST00000488249 TTTY10Q9BZA0 68 aa1.24□□□□□ -2.21
RBM28-207ENST00000488249 TP53AIP1Q9HCN2 124 aa1.24□□□□□ -2.21
RBM28-207ENST00000488249 BAHCC1Q9P281 2608 aa1.24□□□□□ -2.21
RBM28-207ENST00000488249 K7EQZ3 153 aa1.23□□□□□ -2.21
RBM28-207ENST00000488249 LINC00308Q8TCZ7 52 aa1.23□□□□□ -2.21
RBM28-207ENST00000488249 OTOGLQ3ZCN5 2332 aa1.23□□□□□ -2.21
RBM28-207ENST00000488249 BPTFQ12830 3046 aa1.22□□□□□ -2.21
RBM28-207ENST00000488249 H3BSH0 61 aa1.22□□□□□ -2.21
RBM28-207ENST00000488249 K7EIL1 84 aa1.22□□□□□ -2.21
RBM28-207ENST00000488249 KRTAP12-1P59990 96 aa1.22□□□□□ -2.21
RBM28-207ENST00000488249 PRB3Q04118 309 aaPredicted RBP1.22□□□□□ -2.21
RBM28-207ENST00000488249 TFF3Q07654 80 aa1.22□□□□□ -2.21
RBM28-207ENST00000488249 DEFB123Q8N688 67 aa1.22□□□□□ -2.21
RBM28-207ENST00000488249 CNFNQ9BYD5 112 aa1.22□□□□□ -2.21
RBM28-207ENST00000488249 FLG2Q5D862 2391 aaPredicted RBP1.21□□□□□ -2.22
RBM28-207ENST00000488249 NAV3Q8IVL0 2385 aa1.21□□□□□ -2.22
RBM28-207ENST00000488249 RPS27P42677 84 aaKnown RBP1.21□□□□□ -2.22
RBM28-207ENST00000488249 PRCDQ00LT1 54 aa1.21□□□□□ -2.22
RBM28-207ENST00000488249 COX14Q96I36 57 aa1.21□□□□□ -2.22
RBM28-207ENST00000488249 USMG5Q96IX5 58 aa1.21□□□□□ -2.22
RBM28-207ENST00000488249 SMIM2Q9BVW6 85 aa1.21□□□□□ -2.22
RBM28-207ENST00000488249 FAM208BQ5VWN6 2430 aa1.21□□□□□ -2.22
RBM28-207ENST00000488249 SORL1Q92673 2214 aa1.21□□□□□ -2.22
RBM28-207ENST00000488249 JMJD1CQ15652 2540 aa1.2□□□□□ -2.22
RBM28-207ENST00000488249 LYNX1G3V0Z9 82 aa1.2□□□□□ -2.22
RBM28-207ENST00000488249 H0YAA0 97 aa1.2□□□□□ -2.22
RBM28-207ENST00000488249 H0YGG7 62 aa1.2□□□□□ -2.22
RBM28-207ENST00000488249 PIGYQ3MUY2 71 aa1.2□□□□□ -2.22
RBM28-207ENST00000488249 COX6B2Q6YFQ2 88 aa1.2□□□□□ -2.22
RBM28-207ENST00000488249 C10orf95Q9H7T3 257 aa1.2□□□□□ -2.22
RBM28-207ENST00000488249 COX6A2Q02221 97 aa1.19□□□□□ -2.22
RBM28-207ENST00000488249 CNTRLQ7Z7A1 2325 aa1.19□□□□□ -2.22
RBM28-207ENST00000488249 COL6A6A6NMZ7 2263 aa1.18□□□□□ -2.22
RBM28-207ENST00000488249 J3QKU1 62 aa1.18□□□□□ -2.22
RBM28-207ENST00000488249 NDUFA1O15239 70 aa1.18□□□□□ -2.22
RBM28-207ENST00000488249 LELP1Q5T871 98 aa1.18□□□□□ -2.22
RBM28-207ENST00000488249 MINOS1Q5TGZ0 78 aa1.18□□□□□ -2.22
RBM28-207ENST00000488249 TMEM167AQ8TBQ9 72 aa1.18□□□□□ -2.22
RBM28-207ENST00000488249 MUC6Q6W4X9 2439 aa1.18□□□□□ -2.22
RBM28-207ENST00000488249 DOPEY2Q9Y3R5 2298 aa1.18□□□□□ -2.22
RBM28-207ENST00000488249 CD52P31358 61 aa1.16□□□□□ -2.22
RBM28-207ENST00000488249 POLR2KP53803 58 aaKnown RBP1.16□□□□□ -2.22
RBM28-207ENST00000488249 SPINK9Q5DT21 86 aa1.16□□□□□ -2.22
RBM28-207ENST00000488249 C6orf48Q9UBA6 75 aa1.16□□□□□ -2.22
RBM28-207ENST00000488249 CRCT1Q9UGL9 99 aa1.16□□□□□ -2.22
RBM28-207ENST00000488249 PRO0255Q9UI72 69 aa1.16□□□□□ -2.22
RBM28-207ENST00000488249 DEFB108AA8MXU0 73 aa1.15□□□□□ -2.23
RBM28-207ENST00000488249 K7EIM0 57 aa1.15□□□□□ -2.23
RBM28-207ENST00000488249 STATHP02808 62 aa1.14□□□□□ -2.23
RBM28-207ENST00000488249 WT1-ASQ06250 92 aa1.14□□□□□ -2.23
RBM28-207ENST00000488249 RPL39P5Q59GN2 51 aa1.14□□□□□ -2.23
RBM28-207ENST00000488249 Q6ZSA8 131 aa1.14□□□□□ -2.23
RBM28-207ENST00000488249 PIEZO2Q9H5I5 2752 aa1.13□□□□□ -2.23
RBM28-207ENST00000488249 ALMS1Q8TCU4 4167 aa1.13□□□□□ -2.23
RBM28-207ENST00000488249 DEFB119Q8N690 84 aa1.13□□□□□ -2.23
RBM28-207ENST00000488249 PLCE1Q9P212 2302 aa1.13□□□□□ -2.23
RBM28-207ENST00000488249 PTPRZ1P23471 2315 aaPredicted RBP1.12□□□□□ -2.23
RBM28-207ENST00000488249 M0QY20 66 aa1.12□□□□□ -2.23
RBM28-207ENST00000488249 SPRR1AP35321 89 aa1.12□□□□□ -2.23
RBM28-207ENST00000488249 KLK9Q2XQG4 91 aa1.12□□□□□ -2.23
RBM28-207ENST00000488249 H1FX-AS1Q4G0G2 97 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms