RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 LINC01549A6NIU2 74 aa3.97□□□□□ -1.77
TNFSF4-203ENST00000488053 H7C1H1 209 aa3.97□□□□□ -1.77
TNFSF4-203ENST00000488053 COX7CP15954 63 aa3.97□□□□□ -1.77
TNFSF4-203ENST00000488053 IFI27P40305 119 aaPredicted RBP3.97□□□□□ -1.77
TNFSF4-203ENST00000488053 CXCL5P42830 114 aa3.97□□□□□ -1.77
TNFSF4-203ENST00000488053 UBE2D1P51668 147 aa3.97□□□□□ -1.77
TNFSF4-203ENST00000488053 COX6A2Q02221 97 aa3.97□□□□□ -1.77
TNFSF4-203ENST00000488053 CIRBPQ14011 172 aaKnown RBP3.97□□□□□ -1.77
TNFSF4-203ENST00000488053 ATXN8Q156A1 80 aa3.97□□□□□ -1.77
TNFSF4-203ENST00000488053 LYZL1Q6UWQ5 148 aa3.97□□□□□ -1.77
TNFSF4-203ENST00000488053 C15orf56Q8N910 161 aa3.97□□□□□ -1.77
TNFSF4-203ENST00000488053 SPACA4Q8TDM5 124 aa3.97□□□□□ -1.77
TNFSF4-203ENST00000488053 DPH3P1Q9H4G8 78 aa3.97□□□□□ -1.77
TNFSF4-203ENST00000488053 V9GYY9 64 aa3.97□□□□□ -1.77
TNFSF4-203ENST00000488053 TRAV26-2A0A0B4J265 109 aa3.96□□□□□ -1.78
TNFSF4-203ENST00000488053 TRBV10-2A0A0K0K1G8 114 aa3.96□□□□□ -1.78
TNFSF4-203ENST00000488053 LOC107984640A0A0U1RRK4 108 aa3.96□□□□□ -1.78
TNFSF4-203ENST00000488053 ATOX1O00244 68 aa3.96□□□□□ -1.78
TNFSF4-203ENST00000488053 SRSF9Q13242 221 aaKnown RBP eCLIP3.96□□□□□ -1.78
TNFSF4-203ENST00000488053 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 A0A096LNJ9 63 aa3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 TRAV12-1A0A0B4J245 112 aa3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 TINCRA0A1B0GVN0 87 aa3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 IGKV2-29A2NJV5 120 aaPredicted RBP3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 KRTAP16-1A8MUX0 517 aa3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 NDUFC2-KCTD14E9PQ53 114 aa3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 H3BT86 120 aa3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 TCL1BO95988 128 aa3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 FAM104BQ5XKR9 115 aa3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 C7orf33Q8WU49 177 aa3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 COPS9Q8WXC6 57 aa3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 CHCHD10Q8WYQ3 142 aaPredicted RBP3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 RPL39LQ96EH5 51 aaKnown RBP3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 RNF185Q96GF1 192 aa3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 PLAC8Q9NZF1 115 aa3.95□□□□□ -1.78
TNFSF4-203ENST00000488053 A0A096LNI7 61 aa3.94□□□□□ -1.78
TNFSF4-203ENST00000488053 IGKV2D-26A0A0A0MRZ7 120 aa3.94□□□□□ -1.78
TNFSF4-203ENST00000488053 LOC389332A0A1B0GUA5 103 aa3.94□□□□□ -1.78
TNFSF4-203ENST00000488053 CKS2P33552 79 aa3.94□□□□□ -1.78
TNFSF4-203ENST00000488053 HERVK_113P61574 105 aa3.94□□□□□ -1.78
TNFSF4-203ENST00000488053 PRR3P79522 188 aaKnown RBP3.94□□□□□ -1.78
TNFSF4-203ENST00000488053 LINC00643Q86TS7 51 aa3.94□□□□□ -1.78
TNFSF4-203ENST00000488053 C2orf48Q96LS8 159 aa3.94□□□□□ -1.78
TNFSF4-203ENST00000488053 PRO1854Q9UHT4 67 aa3.94□□□□□ -1.78
TNFSF4-203ENST00000488053 RNF213Q63HN8 5207 aa3.94□□□□□ -1.78
TNFSF4-203ENST00000488053 FAM236AA0A1B0GUQ0 79 aa3.93□□□□□ -1.78
TNFSF4-203ENST00000488053 FAM236BA0A1B0GV22 79 aa3.93□□□□□ -1.78
TNFSF4-203ENST00000488053 D6R8Y8 96 aa3.93□□□□□ -1.78
TNFSF4-203ENST00000488053 COX6CP09669 75 aa3.93□□□□□ -1.78
TNFSF4-203ENST00000488053 XCL1P47992 114 aa3.93□□□□□ -1.78
TNFSF4-203ENST00000488053 SCGB1D4Q6XE38 83 aa3.93□□□□□ -1.78
TNFSF4-203ENST00000488053 PLEKHB2Q96CS7 222 aa3.93□□□□□ -1.78
TNFSF4-203ENST00000488053 TRAV13-1A0A0B4J241 112 aa3.92□□□□□ -1.78
TNFSF4-203ENST00000488053 F8VRH5 84 aa3.92□□□□□ -1.78
TNFSF4-203ENST00000488053 K7EMI3 77 aa3.92□□□□□ -1.78
TNFSF4-203ENST00000488053 NDUFC2O95298 119 aa3.92□□□□□ -1.78
TNFSF4-203ENST00000488053 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
TNFSF4-203ENST00000488053 Q8N8P6 123 aa3.92□□□□□ -1.78
TNFSF4-203ENST00000488053 LPAP08519 4548 aa3.92□□□□□ -1.78
TNFSF4-203ENST00000488053 GVQW2A0A096LPI5 108 aaPredicted RBP3.91□□□□□ -1.78
TNFSF4-203ENST00000488053 A0A0B4J2C4 111 aa3.91□□□□□ -1.78
TNFSF4-203ENST00000488053 SDHAF1A6NFY7 115 aa3.91□□□□□ -1.78
TNFSF4-203ENST00000488053 MRPL51Q4U2R6 128 aaKnown RBP3.91□□□□□ -1.78
TNFSF4-203ENST00000488053 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
TNFSF4-203ENST00000488053 C2orf82Q6UX34 121 aa3.91□□□□□ -1.78
TNFSF4-203ENST00000488053 HRCT1Q6UXD1 115 aa3.91□□□□□ -1.78
TNFSF4-203ENST00000488053 FAM218AQ96MZ4 157 aa3.91□□□□□ -1.78
TNFSF4-203ENST00000488053 A0A0J9YXV3 536 aa3.9□□□□□ -1.79
TNFSF4-203ENST00000488053 TRBV30A0A0K0K1B3 111 aa3.9□□□□□ -1.79
TNFSF4-203ENST00000488053 LINC00959A0A1B0GUT2 108 aa3.9□□□□□ -1.79
TNFSF4-203ENST00000488053 ZNF815PA8K554 130 aa3.9□□□□□ -1.79
TNFSF4-203ENST00000488053 C1orf195Q5TG92 126 aa3.9□□□□□ -1.79
TNFSF4-203ENST00000488053 C5orf38Q86SI9 138 aa3.9□□□□□ -1.79
TNFSF4-203ENST00000488053 MRPL35Q9NZE8 188 aaKnown RBP3.9□□□□□ -1.79
TNFSF4-203ENST00000488053 IGHV1-58A0A0C4DH39 117 aa3.89□□□□□ -1.79
TNFSF4-203ENST00000488053 I3L3M4 83 aa3.89□□□□□ -1.79
TNFSF4-203ENST00000488053 MRPS36P82909 103 aaKnown RBP3.89□□□□□ -1.79
TNFSF4-203ENST00000488053 C4orf26Q17RF5 130 aa3.89□□□□□ -1.79
TNFSF4-203ENST00000488053 C6orf226Q5I0X4 101 aa3.89□□□□□ -1.79
TNFSF4-203ENST00000488053 Q5XG85 94 aa3.89□□□□□ -1.79
TNFSF4-203ENST00000488053 REG3GQ6UW15 175 aa3.89□□□□□ -1.79
TNFSF4-203ENST00000488053 SPINK6Q6UWN8 80 aa3.89□□□□□ -1.79
TNFSF4-203ENST00000488053 Q8NBF4 154 aa3.89□□□□□ -1.79
TNFSF4-203ENST00000488053 CNFNQ9BYD5 112 aa3.89□□□□□ -1.79
TNFSF4-203ENST00000488053 TTTY13Q9BZ97 58 aa3.89□□□□□ -1.79
TNFSF4-203ENST00000488053 LAMTOR3Q9UHA4 124 aa3.89□□□□□ -1.79
TNFSF4-203ENST00000488053 A0A087WZ39 114 aa3.88□□□□□ -1.79
TNFSF4-203ENST00000488053 PFN2P35080 140 aa3.88□□□□□ -1.79
TNFSF4-203ENST00000488053 KRTAP10-8P60410 259 aa3.88□□□□□ -1.79
TNFSF4-203ENST00000488053 NPC2P61916 151 aa3.88□□□□□ -1.79
TNFSF4-203ENST00000488053 SYCNQ0VAF6 134 aa3.88□□□□□ -1.79
TNFSF4-203ENST00000488053 SS18Q15532 418 aa3.88□□□□□ -1.79
TNFSF4-203ENST00000488053 Q1RN00 199 aa3.88□□□□□ -1.79
TNFSF4-203ENST00000488053 ORMDL2Q53FV1 153 aa3.88□□□□□ -1.79
TNFSF4-203ENST00000488053 RNASE13Q5GAN3 156 aaKnown RBP3.88□□□□□ -1.79
TNFSF4-203ENST00000488053 SERP2Q8N6R1 65 aa3.88□□□□□ -1.79
TNFSF4-203ENST00000488053 LINC00474Q9P2X8 69 aa3.88□□□□□ -1.79
TNFSF4-203ENST00000488053 SERP1Q9Y6X1 66 aa3.88□□□□□ -1.79
TNFSF4-203ENST00000488053 IGLV4-69A0A075B6H9 119 aa3.87□□□□□ -1.79
TNFSF4-203ENST00000488053 SMIM26A0A096LP01 95 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms