RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 KRTAP9-2Q9BYQ4 174 aa6.67□□□□□ -1.34
HLA-DMB-261ENST00000487996 PKHD1P08F94 4074 aa6.67□□□□□ -1.34
HLA-DMB-261ENST00000487996 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.67□□□□□ -1.34
HLA-DMB-261ENST00000487996 K7ERJ3 54 aa6.67□□□□□ -1.34
HLA-DMB-261ENST00000487996 Q1RN00 199 aa6.67□□□□□ -1.34
HLA-DMB-261ENST00000487996 KRTAP7-1Q8IUC3 87 aa6.67□□□□□ -1.34
HLA-DMB-261ENST00000487996 C7orf33Q8WU49 177 aa6.67□□□□□ -1.34
HLA-DMB-261ENST00000487996 DNAH5Q8TE73 4624 aa6.67□□□□□ -1.34
HLA-DMB-261ENST00000487996 TRBV10-3A0A0K0K1G6 114 aa6.66□□□□□ -1.34
HLA-DMB-261ENST00000487996 GAGE10A6NGK3 116 aa6.65□□□□□ -1.34
HLA-DMB-261ENST00000487996 UBE2BP63146 152 aa6.65□□□□□ -1.34
HLA-DMB-261ENST00000487996 LINC00167Q96N53 147 aa6.65□□□□□ -1.34
HLA-DMB-261ENST00000487996 PCLOQ9Y6V0 5065 aa6.65□□□□□ -1.35
HLA-DMB-261ENST00000487996 IGLV1-50A0A075B6I6 118 aa6.64□□□□□ -1.35
HLA-DMB-261ENST00000487996 TRAV23DV6A0A075B6W5 121 aa6.64□□□□□ -1.35
HLA-DMB-261ENST00000487996 H7C2G1 150 aa6.64□□□□□ -1.35
HLA-DMB-261ENST00000487996 SCXQ7RTU7 201 aa6.64□□□□□ -1.35
HLA-DMB-261ENST00000487996 FAM30AQ9NZY2 134 aa6.64□□□□□ -1.35
HLA-DMB-261ENST00000487996 PRYO14603 147 aa6.64□□□□□ -1.35
HLA-DMB-261ENST00000487996 PHF5AQ7RTV0 110 aaKnown RBP6.64□□□□□ -1.35
HLA-DMB-261ENST00000487996 CIRBP-AS1Q8TBR5 109 aa6.64□□□□□ -1.35
HLA-DMB-261ENST00000487996 KCNQ1DNQ9H478 68 aa6.64□□□□□ -1.35
HLA-DMB-261ENST00000487996 KRTAP9-6A0A140TA67 174 aa6.63□□□□□ -1.35
HLA-DMB-261ENST00000487996 RPL37AP8A6NKH3 93 aa6.63□□□□□ -1.35
HLA-DMB-261ENST00000487996 COX6CP09669 75 aa6.63□□□□□ -1.35
HLA-DMB-261ENST00000487996 RPL28P46779 137 aaKnown RBP6.63□□□□□ -1.35
HLA-DMB-261ENST00000487996 TSPAN13O95857 204 aa6.62□□□□□ -1.35
HLA-DMB-261ENST00000487996 PSMB2P49721 201 aa6.62□□□□□ -1.35
HLA-DMB-261ENST00000487996 VAMP3Q15836 100 aa6.62□□□□□ -1.35
HLA-DMB-261ENST00000487996 LYRM7Q5U5X0 104 aa6.62□□□□□ -1.35
HLA-DMB-261ENST00000487996 SMIM11BQ8TCY0 68 aa6.62□□□□□ -1.35
HLA-DMB-261ENST00000487996 DIRC1Q969H9 104 aa6.62□□□□□ -1.35
HLA-DMB-261ENST00000487996 ZNF73O43830 326 aaPredicted RBP6.62□□□□□ -1.35
HLA-DMB-261ENST00000487996 C9orf118A6NHY6 69 aa6.61□□□□□ -1.35
HLA-DMB-261ENST00000487996 TAX1BP3O14907 124 aa6.61□□□□□ -1.35
HLA-DMB-261ENST00000487996 REG3GQ6UW15 175 aa6.61□□□□□ -1.35
HLA-DMB-261ENST00000487996 TRBV7-6A0A0J9YX20 115 aa6.6□□□□□ -1.35
HLA-DMB-261ENST00000487996 C6orf99Q4VX62 202 aa6.59□□□□□ -1.35
HLA-DMB-261ENST00000487996 DYNC1H1Q14204 4646 aaKnown RBP6.59□□□□□ -1.35
HLA-DMB-261ENST00000487996 ETDCA0A1B0GVM5 59 aa6.59□□□□□ -1.36
HLA-DMB-261ENST00000487996 H0YGX0 51 aa6.59□□□□□ -1.36
HLA-DMB-261ENST00000487996 H3BUT2 72 aa6.59□□□□□ -1.36
HLA-DMB-261ENST00000487996 TRIAP1O43715 76 aa6.59□□□□□ -1.36
HLA-DMB-261ENST00000487996 SCGB1C2P0DMR2 95 aa6.59□□□□□ -1.36
HLA-DMB-261ENST00000487996 SPRR1AP35321 89 aa6.59□□□□□ -1.36
HLA-DMB-261ENST00000487996 LRP1BQ9NZR2 4599 aa6.59□□□□□ -1.36
HLA-DMB-261ENST00000487996 DNAH8Q96JB1 4490 aa6.58□□□□□ -1.36
HLA-DMB-261ENST00000487996 SNCGO76070 127 aa6.58□□□□□ -1.36
HLA-DMB-261ENST00000487996 CDK2AP2O75956 126 aa6.57□□□□□ -1.36
HLA-DMB-261ENST00000487996 FABP2P12104 132 aa6.57□□□□□ -1.36
HLA-DMB-261ENST00000487996 RYR1P21817 5038 aa6.57□□□□□ -1.36
HLA-DMB-261ENST00000487996 COX7BP24311 80 aa6.56□□□□□ -1.36
HLA-DMB-261ENST00000487996 XGP55808 180 aa6.56□□□□□ -1.36
HLA-DMB-261ENST00000487996 ELOF1P60002 83 aaKnown RBP6.56□□□□□ -1.36
HLA-DMB-261ENST00000487996 A0A1W2PPM0 123 aa6.56□□□□□ -1.36
HLA-DMB-261ENST00000487996 SLC25A20O43772 301 aa6.56□□□□□ -1.36
HLA-DMB-261ENST00000487996 BCE1O60756 84 aa6.56□□□□□ -1.36
HLA-DMB-261ENST00000487996 HAMPP81172 84 aa6.56□□□□□ -1.36
HLA-DMB-261ENST00000487996 SIGMAR1Q99720 223 aa6.56□□□□□ -1.36
HLA-DMB-261ENST00000487996 TRBV20-1A0A075B6N2 111 aa6.55□□□□□ -1.36
HLA-DMB-261ENST00000487996 KRTAP4-16G5E9R7 235 aaPredicted RBP6.55□□□□□ -1.36
HLA-DMB-261ENST00000487996 H0Y9J4 135 aa6.55□□□□□ -1.36
HLA-DMB-261ENST00000487996 Q6ZRX8 168 aa6.55□□□□□ -1.36
HLA-DMB-261ENST00000487996 FAM19A1Q7Z5A9 133 aa6.55□□□□□ -1.36
HLA-DMB-261ENST00000487996 NAA38Q9BRA0 125 aaKnown RBP6.55□□□□□ -1.36
HLA-DMB-261ENST00000487996 PSORS1C2Q9UIG4 136 aa6.55□□□□□ -1.36
HLA-DMB-261ENST00000487996 A0A1B0GX51 115 aa6.54□□□□□ -1.36
HLA-DMB-261ENST00000487996 INAFM2P0DMQ5 153 aa6.54□□□□□ -1.36
HLA-DMB-261ENST00000487996 UBE2AP49459 152 aa6.54□□□□□ -1.36
HLA-DMB-261ENST00000487996 C1orf137Q5JT78 98 aa6.54□□□□□ -1.36
HLA-DMB-261ENST00000487996 KRTAP11-1Q8IUC1 163 aa6.54□□□□□ -1.36
HLA-DMB-261ENST00000487996 DHRS4-AS1Q9P1J3 65 aa6.54□□□□□ -1.36
HLA-DMB-261ENST00000487996 ABCA13Q86UQ4 5058 aa6.53□□□□□ -1.36
HLA-DMB-261ENST00000487996 B5MCH6 92 aa6.53□□□□□ -1.36
HLA-DMB-261ENST00000487996 C5orf47Q569G3 176 aa6.53□□□□□ -1.36
HLA-DMB-261ENST00000487996 KRTAP4-12Q9BQ66 201 aa6.53□□□□□ -1.36
HLA-DMB-261ENST00000487996 ATXN8Q156A1 80 aa6.53□□□□□ -1.36
HLA-DMB-261ENST00000487996 LINC00575Q6W349 94 aa6.52□□□□□ -1.37
HLA-DMB-261ENST00000487996 hADV29S1A0JD25 119 aa6.51□□□□□ -1.37
HLA-DMB-261ENST00000487996 DNAL4O96015 105 aa6.51□□□□□ -1.37
HLA-DMB-261ENST00000487996 SPCS1Q9Y6A9 102 aa6.51□□□□□ -1.37
HLA-DMB-261ENST00000487996 LST1O00453 97 aa6.5□□□□□ -1.37
HLA-DMB-261ENST00000487996 RPL37AP61513 92 aaKnown RBP6.5□□□□□ -1.37
HLA-DMB-261ENST00000487996 PRLHP81277 87 aa6.5□□□□□ -1.37
HLA-DMB-261ENST00000487996 GTF2H5Q6ZYL4 71 aa6.5□□□□□ -1.37
HLA-DMB-261ENST00000487996 CLEC2BQ92478 149 aa6.5□□□□□ -1.37
HLA-DMB-261ENST00000487996 ZNF861PO60384 105 aa6.5□□□□□ -1.37
HLA-DMB-261ENST00000487996 TRACP01848 142 aa6.5□□□□□ -1.37
HLA-DMB-261ENST00000487996 IGLV7-43P04211 117 aa6.5□□□□□ -1.37
HLA-DMB-261ENST00000487996 APOBP04114 4563 aaKnown RBP6.49□□□□□ -1.37
HLA-DMB-261ENST00000487996 TCL1BO95988 128 aa6.49□□□□□ -1.37
HLA-DMB-261ENST00000487996 KRTAP13-1Q8IUC0 172 aa6.49□□□□□ -1.37
HLA-DMB-261ENST00000487996 HIGD2AQ9BW72 106 aa6.49□□□□□ -1.37
HLA-DMB-261ENST00000487996 SS18L2Q9UHA2 77 aa6.49□□□□□ -1.37
HLA-DMB-261ENST00000487996 SMR3BP02814 79 aaPredicted RBP6.48□□□□□ -1.37
HLA-DMB-261ENST00000487996 FAM218AQ96MZ4 157 aa6.48□□□□□ -1.37
HLA-DMB-261ENST00000487996 Q9BRP9 147 aa6.48□□□□□ -1.37
HLA-DMB-261ENST00000487996 H3BQ85 93 aa6.47□□□□□ -1.37
HLA-DMB-261ENST00000487996 K7EP34 96 aa6.47□□□□□ -1.37
HLA-DMB-261ENST00000487996 PLA2G1BP04054 148 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms